RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 PPP4CP60510 307 aa18.86■□□□□ 0.61
MRPS28-209ENST00000522987 IRX3P78415 501 aaPredicted RBP18.86■□□□□ 0.61
MRPS28-209ENST00000522987 PABPC4Q13310 644 aaKnown RBP eCLIP18.86■□□□□ 0.61
MRPS28-209ENST00000522987 IRF5Q13568 498 aa18.86■□□□□ 0.61
MRPS28-209ENST00000522987 ZYXQ15942 572 aaKnown RBP18.86■□□□□ 0.61
MRPS28-209ENST00000522987 MAGEB6Q8N7X4 407 aa18.86■□□□□ 0.61
MRPS28-209ENST00000522987 HTATIP2Q9BUP3 242 aa18.86■□□□□ 0.61
MRPS28-209ENST00000522987 DHX36Q9H2U1 1008 aaKnown RBP18.86■□□□□ 0.61
MRPS28-209ENST00000522987 ANTXR1Q9H6X2 564 aa18.86■□□□□ 0.61
MRPS28-209ENST00000522987 TMOD4Q9NZQ9 345 aa18.86■□□□□ 0.61
MRPS28-209ENST00000522987 MYH8P13535 1937 aa18.86■□□□□ 0.61
MRPS28-209ENST00000522987 APBB1O00213 710 aa18.85■□□□□ 0.61
MRPS28-209ENST00000522987 GCLCP48506 637 aaPredicted RBP18.85■□□□□ 0.61
MRPS28-209ENST00000522987 SH3D19Q5HYK7 790 aa18.85■□□□□ 0.61
MRPS28-209ENST00000522987 PXYLP1Q8TE99 480 aa18.85■□□□□ 0.61
MRPS28-209ENST00000522987 P2RX7Q99572 595 aaKnown RBP18.85■□□□□ 0.61
MRPS28-209ENST00000522987 ZBTB21Q9ULJ3 1066 aa18.85■□□□□ 0.61
MRPS28-209ENST00000522987 NOP58Q9Y2X3 529 aaKnown RBP18.85■□□□□ 0.61
MRPS28-209ENST00000522987 DDX60LQ5H9U9 1706 aaKnown RBP18.85■□□□□ 0.61
MRPS28-209ENST00000522987 HLA-DOAP06340 250 aa18.84■□□□□ 0.61
MRPS28-209ENST00000522987 ASNSP08243 561 aa18.84■□□□□ 0.61
MRPS28-209ENST00000522987 USP5P45974 858 aa18.84■□□□□ 0.61
MRPS28-209ENST00000522987 BACE1P56817 501 aa18.84■□□□□ 0.61
MRPS28-209ENST00000522987 CEP85Q6P2H3 762 aa18.84■□□□□ 0.61
MRPS28-209ENST00000522987 AACSQ86V21 672 aa18.84■□□□□ 0.61
MRPS28-209ENST00000522987 DIS3LQ8TF46 1054 aaKnown RBP18.84■□□□□ 0.61
MRPS28-209ENST00000522987 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.84■□□□□ 0.61
MRPS28-209ENST00000522987 TXNRD2Q9NNW7 524 aa18.84■□□□□ 0.61
MRPS28-209ENST00000522987 IL1RAPL2Q9NP60 686 aa18.84■□□□□ 0.61
MRPS28-209ENST00000522987 RBM27Q9P2N5 1060 aaKnown RBP18.84■□□□□ 0.61
MRPS28-209ENST00000522987 CYP2B6P20813 491 aa18.83■□□□□ 0.6
MRPS28-209ENST00000522987 FOXP4Q8IVH2 680 aaPredicted RBP18.83■□□□□ 0.6
MRPS28-209ENST00000522987 PAWRQ96IZ0 340 aaKnown RBP18.83■□□□□ 0.6
MRPS28-209ENST00000522987 PAGR1Q9BTK6 254 aa18.83■□□□□ 0.6
MRPS28-209ENST00000522987 WDR18Q9BV38 432 aa18.83■□□□□ 0.6
MRPS28-209ENST00000522987 TBC1D2Q9BYX2 928 aa18.83■□□□□ 0.6
MRPS28-209ENST00000522987 BAZ2AQ9UIF9 1905 aaKnown RBP18.82■□□□□ 0.6
MRPS28-209ENST00000522987 USP17L10C9JJH3 530 aa18.82■□□□□ 0.6
MRPS28-209ENST00000522987 GH2P01242 217 aa18.82■□□□□ 0.6
MRPS28-209ENST00000522987 HERVK_113P62684 666 aa18.82■□□□□ 0.6
MRPS28-209ENST00000522987 ZNF512BQ96KM6 892 aaPredicted RBP18.82■□□□□ 0.6
MRPS28-209ENST00000522987 PAK6Q9NQU5 681 aaPredicted RBP18.82■□□□□ 0.6
MRPS28-209ENST00000522987 GJD2Q9UKL4 321 aa18.82■□□□□ 0.6
MRPS28-209ENST00000522987 HMGCRP04035 888 aa18.81■□□□□ 0.6
MRPS28-209ENST00000522987 FRMPD3Q5JV73 1810 aa18.81■□□□□ 0.6
MRPS28-209ENST00000522987 EVI5O60447 810 aa18.8■□□□□ 0.6
MRPS28-209ENST00000522987 Q3C1V9 767 aa18.8■□□□□ 0.6
MRPS28-209ENST00000522987 METTL16Q86W50 562 aaKnown RBP18.8■□□□□ 0.6
MRPS28-209ENST00000522987 TRIB2Q92519 343 aa18.8■□□□□ 0.6
MRPS28-209ENST00000522987 FEZ1Q99689 392 aa18.8■□□□□ 0.6
MRPS28-209ENST00000522987 EMILIN3Q9NT22 766 aa18.8■□□□□ 0.6
MRPS28-209ENST00000522987 MORF4L1Q9UBU8 362 aa18.8■□□□□ 0.6
MRPS28-209ENST00000522987 NR2E3Q9Y5X4 410 aa18.8■□□□□ 0.6
MRPS28-209ENST00000522987 MYH7P12883 1935 aa18.79■□□□□ 0.6
MRPS28-209ENST00000522987 C19orf81C9J6K1 198 aa18.79■□□□□ 0.6
MRPS28-209ENST00000522987 EVX2Q03828 476 aa18.79■□□□□ 0.6
MRPS28-209ENST00000522987 RAB3GAP1Q15042 981 aa18.79■□□□□ 0.6
MRPS28-209ENST00000522987 PORCNQ9H237 461 aa18.79■□□□□ 0.6
MRPS28-209ENST00000522987 RBPJLQ9UBG7 517 aa18.79■□□□□ 0.6
MRPS28-209ENST00000522987 HOXA7P31268 230 aaPredicted RBP18.78■□□□□ 0.6
MRPS28-209ENST00000522987 MAP3K12Q12852 859 aa18.78■□□□□ 0.6
MRPS28-209ENST00000522987 DIEXFQ68CQ4 756 aaKnown RBP18.78■□□□□ 0.6
MRPS28-209ENST00000522987 POTEEQ6S8J3 1075 aa18.78■□□□□ 0.6
MRPS28-209ENST00000522987 CCAR1Q8IX12 1150 aaKnown RBP18.78■□□□□ 0.6
MRPS28-209ENST00000522987 GPRC5AQ8NFJ5 357 aa18.78■□□□□ 0.6
MRPS28-209ENST00000522987 CRISPLD2Q9H0B8 497 aa18.78■□□□□ 0.6
MRPS28-209ENST00000522987 HMX1Q9NP08 348 aaPredicted RBP18.78■□□□□ 0.6
MRPS28-209ENST00000522987 CCL14Q16627 93 aa18.77■□□□□ 0.6
MRPS28-209ENST00000522987 WDR78Q5VTH9 848 aa18.77■□□□□ 0.6
MRPS28-209ENST00000522987 USP17L2Q6R6M4 530 aa18.77■□□□□ 0.6
MRPS28-209ENST00000522987 C7orf61Q8IZ16 206 aa18.77■□□□□ 0.6
MRPS28-209ENST00000522987 ACER1Q8TDN7 264 aa18.77■□□□□ 0.6
MRPS28-209ENST00000522987 EDC3Q96F86 508 aaKnown RBP18.77■□□□□ 0.6
MRPS28-209ENST00000522987 DNAJC2Q99543 621 aaKnown RBP18.77■□□□□ 0.6
MRPS28-209ENST00000522987 SERPINB13Q9UIV8 391 aa18.77■□□□□ 0.6
MRPS28-209ENST00000522987 RPTORQ8N122 1335 aa18.76■□□□□ 0.59
MRPS28-209ENST00000522987 PRKAR2AP13861 404 aaKnown RBP18.76■□□□□ 0.59
MRPS28-209ENST00000522987 PLCD1P51178 756 aa18.76■□□□□ 0.59
MRPS28-209ENST00000522987 ERVK-9P63128 1117 aa18.76■□□□□ 0.59
MRPS28-209ENST00000522987 ERVK-24P63145 666 aa18.76■□□□□ 0.59
MRPS28-209ENST00000522987 CERKLQ49MI3 558 aaPredicted RBP18.76■□□□□ 0.59
MRPS28-209ENST00000522987 NECAB2Q7Z6G3 386 aa18.76■□□□□ 0.59
MRPS28-209ENST00000522987 ERC1Q8IUD2 1116 aa18.76■□□□□ 0.59
MRPS28-209ENST00000522987 RHPN1Q8TCX5 695 aa18.76■□□□□ 0.59
MRPS28-209ENST00000522987 NUDT12Q9BQG2 462 aa18.76■□□□□ 0.59
MRPS28-209ENST00000522987 CWC22Q9HCG8 908 aaKnown RBP18.76■□□□□ 0.59
MRPS28-209ENST00000522987 STAP2Q9UGK3 403 aa18.76■□□□□ 0.59
MRPS28-209ENST00000522987 ZMYND8Q9ULU4 1186 aaPredicted RBP18.76■□□□□ 0.59
MRPS28-209ENST00000522987 MAGEB6P1A0A0J9YX57 407 aa18.75■□□□□ 0.59
MRPS28-209ENST00000522987 GOLIM4O00461 696 aa18.75■□□□□ 0.59
MRPS28-209ENST00000522987 POLR3DP05423 398 aaPredicted RBP18.75■□□□□ 0.59
MRPS28-209ENST00000522987 PDE3AQ14432 1141 aa18.75■□□□□ 0.59
MRPS28-209ENST00000522987 ABCB5Q2M3G0 1257 aa18.75■□□□□ 0.59
MRPS28-209ENST00000522987 SLFNL1Q499Z3 407 aa18.75■□□□□ 0.59
MRPS28-209ENST00000522987 COG6Q9Y2V7 657 aa18.75■□□□□ 0.59
MRPS28-209ENST00000522987 CYP2D6P10635 497 aa18.74■□□□□ 0.59
MRPS28-209ENST00000522987 PDE6AP16499 860 aa18.74■□□□□ 0.59
MRPS28-209ENST00000522987 SYN1P17600 705 aa18.74■□□□□ 0.59
MRPS28-209ENST00000522987 SHMT1P34896 483 aa18.74■□□□□ 0.59
MRPS28-209ENST00000522987 SLC9C2Q5TAH2 1124 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms