RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 ADCK5Q3MIX3 580 aa8.16□□□□□ -1.1
CSMD1-211ENST00000523062 NOL8Q76FK4 1167 aaKnown RBP8.16□□□□□ -1.1
CSMD1-211ENST00000523062 RUFY3Q7L099 469 aa8.16□□□□□ -1.1
CSMD1-211ENST00000523062 PODNQ7Z5L7 613 aa8.16□□□□□ -1.1
CSMD1-211ENST00000523062 AMIGO3Q86WK7 504 aa8.16□□□□□ -1.1
CSMD1-211ENST00000523062 ZSCAN31Q96LW9 406 aaPredicted RBP8.16□□□□□ -1.1
CSMD1-211ENST00000523062 SEC62Q99442 399 aaKnown RBP8.16□□□□□ -1.1
CSMD1-211ENST00000523062 SH2B1Q9NRF2 756 aaPredicted RBP8.16□□□□□ -1.1
CSMD1-211ENST00000523062 CNTNAP5Q8WYK1 1306 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 M0R2C6 588 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 SPINT1O43278 529 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 CHGBP05060 677 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 RPS6KB1P23443 525 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 ADD2P35612 726 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 RASGRF1Q13972 1273 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 UBE4AQ14139 1066 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 NFIXQ14938 502 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 UBE3CQ15386 1083 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 PI16Q6UXB8 463 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 ZGPATQ8N5A5 531 aaKnown RBP8.15□□□□□ -1.1
CSMD1-211ENST00000523062 CNBD1Q8NA66 436 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 SPATA5Q8NB90 893 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 TNPO1Q92973 898 aaKnown RBP8.15□□□□□ -1.1
CSMD1-211ENST00000523062 OSBP2Q969R2 916 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 C1QTNF2Q9BXJ5 285 aa8.15□□□□□ -1.1
CSMD1-211ENST00000523062 ALDH8A1Q9H2A2 487 aaPredicted RBP8.15□□□□□ -1.1
CSMD1-211ENST00000523062 PIH1D3Q9NQM4 214 aaKnown RBP8.15□□□□□ -1.1
CSMD1-211ENST00000523062 GNL3LQ9NVN8 582 aaKnown RBP8.15□□□□□ -1.1
CSMD1-211ENST00000523062 AKAP11Q9UKA4 1901 aa8.15□□□□□ -1.11
CSMD1-211ENST00000523062 UBR3Q6ZT12 1888 aa8.15□□□□□ -1.11
CSMD1-211ENST00000523062 ZNF804BA4D1E1 1349 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 MYH7P12883 1935 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 GOLGA6L22H0YM25 854 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 CYP2E1P05181 493 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-211ENST00000523062 HMGB1P09429 215 aaKnown RBP8.14□□□□□ -1.11
CSMD1-211ENST00000523062 HSPD1P10809 573 aaKnown RBP8.14□□□□□ -1.11
CSMD1-211ENST00000523062 CPA1P15085 419 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 PDE6AP16499 860 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 FSHRP23945 695 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 SSTR3P32745 418 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-211ENST00000523062 RPS8P62241 208 aaKnown RBP8.14□□□□□ -1.11
CSMD1-211ENST00000523062 CLEC17AQ6ZS10 378 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 NEK1Q96PY6 1258 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 ANKRD2Q9GZV1 360 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 CTNNA3Q9UI47 895 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 MINPP1Q9UNW1 487 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 MAP4K5Q9Y4K4 846 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-211ENST00000523062 A0A1B0GUL6 1792 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 COL4A1P02462 1669 aa8.14□□□□□ -1.11
CSMD1-211ENST00000523062 CASZ1Q86V15 1759 aa8.13□□□□□ -1.11
CSMD1-211ENST00000523062 GPAA1O43292 621 aa8.13□□□□□ -1.11
CSMD1-211ENST00000523062 IDH1O75874 414 aaKnown RBP8.13□□□□□ -1.11
CSMD1-211ENST00000523062 CYP21A2P08686 494 aa8.13□□□□□ -1.11
CSMD1-211ENST00000523062 GYS1P13807 737 aa8.13□□□□□ -1.11
CSMD1-211ENST00000523062 ST5P78524 1137 aa8.13□□□□□ -1.11
CSMD1-211ENST00000523062 MAP3K12Q12852 859 aa8.13□□□□□ -1.11
CSMD1-211ENST00000523062 TXNRD1Q16881 649 aa8.13□□□□□ -1.11
CSMD1-211ENST00000523062 SLFNL1Q499Z3 407 aa8.13□□□□□ -1.11
CSMD1-211ENST00000523062 CAVIN4Q5BKX8 364 aa8.13□□□□□ -1.11
CSMD1-211ENST00000523062 SLC9C2Q5TAH2 1124 aa8.13□□□□□ -1.11
CSMD1-211ENST00000523062 KRTAP1-3Q8IUG1 177 aa8.13□□□□□ -1.11
CSMD1-211ENST00000523062 CCDC116Q8IYX3 515 aa8.13□□□□□ -1.11
CSMD1-211ENST00000523062 CELF1Q92879 486 aaKnown RBP8.13□□□□□ -1.11
CSMD1-211ENST00000523062 TAF6LQ9Y6J9 622 aa8.13□□□□□ -1.11
CSMD1-211ENST00000523062 TNRC6CQ9HCJ0 1690 aaKnown RBP8.13□□□□□ -1.11
CSMD1-211ENST00000523062 ZNF532Q9HCE3 1301 aa8.12□□□□□ -1.11
CSMD1-211ENST00000523062 CFAP99D6REC4 459 aa8.12□□□□□ -1.11
CSMD1-211ENST00000523062 SNAP23O00161 211 aa8.12□□□□□ -1.11
CSMD1-211ENST00000523062 RXRBP28702 533 aa8.12□□□□□ -1.11
CSMD1-211ENST00000523062 GRAPQ13588 217 aa8.12□□□□□ -1.11
CSMD1-211ENST00000523062 IMMTQ16891 758 aaKnown RBP8.12□□□□□ -1.11
CSMD1-211ENST00000523062 PRR5LQ6MZQ0 368 aa8.12□□□□□ -1.11
CSMD1-211ENST00000523062 Q6ZVU0 165 aa8.12□□□□□ -1.11
CSMD1-211ENST00000523062 SH3RF1Q7Z6J0 888 aa8.12□□□□□ -1.11
CSMD1-211ENST00000523062 KRI1Q8N9T8 703 aaKnown RBP8.12□□□□□ -1.11
CSMD1-211ENST00000523062 GRAPLQ8TC17 118 aaPredicted RBP8.12□□□□□ -1.11
CSMD1-211ENST00000523062 PUS7LQ9H0K6 701 aaKnown RBP8.12□□□□□ -1.11
CSMD1-211ENST00000523062 WWC3Q9ULE0 1092 aa8.12□□□□□ -1.11
CSMD1-211ENST00000523062 SMC3Q9UQE7 1217 aa8.12□□□□□ -1.11
CSMD1-211ENST00000523062 DOCK2Q92608 1830 aa8.12□□□□□ -1.11
CSMD1-211ENST00000523062 ZMYM6O95789 1325 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 PDS5AQ29RF7 1337 aaKnown RBP8.11□□□□□ -1.11
CSMD1-211ENST00000523062 WDR33Q9C0J8 1336 aaKnown RBP8.11□□□□□ -1.11
CSMD1-211ENST00000523062 TCRBV5S4A2TA0A5A2 114 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 PLSCR1O15162 318 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 FOXP2O15409 715 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 BAG4O95429 457 aaKnown RBP8.11□□□□□ -1.11
CSMD1-211ENST00000523062 LARGE1O95461 756 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 BRD1O95696 1058 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 SERPINB2P05120 415 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 TM4SF1P30408 202 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 GYG1P46976 350 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 TOB2Q14106 344 aaPredicted RBP8.11□□□□□ -1.11
CSMD1-211ENST00000523062 STOX1Q6ZVD7 989 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 DHX32Q7L7V1 743 aaKnown RBP8.11□□□□□ -1.11
CSMD1-211ENST00000523062 VASH1Q7L8A9 365 aaPredicted RBP8.11□□□□□ -1.11
CSMD1-211ENST00000523062 VPS37DQ86XT2 251 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 CCDC83Q8IWF9 413 aa8.11□□□□□ -1.11
CSMD1-211ENST00000523062 FLAD1Q8NFF5 587 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms