RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 EIF6P56537 245 aaKnown RBP6.95□□□□□ -1.3
PABPC1-223ENST00000523636 LRIT3Q3SXY7 679 aa6.95□□□□□ -1.3
PABPC1-223ENST00000523636 C4orf17Q53FE4 359 aa6.95□□□□□ -1.3
PABPC1-223ENST00000523636 NBPF10Q6P3W6 841 aaKnown RBP6.95□□□□□ -1.3
PABPC1-223ENST00000523636 MYO19Q96H55 970 aa6.95□□□□□ -1.3
PABPC1-223ENST00000523636 PSMD1Q99460 953 aa6.95□□□□□ -1.3
PABPC1-223ENST00000523636 GDF15Q99988 308 aa6.95□□□□□ -1.3
PABPC1-223ENST00000523636 SENP2Q9HC62 589 aa6.95□□□□□ -1.3
PABPC1-223ENST00000523636 ZDHHC3Q9NYG2 299 aa6.95□□□□□ -1.3
PABPC1-223ENST00000523636 GPC6Q9Y625 555 aaPredicted RBP6.95□□□□□ -1.3
PABPC1-223ENST00000523636 CHD6Q8TD26 2715 aa6.95□□□□□ -1.3
PABPC1-223ENST00000523636 SSC5DA1L4H1 1573 aa6.95□□□□□ -1.3
PABPC1-223ENST00000523636 A0A1W2PP64 1363 aa6.95□□□□□ -1.3
PABPC1-223ENST00000523636 RTL1A6NKG5 1358 aa6.95□□□□□ -1.3
PABPC1-223ENST00000523636 ST8SIA5O15466 376 aa6.94□□□□□ -1.3
PABPC1-223ENST00000523636 GMPSP49915 693 aaPredicted RBP6.94□□□□□ -1.3
PABPC1-223ENST00000523636 RRS1Q15050 365 aaKnown RBP6.94□□□□□ -1.3
PABPC1-223ENST00000523636 C2orf69Q8N8R5 385 aa6.94□□□□□ -1.3
PABPC1-223ENST00000523636 KIFC2Q96AC6 838 aa6.94□□□□□ -1.3
PABPC1-223ENST00000523636 MKNK1Q9BUB5 465 aa6.94□□□□□ -1.3
PABPC1-223ENST00000523636 ZNF232Q9UNY5 417 aa6.94□□□□□ -1.3
PABPC1-223ENST00000523636 ZBTB1Q9Y2K1 713 aa6.94□□□□□ -1.3
PABPC1-223ENST00000523636 TONSLQ96HA7 1378 aa6.94□□□□□ -1.3
PABPC1-223ENST00000523636 SETXQ7Z333 2677 aaKnown RBP6.94□□□□□ -1.3
PABPC1-223ENST00000523636 EDC4Q6P2E9 1401 aaKnown RBP6.93□□□□□ -1.3
PABPC1-223ENST00000523636 CHD9Q3L8U1 2897 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 TRANK1O15050 2925 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 SCNN1AP37088 669 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 ZEB1P37275 1124 aaPredicted RBP6.93□□□□□ -1.3
PABPC1-223ENST00000523636 PLA2G4AP47712 749 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 AMPHP49418 695 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 POU4F2Q12837 409 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 RTN1Q16799 776 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.93□□□□□ -1.33e-11■□□□□ 9.8
PABPC1-223ENST00000523636 HSP90AB2PQ58FF8 381 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 C16orf46Q6P387 395 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 MOB2Q70IA6 237 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 PRICKLE2Q7Z3G6 844 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 DNAJC10Q8IXB1 793 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 CD99L2Q8TCZ2 262 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 HELQQ8TDG4 1101 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 GTF3C2Q8WUA4 911 aaPredicted RBP6.93□□□□□ -1.3
PABPC1-223ENST00000523636 SEPT3Q9UH03 358 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 NPC1L1Q9UHC9 1359 aa6.93□□□□□ -1.3
PABPC1-223ENST00000523636 TRIOO75962 3097 aa6.92□□□□□ -1.3
PABPC1-223ENST00000523636 COL2A1P02458 1487 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-223ENST00000523636 WDR87Q6ZQQ6 2873 aa6.92□□□□□ -1.3
PABPC1-223ENST00000523636 A0A1B0GTH6 734 aa6.92□□□□□ -1.3
PABPC1-223ENST00000523636 KLRG2A4D1S0 409 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-223ENST00000523636 SOWAHDA6NJG2 315 aa6.92□□□□□ -1.3
PABPC1-223ENST00000523636 CYP19A1P11511 503 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-223ENST00000523636 BMP8BP34820 402 aa6.92□□□□□ -1.3
PABPC1-223ENST00000523636 SERPINB4P48594 390 aa6.92□□□□□ -1.3
PABPC1-223ENST00000523636 CXCL9Q07325 125 aa6.92□□□□□ -1.3
PABPC1-223ENST00000523636 CAPN12Q6ZSI9 719 aa6.92□□□□□ -1.3
PABPC1-223ENST00000523636 SND1Q7KZF4 910 aaKnown RBP eCLIP6.92□□□□□ -1.3
PABPC1-223ENST00000523636 ALDH16A1Q8IZ83 802 aa6.92□□□□□ -1.3
PABPC1-223ENST00000523636 RTKN2Q8IZC4 609 aa6.92□□□□□ -1.3
PABPC1-223ENST00000523636 JDP2Q8WYK2 163 aa6.92□□□□□ -1.3
PABPC1-223ENST00000523636 DNMT3LQ9UJW3 386 aa6.92□□□□□ -1.3
PABPC1-223ENST00000523636 TAF1P21675 1872 aa6.92□□□□□ -1.3
PABPC1-223ENST00000523636 ATRXP46100 2492 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 CHD7Q9P2D1 2997 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 ICMTO60725 284 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 CLSTN1O94985 981 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 NPR3P17342 541 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 IRX6P78412 446 aaPredicted RBP6.91□□□□□ -1.3
PABPC1-223ENST00000523636 HIF1AQ16665 826 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 SH3PXD2AQ5TCZ1 1133 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 KRT26Q7Z3Y9 468 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 FAM161BQ96MY7 647 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 PHACTR1Q9C0D0 580 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 TIMMDC1Q9NPL8 285 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 DACH1Q9UI36 760 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 PTCH2Q9Y6C5 1203 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 DNMT3AQ9Y6K1 912 aaPredicted RBP6.91□□□□□ -1.3
PABPC1-223ENST00000523636 EVC2Q86UK5 1308 aa6.91□□□□□ -1.3
PABPC1-223ENST00000523636 FIGNL2A6NMB9 653 aa6.9□□□□□ -1.3
PABPC1-223ENST00000523636 ERVV-2B6SEH9 535 aa6.9□□□□□ -1.3
PABPC1-223ENST00000523636 MAN1A2O60476 641 aa6.9□□□□□ -1.3
PABPC1-223ENST00000523636 ABL1P00519 1130 aa6.9□□□□□ -1.3
PABPC1-223ENST00000523636 NAA30Q147X3 362 aaPredicted RBP6.9□□□□□ -1.3
PABPC1-223ENST00000523636 SLC4A8Q2Y0W8 1093 aa6.9□□□□□ -1.3
PABPC1-223ENST00000523636 COX20Q5RI15 118 aa6.9□□□□□ -1.3
PABPC1-223ENST00000523636 IFNL2Q8IZJ0 200 aa6.9□□□□□ -1.3
PABPC1-223ENST00000523636 MAFAQ8NHW3 353 aaPredicted RBP6.9□□□□□ -1.3
PABPC1-223ENST00000523636 TRIM47Q96LD4 638 aa6.9□□□□□ -1.3
PABPC1-223ENST00000523636 P2RX7Q99572 595 aaKnown RBP6.9□□□□□ -1.3
PABPC1-223ENST00000523636 HCN4Q9Y3Q4 1203 aa6.9□□□□□ -1.3
PABPC1-223ENST00000523636 DYRK1BQ9Y463 629 aa6.9□□□□□ -1.3
PABPC1-223ENST00000523636 ASTN2O75129 1339 aaPredicted RBP6.9□□□□□ -1.3
PABPC1-223ENST00000523636 NPR1P16066 1061 aa6.89□□□□□ -1.31
PABPC1-223ENST00000523636 TXLNAP40222 546 aa6.89□□□□□ -1.31
PABPC1-223ENST00000523636 PHKA2P46019 1235 aa6.89□□□□□ -1.31
PABPC1-223ENST00000523636 CCDC27Q2M243 656 aa6.89□□□□□ -1.31
PABPC1-223ENST00000523636 C11orf91Q3C1V1 193 aa6.89□□□□□ -1.31
PABPC1-223ENST00000523636 SAP130Q9H0E3 1048 aa6.89□□□□□ -1.31
PABPC1-223ENST00000523636 IGSF5Q9NSI5 407 aa6.89□□□□□ -1.31
PABPC1-223ENST00000523636 SPG7Q9UQ90 795 aa6.89□□□□□ -1.31
PABPC1-223ENST00000523636 IRS2Q9Y4H2 1338 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms