RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 BMP6P22004 513 aa12.98□□□□□ -0.33
TNPO1-213ENST00000523768 SARSP49591 514 aaKnown RBP12.98□□□□□ -0.33
TNPO1-213ENST00000523768 UBASH3AP57075 661 aa12.98□□□□□ -0.33
TNPO1-213ENST00000523768 GRIN1Q05586 938 aa12.98□□□□□ -0.33
TNPO1-213ENST00000523768 FUT2Q10981 343 aa12.98□□□□□ -0.33
TNPO1-213ENST00000523768 ENAHQ8N8S7 591 aaPredicted RBP12.98□□□□□ -0.33
TNPO1-213ENST00000523768 TRMT1Q9NXH9 659 aaKnown RBP12.98□□□□□ -0.33
TNPO1-213ENST00000523768 PRPF3O43395 683 aaKnown RBP12.98□□□□□ -0.33
TNPO1-213ENST00000523768 POSTNQ15063 836 aa12.98□□□□□ -0.33
TNPO1-213ENST00000523768 PKN1Q16512 942 aa12.98□□□□□ -0.33
TNPO1-213ENST00000523768 FBXO33Q7Z6M2 555 aa12.98□□□□□ -0.33
TNPO1-213ENST00000523768 OXER1Q8TDS5 423 aa12.98□□□□□ -0.33
TNPO1-213ENST00000523768 ZNF384Q8TF68 577 aa12.98□□□□□ -0.33
TNPO1-213ENST00000523768 SCN7AQ01118 1682 aa12.98□□□□□ -0.33
TNPO1-213ENST00000523768 PDS5AQ29RF7 1337 aaKnown RBP12.97□□□□□ -0.33
TNPO1-213ENST00000523768 WTIPA6NIX2 430 aaPredicted RBP12.97□□□□□ -0.33
TNPO1-213ENST00000523768 KCNQ2O43526 872 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 DYNLL1P63167 89 aaKnown RBP12.97□□□□□ -0.33
TNPO1-213ENST00000523768 AKAP17AQ02040 695 aaKnown RBP12.97□□□□□ -0.33
TNPO1-213ENST00000523768 SPECC1Q5M775 1068 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 KANK3Q6NY19 840 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 TRIML1Q8N9V2 468 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 KIF18AQ8NI77 898 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 ZNF592Q92610 1267 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 RBM28Q9NW13 759 aaKnown RBP12.97□□□□□ -0.33
TNPO1-213ENST00000523768 MAN1B1Q9UKM7 699 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 SMIM22K7EJ46 135 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 FOXN1O15353 648 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 POLR2DO15514 142 aaKnown RBP12.97□□□□□ -0.33
TNPO1-213ENST00000523768 SERPINC1P01008 464 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 TUBB4AP04350 444 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 CALM1P0DP23 149 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 CALM2P0DP24 149 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 CALM3P0DP25 149 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 CATIPQ7Z7H3 387 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 IQCA1Q86XH1 822 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 MLKLQ8NB16 471 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 LINC00116Q8NCU8 138 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 DPF2Q92785 391 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 SHISA4Q96DD7 197 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 PHF20Q9BVI0 1012 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 CABP5Q9NP86 173 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 SERTAD1Q9UHV2 236 aa12.97□□□□□ -0.33
TNPO1-213ENST00000523768 PDE4BQ07343 736 aa12.96□□□□□ -0.33
TNPO1-213ENST00000523768 IFIT1BQ5T764 474 aaKnown RBP12.96□□□□□ -0.33
TNPO1-213ENST00000523768 VSTM4Q8IW00 320 aa12.96□□□□□ -0.33
TNPO1-213ENST00000523768 SPATA20Q8TB22 786 aa12.96□□□□□ -0.33
TNPO1-213ENST00000523768 TMX1Q9H3N1 280 aa12.96□□□□□ -0.33
TNPO1-213ENST00000523768 FANCLQ9NW38 375 aa12.96□□□□□ -0.33
TNPO1-213ENST00000523768 CNTNAP4Q9C0A0 1308 aa12.96□□□□□ -0.33
TNPO1-213ENST00000523768 ACTN4O43707 911 aaKnown RBP12.96□□□□□ -0.33
TNPO1-213ENST00000523768 TROAPQ12815 778 aa12.96□□□□□ -0.33
TNPO1-213ENST00000523768 MORC3Q14149 939 aa12.96□□□□□ -0.33
TNPO1-213ENST00000523768 PPP4R3BQ5MIZ7 849 aa12.96□□□□□ -0.33
TNPO1-213ENST00000523768 CTR9Q6PD62 1173 aa12.96□□□□□ -0.33
TNPO1-213ENST00000523768 CELF1Q92879 486 aaKnown RBP12.96□□□□□ -0.33
TNPO1-213ENST00000523768 PPP1R13BQ96KQ4 1090 aa12.96□□□□□ -0.33
TNPO1-213ENST00000523768 AATFQ9NY61 560 aaKnown RBP eCLIP12.96□□□□□ -0.33
TNPO1-213ENST00000523768 DACH1Q9UI36 760 aa12.96□□□□□ -0.33
TNPO1-213ENST00000523768 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.96□□□□□ -0.33
TNPO1-213ENST00000523768 MYH6P13533 1939 aa12.96□□□□□ -0.34
TNPO1-213ENST00000523768 DLEC1Q9Y238 1755 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 TRIM75PA6NK02 468 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 ZBTB22O15209 634 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 DDAH1O94760 285 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 KRT2P35908 639 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 CFAP100Q494V2 611 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 ENOX1Q8TC92 643 aaKnown RBP12.95□□□□□ -0.34
TNPO1-213ENST00000523768 SMARCE1Q969G3 411 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 NSUN4Q96CB9 384 aaKnown RBP12.95□□□□□ -0.34
TNPO1-213ENST00000523768 MYH2Q9UKX2 1941 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 CASZ1Q86V15 1759 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 CYP2D7A0A087X1C5 515 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 ORC4O43929 436 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 BMP15O95972 392 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 PRR29P0C7W0 189 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 TMED8Q6PL24 325 aaPredicted RBP12.95□□□□□ -0.34
TNPO1-213ENST00000523768 CSRNP2Q9H175 543 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 VPS54Q9P1Q0 977 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 TAF1P21675 1872 aa12.95□□□□□ -0.34
TNPO1-213ENST00000523768 CCP110O43303 1012 aa12.94□□□□□ -0.34
TNPO1-213ENST00000523768 ZNF18P17022 549 aa12.94□□□□□ -0.34
TNPO1-213ENST00000523768 BAZ2AQ9UIF9 1905 aaKnown RBP12.94□□□□□ -0.34
TNPO1-213ENST00000523768 USP17L12C9JPN9 530 aa12.94□□□□□ -0.34
TNPO1-213ENST00000523768 USP17L21D6R901 530 aa12.94□□□□□ -0.34
TNPO1-213ENST00000523768 PLEKHA8P1O95397 391 aa12.94□□□□□ -0.34
TNPO1-213ENST00000523768 RPS8P62241 208 aaKnown RBP12.94□□□□□ -0.34
TNPO1-213ENST00000523768 CT47A1Q5JQC4 288 aaPredicted RBP12.94□□□□□ -0.34
TNPO1-213ENST00000523768 TBC1D9BQ66K14 1250 aa12.94□□□□□ -0.34
TNPO1-213ENST00000523768 TMTC3Q6ZXV5 915 aa12.94□□□□□ -0.34
TNPO1-213ENST00000523768 NYXQ9GZU5 481 aa12.94□□□□□ -0.34
TNPO1-213ENST00000523768 V9GY48 417 aaPredicted RBP12.94□□□□□ -0.34
TNPO1-213ENST00000523768 TOP1P11387 765 aaKnown RBP12.93□□□□□ -0.34
TNPO1-213ENST00000523768 GTF2E1P29083 439 aaPredicted RBP12.93□□□□□ -0.34
TNPO1-213ENST00000523768 MECOMQ03112 1051 aa12.93□□□□□ -0.34
TNPO1-213ENST00000523768 USP49Q70CQ1 688 aa12.93□□□□□ -0.34
TNPO1-213ENST00000523768 TNFRSF25Q93038 417 aa12.93□□□□□ -0.34
TNPO1-213ENST00000523768 CCDC34Q96HJ3 373 aa12.93□□□□□ -0.34
TNPO1-213ENST00000523768 ARID3AQ99856 593 aa12.93□□□□□ -0.34
TNPO1-213ENST00000523768 ANKRD2Q9GZV1 360 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms