RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 SERPINB13Q9UIV8 391 aa13.2□□□□□ -0.3
PVT1-216ENST00000523068 OSBPP22059 807 aa13.19□□□□□ -0.3
PVT1-216ENST00000523068 HMGCS2P54868 508 aa13.19□□□□□ -0.3
PVT1-216ENST00000523068 RAET1EQ8TD07 263 aa13.19□□□□□ -0.3
PVT1-216ENST00000523068 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.19□□□□□ -0.3
PVT1-216ENST00000523068 BOLA2Q9H3K6 86 aa13.19□□□□□ -0.3
PVT1-216ENST00000523068 TMOD4Q9NZQ9 345 aa13.19□□□□□ -0.3
PVT1-216ENST00000523068 MYPNQ86TC9 1320 aa13.18□□□□□ -0.3
PVT1-216ENST00000523068 ZNF532Q9HCE3 1301 aa13.18□□□□□ -0.3
PVT1-216ENST00000523068 C19orf81C9J6K1 198 aa13.18□□□□□ -0.3
PVT1-216ENST00000523068 USP17L10C9JJH3 530 aa13.18□□□□□ -0.3
PVT1-216ENST00000523068 ECM2O94769 699 aaPredicted RBP13.18□□□□□ -0.3
PVT1-216ENST00000523068 GDF11O95390 407 aa13.18□□□□□ -0.3
PVT1-216ENST00000523068 POLR3DP05423 398 aaPredicted RBP13.18□□□□□ -0.3
PVT1-216ENST00000523068 CTGFP29279 349 aa13.18□□□□□ -0.3
PVT1-216ENST00000523068 GCLCP48506 637 aaPredicted RBP13.18□□□□□ -0.3
PVT1-216ENST00000523068 BACE1P56817 501 aa13.18□□□□□ -0.3
PVT1-216ENST00000523068 SLC4A8Q2Y0W8 1093 aa13.18□□□□□ -0.3
PVT1-216ENST00000523068 TREML2Q5T2D2 321 aa13.18□□□□□ -0.3
PVT1-216ENST00000523068 TATDN1Q6P1N9 297 aa13.18□□□□□ -0.3
PVT1-216ENST00000523068 HAUS7Q99871 368 aa13.18□□□□□ -0.3
PVT1-216ENST00000523068 ZBTB21Q9ULJ3 1066 aa13.18□□□□□ -0.3
PVT1-216ENST00000523068 BAZ2AQ9UIF9 1905 aaKnown RBP13.17□□□□□ -0.3
PVT1-216ENST00000523068 TCRBV5S4A2TA0A5A2 114 aa13.17□□□□□ -0.3
PVT1-216ENST00000523068 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
PVT1-216ENST00000523068 MTMR2Q13614 643 aa13.17□□□□□ -0.3
PVT1-216ENST00000523068 FAM110CQ1W6H9 321 aa13.17□□□□□ -0.3
PVT1-216ENST00000523068 CERKLQ49MI3 558 aaPredicted RBP13.17□□□□□ -0.3
PVT1-216ENST00000523068 GPATCH3Q96I76 525 aa13.17□□□□□ -0.3
PVT1-216ENST00000523068 DCTPP1Q9H773 170 aa13.17□□□□□ -0.3
PVT1-216ENST00000523068 ADD2P35612 726 aa13.16□□□□□ -0.3
PVT1-216ENST00000523068 ZSCAN25Q6NSZ9 544 aa13.16□□□□□ -0.3
PVT1-216ENST00000523068 ANKRD13CQ8N6S4 541 aa13.16□□□□□ -0.3
PVT1-216ENST00000523068 SH3TC2Q8TF17 1288 aa13.16□□□□□ -0.3
PVT1-216ENST00000523068 EDC3Q96F86 508 aaKnown RBP13.16□□□□□ -0.3
PVT1-216ENST00000523068 ASCC2Q9H1I8 757 aaPredicted RBP13.16□□□□□ -0.3
PVT1-216ENST00000523068 CABP5Q9NP86 173 aa13.16□□□□□ -0.3
PVT1-216ENST00000523068 ECHDC1Q9NTX5 307 aa13.16□□□□□ -0.3
PVT1-216ENST00000523068 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
PVT1-216ENST00000523068 DOCK3Q8IZD9 2030 aa13.15□□□□□ -0.3
PVT1-216ENST00000523068 TNPO2O14787 897 aaKnown RBP13.15□□□□□ -0.3
PVT1-216ENST00000523068 SMARCA5O60264 1052 aaPredicted RBP13.15□□□□□ -0.3
PVT1-216ENST00000523068 GH2P01242 217 aa13.15□□□□□ -0.3
PVT1-216ENST00000523068 NEFLP07196 543 aa13.15□□□□□ -0.3
PVT1-216ENST00000523068 HOXA7P31268 230 aaPredicted RBP13.15□□□□□ -0.3
PVT1-216ENST00000523068 GRK4P32298 578 aa13.15□□□□□ -0.3
PVT1-216ENST00000523068 PLCD1P51178 756 aa13.15□□□□□ -0.3
PVT1-216ENST00000523068 RRP1P56182 461 aaKnown RBP13.15□□□□□ -0.3
PVT1-216ENST00000523068 IRX3P78415 501 aaPredicted RBP13.15□□□□□ -0.3
PVT1-216ENST00000523068 JAG1P78504 1218 aa13.15□□□□□ -0.3
PVT1-216ENST00000523068 PRKCZQ05513 592 aa13.15□□□□□ -0.3
PVT1-216ENST00000523068 ABCB5Q2M3G0 1257 aa13.15□□□□□ -0.3
PVT1-216ENST00000523068 LCORLQ8N3X6 602 aa13.15□□□□□ -0.3
PVT1-216ENST00000523068 SLAIN1Q8ND83 568 aa13.15□□□□□ -0.3
PVT1-216ENST00000523068 COA7Q96BR5 231 aa13.15□□□□□ -0.3
PVT1-216ENST00000523068 DCP1AQ9NPI6 582 aaPredicted RBP13.15□□□□□ -0.3
PVT1-216ENST00000523068 ATP8A2Q9NTI2 1148 aa13.15□□□□□ -0.3
PVT1-216ENST00000523068 MCM9Q9NXL9 1143 aa13.15□□□□□ -0.3
PVT1-216ENST00000523068 KIAA0100Q14667 2235 aaKnown RBP13.15□□□□□ -0.31
PVT1-216ENST00000523068 PDE4DIPQ5VU43 2346 aa13.14□□□□□ -0.31
PVT1-216ENST00000523068 BRCA2P51587 3418 aa13.14□□□□□ -0.31
PVT1-216ENST00000523068 EN2P19622 333 aaPredicted RBP13.14□□□□□ -0.31
PVT1-216ENST00000523068 USP14P54578 494 aa13.14□□□□□ -0.31
PVT1-216ENST00000523068 UBXN2AP68543 259 aa13.14□□□□□ -0.31
PVT1-216ENST00000523068 RAB3GAP1Q15042 981 aa13.14□□□□□ -0.31
PVT1-216ENST00000523068 UBE3CQ15386 1083 aa13.14□□□□□ -0.31
PVT1-216ENST00000523068 USP17L2Q6R6M4 530 aa13.14□□□□□ -0.31
PVT1-216ENST00000523068 AMOTL1Q8IY63 956 aa13.14□□□□□ -0.31
PVT1-216ENST00000523068 GTF3C2Q8WUA4 911 aaPredicted RBP13.14□□□□□ -0.31
PVT1-216ENST00000523068 SDR42E1Q8WUS8 393 aa13.14□□□□□ -0.31
PVT1-216ENST00000523068 DDRGK1Q96HY6 314 aa13.14□□□□□ -0.31
PVT1-216ENST00000523068 BIN2Q9UBW5 565 aaPredicted RBP13.14□□□□□ -0.31
PVT1-216ENST00000523068 MBD4O95243 580 aa13.13□□□□□ -0.31
PVT1-216ENST00000523068 MYCP01106 439 aaPredicted RBP13.13□□□□□ -0.31
PVT1-216ENST00000523068 SHMT1P34896 483 aa13.13□□□□□ -0.31
PVT1-216ENST00000523068 GABPAQ06546 454 aa13.13□□□□□ -0.31
PVT1-216ENST00000523068 IRF5Q13568 498 aa13.13□□□□□ -0.31
PVT1-216ENST00000523068 SHROOM1Q2M3G4 852 aaPredicted RBP13.13□□□□□ -0.31
PVT1-216ENST00000523068 FEZ1Q99689 392 aa13.13□□□□□ -0.31
PVT1-216ENST00000523068 ARMT1Q9H993 441 aa13.13□□□□□ -0.31
PVT1-216ENST00000523068 SWAP70Q9UH65 585 aa13.13□□□□□ -0.31
PVT1-216ENST00000523068 GABRQQ9UN88 632 aa13.13□□□□□ -0.31
PVT1-216ENST00000523068 ADCY3O60266 1144 aa13.12□□□□□ -0.31
PVT1-216ENST00000523068 FLT3LGP49771 235 aa13.12□□□□□ -0.31
PVT1-216ENST00000523068 HERVK_113P62684 666 aa13.12□□□□□ -0.31
PVT1-216ENST00000523068 PRPF38BQ5VTL8 546 aaKnown RBP13.12□□□□□ -0.31
PVT1-216ENST00000523068 POTEDQ86YR6 584 aa13.12□□□□□ -0.31
PVT1-216ENST00000523068 NKX2-3Q8TAU0 364 aa13.12□□□□□ -0.31
PVT1-216ENST00000523068 PXYLP1Q8TE99 480 aa13.12□□□□□ -0.31
PVT1-216ENST00000523068 C12orf42Q96LP6 360 aa13.12□□□□□ -0.31
PVT1-216ENST00000523068 P2RX7Q99572 595 aaKnown RBP13.12□□□□□ -0.31
PVT1-216ENST00000523068 MORF4L1Q9UBU8 362 aa13.12□□□□□ -0.31
PVT1-216ENST00000523068 MPHOSPH10O00566 681 aaKnown RBP13.11□□□□□ -0.31
PVT1-216ENST00000523068 LRRFIP1Q32MZ4 808 aaKnown RBP13.11□□□□□ -0.31
PVT1-216ENST00000523068 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
PVT1-216ENST00000523068 GPRC5AQ8NFJ5 357 aa13.11□□□□□ -0.31
PVT1-216ENST00000523068 KIAA1683Q9H0B3 1180 aa13.11□□□□□ -0.31
PVT1-216ENST00000523068 EMILIN3Q9NT22 766 aa13.11□□□□□ -0.31
PVT1-216ENST00000523068 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
PVT1-216ENST00000523068 PCDHB15Q9Y5E8 787 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms