RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 UTYO14607 1347 aa17.39■□□□□ 0.37
NKX3-1-202ENST00000523261 CAP2P40123 477 aa17.38■□□□□ 0.37
NKX3-1-202ENST00000523261 GJC2Q5T442 439 aaPredicted RBP17.38■□□□□ 0.37
NKX3-1-202ENST00000523261 POTEEQ6S8J3 1075 aa17.38■□□□□ 0.37
NKX3-1-202ENST00000523261 CCAR1Q8IX12 1150 aaKnown RBP17.38■□□□□ 0.37
NKX3-1-202ENST00000523261 ITGB8P26012 769 aa17.37■□□□□ 0.37
NKX3-1-202ENST00000523261 CNGA1P29973 690 aa17.37■□□□□ 0.37
NKX3-1-202ENST00000523261 MTMR2Q13614 643 aa17.37■□□□□ 0.37
NKX3-1-202ENST00000523261 AKNAD1Q5T1N1 836 aa17.37■□□□□ 0.37
NKX3-1-202ENST00000523261 EDC3Q96F86 508 aaKnown RBP17.37■□□□□ 0.37
NKX3-1-202ENST00000523261 SRCIN1Q9C0H9 1055 aa17.37■□□□□ 0.37
NKX3-1-202ENST00000523261 AS3MTQ9HBK9 375 aa17.37■□□□□ 0.37
NKX3-1-202ENST00000523261 MYO9BQ13459 2157 aa17.36■□□□□ 0.37
NKX3-1-202ENST00000523261 BACE1P56817 501 aa17.36■□□□□ 0.37
NKX3-1-202ENST00000523261 ARRDC4Q8NCT1 418 aa17.36■□□□□ 0.37
NKX3-1-202ENST00000523261 TRPV1Q8NER1 839 aa17.36■□□□□ 0.37
NKX3-1-202ENST00000523261 FAM163AQ96GL9 167 aaPredicted RBP17.36■□□□□ 0.37
NKX3-1-202ENST00000523261 PAGR1Q9BTK6 254 aa17.36■□□□□ 0.37
NKX3-1-202ENST00000523261 WDR18Q9BV38 432 aa17.36■□□□□ 0.37
NKX3-1-202ENST00000523261 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.35■□□□□ 0.37
NKX3-1-202ENST00000523261 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.35■□□□□ 0.37
NKX3-1-202ENST00000523261 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
NKX3-1-202ENST00000523261 BTDP43251 543 aa17.35■□□□□ 0.37
NKX3-1-202ENST00000523261 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
NKX3-1-202ENST00000523261 WWC1Q8IX03 1113 aa17.35■□□□□ 0.37
NKX3-1-202ENST00000523261 GAS2L1Q99501 681 aaPredicted RBP17.35■□□□□ 0.37
NKX3-1-202ENST00000523261 TMOD4Q9NZQ9 345 aa17.35■□□□□ 0.37
NKX3-1-202ENST00000523261 KBTBD13C9JR72 458 aa17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 CYP2C19P33261 490 aa17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 RHBDL3P58872 404 aa17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 IL16Q14005 1332 aa17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 CCDC27Q2M243 656 aa17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 C1orf53Q5VUE5 145 aa17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 GTF3C2Q8WUA4 911 aaPredicted RBP17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 TIFAQ96CG3 184 aa17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 NECAB3Q96P71 396 aaPredicted RBP17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 FANCIQ9NVI1 1328 aa17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 GNL3LQ9NVN8 582 aaKnown RBP17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 DENND2AQ9ULE3 1009 aa17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 HCN4Q9Y3Q4 1203 aa17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 CHD9Q3L8U1 2897 aa17.34■□□□□ 0.37
NKX3-1-202ENST00000523261 IGHA2P01877 340 aa17.33■□□□□ 0.36
NKX3-1-202ENST00000523261 HOXC6P09630 235 aa17.33■□□□□ 0.36
NKX3-1-202ENST00000523261 CYBAP13498 195 aa17.33■□□□□ 0.36
NKX3-1-202ENST00000523261 TLE2Q04725 743 aa17.33■□□□□ 0.36
NKX3-1-202ENST00000523261 DZIP1Q86YF9 867 aaKnown RBP17.33■□□□□ 0.36
NKX3-1-202ENST00000523261 IL27Q8NEV9 243 aa17.33■□□□□ 0.36
NKX3-1-202ENST00000523261 LRFN3Q9BTN0 628 aa17.33■□□□□ 0.36
NKX3-1-202ENST00000523261 CWC22Q9HCG8 908 aaKnown RBP17.33■□□□□ 0.36
NKX3-1-202ENST00000523261 NDUFB9Q9Y6M9 179 aa17.33■□□□□ 0.36
NKX3-1-202ENST00000523261 MUC6Q6W4X9 2439 aa17.33■□□□□ 0.36
NKX3-1-202ENST00000523261 MROH7-TTC4A0A0A0MT08 1334 aa17.32■□□□□ 0.36
NKX3-1-202ENST00000523261 TCF20Q9UGU0 1960 aaKnown RBP17.32■□□□□ 0.36
NKX3-1-202ENST00000523261 SLC15A5A6NIM6 579 aa17.32■□□□□ 0.36
NKX3-1-202ENST00000523261 EYA2O00167 538 aa17.32■□□□□ 0.36
NKX3-1-202ENST00000523261 SEMA3EO15041 775 aa17.32■□□□□ 0.36
NKX3-1-202ENST00000523261 ATP2B2Q01814 1243 aa17.32■□□□□ 0.36
NKX3-1-202ENST00000523261 SLF2Q8IX21 1173 aa17.32■□□□□ 0.36
NKX3-1-202ENST00000523261 ZGPATQ8N5A5 531 aaKnown RBP17.32■□□□□ 0.36
NKX3-1-202ENST00000523261 NPLOC4Q8TAT6 608 aa17.32■□□□□ 0.36
NKX3-1-202ENST00000523261 PRDM12Q9H4Q4 367 aa17.32■□□□□ 0.36
NKX3-1-202ENST00000523261 TACC3Q9Y6A5 838 aa17.32■□□□□ 0.36
NKX3-1-202ENST00000523261 C19orf81C9J6K1 198 aa17.31■□□□□ 0.36
NKX3-1-202ENST00000523261 CNMDO75829 334 aa17.31■□□□□ 0.36
NKX3-1-202ENST00000523261 GLRX3O76003 335 aaKnown RBP17.31■□□□□ 0.36
NKX3-1-202ENST00000523261 PTPREP23469 700 aa17.31■□□□□ 0.36
NKX3-1-202ENST00000523261 ADCYAP1R1P41586 468 aa17.31■□□□□ 0.36
NKX3-1-202ENST00000523261 PHKA1P46020 1223 aa17.31■□□□□ 0.36
NKX3-1-202ENST00000523261 JAG1P78504 1218 aa17.31■□□□□ 0.36
NKX3-1-202ENST00000523261 CCDC85BQ15834 202 aaPredicted RBP17.31■□□□□ 0.36
NKX3-1-202ENST00000523261 GPR75-ASB3A0A0A6YYF3 556 aa17.3■□□□□ 0.36
NKX3-1-202ENST00000523261 KIAA0355O15063 1070 aa17.3■□□□□ 0.36
NKX3-1-202ENST00000523261 ZBTB22O15209 634 aa17.3■□□□□ 0.36
NKX3-1-202ENST00000523261 FPGSQ05932 587 aa17.3■□□□□ 0.36
NKX3-1-202ENST00000523261 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
NKX3-1-202ENST00000523261 ADGRE1Q14246 886 aa17.3■□□□□ 0.36
NKX3-1-202ENST00000523261 ATP2B3Q16720 1220 aa17.3■□□□□ 0.36
NKX3-1-202ENST00000523261 ANO1Q5XXA6 986 aa17.3■□□□□ 0.36
NKX3-1-202ENST00000523261 ATG9AQ7Z3C6 839 aa17.3■□□□□ 0.36
NKX3-1-202ENST00000523261 FERMT2Q96AC1 680 aa17.3■□□□□ 0.36
NKX3-1-202ENST00000523261 HERC5Q9UII4 1024 aaKnown RBP17.3■□□□□ 0.36
NKX3-1-202ENST00000523261 RABGAP1Q9Y3P9 1069 aa17.3■□□□□ 0.36
NKX3-1-202ENST00000523261 USP17L10C9JJH3 530 aa17.29■□□□□ 0.36
NKX3-1-202ENST00000523261 ASNSP08243 561 aa17.29■□□□□ 0.36
NKX3-1-202ENST00000523261 CLTBP09497 229 aa17.29■□□□□ 0.36
NKX3-1-202ENST00000523261 BMP1P13497 986 aa17.29■□□□□ 0.36
NKX3-1-202ENST00000523261 RFX5P48382 616 aaPredicted RBP17.29■□□□□ 0.36
NKX3-1-202ENST00000523261 CCNA1P78396 465 aa17.29■□□□□ 0.36
NKX3-1-202ENST00000523261 GRB14Q14449 540 aa17.29■□□□□ 0.36
NKX3-1-202ENST00000523261 ABCF2Q9UG63 623 aa17.29■□□□□ 0.36
NKX3-1-202ENST00000523261 SIPA1L1O43166 1804 aa17.28■□□□□ 0.36
NKX3-1-202ENST00000523261 RAG1P15918 1043 aa17.28■□□□□ 0.36
NKX3-1-202ENST00000523261 PBX2P40425 430 aa17.28■□□□□ 0.36
NKX3-1-202ENST00000523261 LRRC41Q15345 812 aa17.28■□□□□ 0.36
NKX3-1-202ENST00000523261 WDR78Q5VTH9 848 aa17.28■□□□□ 0.36
NKX3-1-202ENST00000523261 ZNF384Q8TF68 577 aa17.28■□□□□ 0.36
NKX3-1-202ENST00000523261 PBX4Q9BYU1 374 aa17.28■□□□□ 0.36
NKX3-1-202ENST00000523261 EPHX3Q9H6B9 360 aa17.28■□□□□ 0.36
NKX3-1-202ENST00000523261 CXXC1Q9P0U4 656 aaPredicted RBP17.28■□□□□ 0.36
NKX3-1-202ENST00000523261 PLXNA1Q9UIW2 1896 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms