RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-222	ENST00000523555	SP3	Q02447	781 aa		11.49	□□□□□ -0.57
PABPC1-222	ENST00000523555	GABPA	Q06546	454 aa		11.49	□□□□□ -0.57
PABPC1-222	ENST00000523555	TATDN1	Q6P1N9	297 aa		11.49	□□□□□ -0.57
PABPC1-222	ENST00000523555	OTOP1	Q7RTM1	612 aa		11.49	□□□□□ -0.57
PABPC1-222	ENST00000523555	CERS3	Q8IU89	383 aa		11.49	□□□□□ -0.57
PABPC1-222	ENST00000523555	DYNLL2	Q96FJ2	89 aa		11.49	□□□□□ -0.57
PABPC1-222	ENST00000523555	GPATCH3	Q96I76	525 aa		11.49	□□□□□ -0.57
PABPC1-222	ENST00000523555	EHD4	Q9H223	541 aa		11.49	□□□□□ -0.57
PABPC1-222	ENST00000523555	CPA4	Q9UI42	421 aa		11.49	□□□□□ -0.57
PABPC1-222	ENST00000523555	SERPINB13	Q9UIV8	391 aa		11.49	□□□□□ -0.57
PABPC1-222	ENST00000523555	ZBTB21	Q9ULJ3	1066 aa		11.49	□□□□□ -0.57
PABPC1-222	ENST00000523555	GREB1L	Q9C091	1923 aa	Predicted RBP	11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	CCDC85C	A6NKD9	419 aa		11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	USP17L5	A8MUK1	530 aa		11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	GLRX3	O76003	335 aa	Known RBP	11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	GH2	P01242	217 aa		11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	POLR3D	P05423	398 aa	Predicted RBP	11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	GUCY1A2	P33402	732 aa		11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	PDE1A	P54750	535 aa		11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	HMGCS2	P54868	508 aa		11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	C17orf99	Q6UX52	265 aa		11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	ZNF280C	Q8ND82	737 aa		11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	STRBP	Q96SI9	672 aa	Known RBP	11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	TRIM34	Q9BYJ4	488 aa		11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	ZCCHC17	Q9NP64	241 aa	Known RBP	11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	TRIM17	Q9Y577	477 aa		11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	SLC4A4	Q9Y6R1	1079 aa		11.48	□□□□□ -0.57
PABPC1-222	ENST00000523555	PARP14	Q460N5	1801 aa		11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	RNF113A	O15541	343 aa	Known RBP	11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	ASNS	P08243	561 aa		11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	MTMR2	Q13614	643 aa		11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	AAMP	Q13685	434 aa		11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	ZSCAN25	Q6NSZ9	544 aa		11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	TTC6	Q86TZ1	520 aa		11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	APPBP2	Q92624	585 aa		11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	RWDD1	Q9H446	243 aa	Predicted RBP	11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	STAP2	Q9UGK3	403 aa		11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	AGTPBP1	Q9UPW5	1226 aa		11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	HPS5	Q9UPZ3	1129 aa		11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	RLF	Q13129	1914 aa		11.47	□□□□□ -0.57
PABPC1-222	ENST00000523555	PLXNB2	O15031	1838 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	GSG1L2	A8MUP6	293 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	USP17L12	C9JPN9	530 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	USP17L21	D6R901	530 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	ERC2	O15083	957 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	GPAA1	O43292	621 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	PEX10	O60683	326 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	BCR	P11274	1271 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	NUCB1	Q02818	461 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	CERKL	Q49MI3	558 aa	Predicted RBP	11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	SH3D19	Q5HYK7	790 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	C12orf60	Q5U649	245 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	CTR9	Q6PD62	1173 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	CCDC129	Q6ZRS4	1044 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	FASTKD5	Q7L8L6	764 aa	Known RBP	11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	CLEC10A	Q8IUN9	316 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	ERO1A	Q96HE7	468 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	FSD1	Q9BTV5	496 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	WDR18	Q9BV38	432 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	ATP8A2	Q9NTI2	1148 aa		11.46	□□□□□ -0.57
PABPC1-222	ENST00000523555	MYH4	Q9Y623	1939 aa		11.46	□□□□□ -0.58
PABPC1-222	ENST00000523555	MKI67	P46013	3256 aa	Known RBP	11.46	□□□□□ -0.58
PABPC1-222	ENST00000523555	FOXP2	O15409	715 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	AKR1B1	P15121	316 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	BACE1	P56817	501 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	LACTB	P83111	547 aa	Predicted RBP	11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	SEPT2	Q15019	361 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	RAB3GAP1	Q15042	981 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	ZYX	Q15942	572 aa	Known RBP	11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	ABCB5	Q2M3G0	1257 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	CHD1L	Q86WJ1	897 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	PLEKHM2	Q8IWE5	1019 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	STK11IP	Q8N1F8	1099 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	ACER1	Q8TDN7	264 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	PARK7	Q99497	189 aa	Known RBP	11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	EFCC1	Q9HA90	598 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	AS3MT	Q9HBK9	375 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	EMILIN3	Q9NT22	766 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555	PTPN22	Q9Y2R2	807 aa		11.45	□□□□□ -0.58
PABPC1-222	ENST00000523555		A0A1W2PRG0	241 aa		11.44	□□□□□ -0.58
PABPC1-222	ENST00000523555	PDE4A	P27815	886 aa		11.44	□□□□□ -0.58
PABPC1-222	ENST00000523555	ZMYM1	Q5SVZ6	1142 aa		11.44	□□□□□ -0.58
PABPC1-222	ENST00000523555	POTEE	Q6S8J3	1075 aa		11.44	□□□□□ -0.58
PABPC1-222	ENST00000523555	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.44	□□□□□ -0.58
PABPC1-222	ENST00000523555	TRIM47	Q96LD4	638 aa		11.44	□□□□□ -0.58
PABPC1-222	ENST00000523555	TBC1D2	Q9BYX2	928 aa		11.44	□□□□□ -0.58
PABPC1-222	ENST00000523555	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.44	□□□□□ -0.58
PABPC1-222	ENST00000523555	SLC45A1	Q9Y2W3	748 aa		11.44	□□□□□ -0.58
PABPC1-222	ENST00000523555	COL11A1	P12107	1806 aa	Predicted RBP	11.44	□□□□□ -0.58
PABPC1-222	ENST00000523555	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.44	□□□□□ -0.58
PABPC1-222	ENST00000523555	TNRC18	O15417	2968 aa	Predicted RBP	11.43	□□□□□ -0.58
PABPC1-222	ENST00000523555	USP17L10	C9JJH3	530 aa		11.43	□□□□□ -0.58
PABPC1-222	ENST00000523555	ZFY	P08048	801 aa	Predicted RBP	11.43	□□□□□ -0.58
PABPC1-222	ENST00000523555	CDK8	P49336	464 aa		11.43	□□□□□ -0.58
PABPC1-222	ENST00000523555	SOX10	P56693	466 aa		11.43	□□□□□ -0.58
PABPC1-222	ENST00000523555	PKN2	Q16513	984 aa	Known RBP	11.43	□□□□□ -0.58
PABPC1-222	ENST00000523555	KIAA1755	Q5JYT7	1200 aa		11.43	□□□□□ -0.58
PABPC1-222	ENST00000523555	C16orf86	Q6ZW13	317 aa		11.43	□□□□□ -0.58

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