RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 JAG1P78504 1218 aa12.14□□□□□ -0.47
LAMA4-220ENST00000523765 PICALMQ13492 652 aa12.14□□□□□ -0.47
LAMA4-220ENST00000523765 SHROOM1Q2M3G4 852 aaPredicted RBP12.14□□□□□ -0.47
LAMA4-220ENST00000523765 TJAP1Q5JTD0 557 aa12.14□□□□□ -0.47
LAMA4-220ENST00000523765 SLC4A10Q6U841 1118 aa12.14□□□□□ -0.47
LAMA4-220ENST00000523765 WDR66Q8TBY9 1149 aa12.14□□□□□ -0.47
LAMA4-220ENST00000523765 SYMPKQ92797 1274 aaKnown RBP12.14□□□□□ -0.47
LAMA4-220ENST00000523765 P2RX7Q99572 595 aaKnown RBP12.14□□□□□ -0.47
LAMA4-220ENST00000523765 FLRT1Q9NZU1 646 aa12.14□□□□□ -0.47
LAMA4-220ENST00000523765 PNMA3Q9UL41 463 aa12.14□□□□□ -0.47
LAMA4-220ENST00000523765 TMEM265A0A087WTH1 108 aa12.13□□□□□ -0.47
LAMA4-220ENST00000523765 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
LAMA4-220ENST00000523765 LDHBP07195 334 aaKnown RBP12.13□□□□□ -0.47
LAMA4-220ENST00000523765 CHRM1P11229 460 aaPredicted RBP12.13□□□□□ -0.47
LAMA4-220ENST00000523765 ZKSCAN1P17029 563 aaPredicted RBP12.13□□□□□ -0.47
LAMA4-220ENST00000523765 EXOSC9Q06265 439 aaKnown RBP12.13□□□□□ -0.47
LAMA4-220ENST00000523765 GRIN2CQ14957 1233 aa12.13□□□□□ -0.47
LAMA4-220ENST00000523765 RABL6Q3YEC7 729 aaPredicted RBP12.13□□□□□ -0.47
LAMA4-220ENST00000523765 SH3RF1Q7Z6J0 888 aa12.13□□□□□ -0.47
LAMA4-220ENST00000523765 BADQ92934 168 aa12.13□□□□□ -0.47
LAMA4-220ENST00000523765 NUDT12Q9BQG2 462 aa12.13□□□□□ -0.47
LAMA4-220ENST00000523765 PCDHB13Q9Y5F0 798 aa12.13□□□□□ -0.47
LAMA4-220ENST00000523765 GAKO14976 1311 aa12.12□□□□□ -0.47
LAMA4-220ENST00000523765 ZBED9Q6R2W3 1325 aa12.12□□□□□ -0.47
LAMA4-220ENST00000523765 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
LAMA4-220ENST00000523765 XRCC5P13010 732 aaKnown RBP12.12□□□□□ -0.47
LAMA4-220ENST00000523765 EPHB4P54760 987 aa12.12□□□□□ -0.47
LAMA4-220ENST00000523765 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
LAMA4-220ENST00000523765 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
LAMA4-220ENST00000523765 MORN1Q5T089 497 aa12.12□□□□□ -0.47
LAMA4-220ENST00000523765 ZNF280CQ8ND82 737 aa12.12□□□□□ -0.47
LAMA4-220ENST00000523765 RBPJLQ9UBG7 517 aa12.12□□□□□ -0.47
LAMA4-220ENST00000523765 ATP11BQ9Y2G3 1177 aa12.12□□□□□ -0.47
LAMA4-220ENST00000523765 NDUFB9Q9Y6M9 179 aa12.12□□□□□ -0.47
LAMA4-220ENST00000523765 UTYO14607 1347 aa12.11□□□□□ -0.47
LAMA4-220ENST00000523765 ALDH1L1O75891 902 aa12.11□□□□□ -0.47
LAMA4-220ENST00000523765 IFIT1P09914 478 aaKnown RBP12.11□□□□□ -0.47
LAMA4-220ENST00000523765 ITGB8P26012 769 aa12.11□□□□□ -0.47
LAMA4-220ENST00000523765 PHKA1P46020 1223 aa12.11□□□□□ -0.47
LAMA4-220ENST00000523765 RFX5P48382 616 aaPredicted RBP12.11□□□□□ -0.47
LAMA4-220ENST00000523765 SMAD3P84022 425 aaKnown RBP12.11□□□□□ -0.47
LAMA4-220ENST00000523765 CCDC184Q52MB2 194 aa12.11□□□□□ -0.47
LAMA4-220ENST00000523765 SH3D19Q5HYK7 790 aa12.11□□□□□ -0.47
LAMA4-220ENST00000523765 ATG9AQ7Z3C6 839 aa12.11□□□□□ -0.47
LAMA4-220ENST00000523765 TRPV1Q8NER1 839 aa12.11□□□□□ -0.47
LAMA4-220ENST00000523765 ZNF384Q8TF68 577 aa12.11□□□□□ -0.47
LAMA4-220ENST00000523765 SLC39A7Q92504 469 aa12.11□□□□□ -0.47
LAMA4-220ENST00000523765 FAM122AQ96E09 287 aa12.11□□□□□ -0.47
LAMA4-220ENST00000523765 SRCIN1Q9C0H9 1055 aa12.11□□□□□ -0.47
LAMA4-220ENST00000523765 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
LAMA4-220ENST00000523765 RHBDL3P58872 404 aa12.1□□□□□ -0.47
LAMA4-220ENST00000523765 HERVK_113P62684 666 aa12.1□□□□□ -0.47
LAMA4-220ENST00000523765 MTMR2Q13614 643 aa12.1□□□□□ -0.47
LAMA4-220ENST00000523765 GJC2Q5T442 439 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-220ENST00000523765 GPR142Q7Z601 462 aa12.1□□□□□ -0.47
LAMA4-220ENST00000523765 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-220ENST00000523765 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.1□□□□□ -0.47
LAMA4-220ENST00000523765 PRDM5Q9NQX1 630 aaPredicted RBP12.1□□□□□ -0.47
LAMA4-220ENST00000523765 SALL1Q9NSC2 1324 aa12.1□□□□□ -0.47
LAMA4-220ENST00000523765 CDK5RAP2Q96SN8 1893 aa12.09□□□□□ -0.47
LAMA4-220ENST00000523765 TBC1D12O60347 775 aa12.09□□□□□ -0.47
LAMA4-220ENST00000523765 C7P10643 843 aa12.09□□□□□ -0.47
LAMA4-220ENST00000523765 BTDP43251 543 aa12.09□□□□□ -0.47
LAMA4-220ENST00000523765 MAP3K12Q12852 859 aa12.09□□□□□ -0.47
LAMA4-220ENST00000523765 ANO1Q5XXA6 986 aa12.09□□□□□ -0.47
LAMA4-220ENST00000523765 GPRC5AQ8NFJ5 357 aa12.09□□□□□ -0.47
LAMA4-220ENST00000523765 SOCS4Q8WXH5 440 aa12.09□□□□□ -0.47
LAMA4-220ENST00000523765 PPM1EQ8WY54 764 aa12.09□□□□□ -0.47
LAMA4-220ENST00000523765 LPIN2Q92539 896 aa12.09□□□□□ -0.47
LAMA4-220ENST00000523765 CNMDO75829 334 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 SLC5A1P13866 664 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 ADORA1P30542 326 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 CAP2P40123 477 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 RGS2P41220 211 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 ERVK-9P63128 1117 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 ERVK-24P63145 666 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 CCDC27Q2M243 656 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 TRIM60Q495X7 471 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 NECAB3Q96P71 396 aaPredicted RBP12.08□□□□□ -0.48
LAMA4-220ENST00000523765 APBA2Q99767 749 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 PAGR1Q9BTK6 254 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 OSBPL5Q9H0X9 879 aaPredicted RBP12.08□□□□□ -0.48
LAMA4-220ENST00000523765 PDLIM7Q9NR12 457 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 DDX20Q9UHI6 824 aaKnown RBP12.08□□□□□ -0.48
LAMA4-220ENST00000523765 PLXNA1Q9UIW2 1896 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 IL16Q14005 1332 aa12.08□□□□□ -0.48
LAMA4-220ENST00000523765 TCF20Q9UGU0 1960 aaKnown RBP12.07□□□□□ -0.48
LAMA4-220ENST00000523765 USP17L5A8MUK1 530 aa12.07□□□□□ -0.48
LAMA4-220ENST00000523765 EYA2O00167 538 aa12.07□□□□□ -0.48
LAMA4-220ENST00000523765 CNGA1P29973 690 aa12.07□□□□□ -0.48
LAMA4-220ENST00000523765 HOXA7P31268 230 aaPredicted RBP12.07□□□□□ -0.48
LAMA4-220ENST00000523765 CYP2C19P33261 490 aa12.07□□□□□ -0.48
LAMA4-220ENST00000523765 IRX3P78415 501 aaPredicted RBP12.07□□□□□ -0.48
LAMA4-220ENST00000523765 PABPC4Q13310 644 aaKnown RBP eCLIP12.07□□□□□ -0.48
LAMA4-220ENST00000523765 PDE3AQ14432 1141 aa12.07□□□□□ -0.48
LAMA4-220ENST00000523765 SLC39A5Q6ZMH5 540 aa12.07□□□□□ -0.48
LAMA4-220ENST00000523765 PLEKHH3Q7Z736 793 aa12.07□□□□□ -0.48
LAMA4-220ENST00000523765 NPLOC4Q8TAT6 608 aa12.07□□□□□ -0.48
LAMA4-220ENST00000523765 ADAMTS19Q8TE59 1207 aa12.07□□□□□ -0.48
LAMA4-220ENST00000523765 LPAR1Q92633 364 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms