RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 PPP2R5BQ15173 497 aa15.52■□□□□ 0.07
SYNPO-205ENST00000522122 LETM2Q2VYF4 491 aa15.52■□□□□ 0.07
SYNPO-205ENST00000522122 NAPGQ99747 312 aaPredicted RBP15.52■□□□□ 0.07
SYNPO-205ENST00000522122 CYP21A2P08686 494 aa15.52■□□□□ 0.07
SYNPO-205ENST00000522122 NDUFA8P51970 172 aa15.52■□□□□ 0.07
SYNPO-205ENST00000522122 MYL10Q9BUA6 226 aa15.52■□□□□ 0.07
SYNPO-205ENST00000522122 DNAI2Q9GZS0 605 aa15.52■□□□□ 0.07
SYNPO-205ENST00000522122 SASH1O94885 1247 aa15.51■□□□□ 0.07
SYNPO-205ENST00000522122 HS2ST1Q7LGA3 356 aa15.51■□□□□ 0.07
SYNPO-205ENST00000522122 ZNF622Q969S3 477 aaKnown RBP eCLIP15.51■□□□□ 0.07
SYNPO-205ENST00000522122 ZBTB9Q96C00 473 aa15.51■□□□□ 0.07
SYNPO-205ENST00000522122 PIK3AP1Q6ZUJ8 805 aa15.51■□□□□ 0.07
SYNPO-205ENST00000522122 SV2BQ7L1I2 683 aa15.51■□□□□ 0.07
SYNPO-205ENST00000522122 LPIN2Q92539 896 aa15.51■□□□□ 0.07
SYNPO-205ENST00000522122 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.51■□□□□ 0.07
SYNPO-205ENST00000522122 RASAL2Q9UJF2 1139 aa15.51■□□□□ 0.07
SYNPO-205ENST00000522122 MAP2P11137 1827 aaKnown RBP15.51■□□□□ 0.07
SYNPO-205ENST00000522122 SPDYE3A6NKU9 549 aa15.51■□□□□ 0.07
SYNPO-205ENST00000522122 PARP10Q53GL7 1025 aa15.51■□□□□ 0.07
SYNPO-205ENST00000522122 ARFGAP2Q8N6H7 521 aa15.51■□□□□ 0.07
SYNPO-205ENST00000522122 NOC4LQ9BVI4 516 aaKnown RBP15.51■□□□□ 0.07
SYNPO-205ENST00000522122 GPR108Q9NPR9 543 aa15.51■□□□□ 0.07
SYNPO-205ENST00000522122 CHMP4BP1P59074 171 aa15.51■□□□□ 0.07
SYNPO-205ENST00000522122 PRDM1O75626 825 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 POSTNQ15063 836 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 TTC38Q5R3I4 469 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 CYP26C1Q6V0L0 522 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 SYNRGQ9UMZ2 1314 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 MAPK8IP1Q9UQF2 711 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 WDHD1O75717 1129 aaPredicted RBP15.5■□□□□ 0.07
SYNPO-205ENST00000522122 PDE4DQ08499 809 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 ZMYM1Q5SVZ6 1142 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 TSGA10Q9BZW7 698 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 ATP2C2O75185 946 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 NCBP1Q09161 790 aaKnown RBP15.5■□□□□ 0.07
SYNPO-205ENST00000522122 ZMYM6O95789 1325 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 PARP1P09874 1014 aaKnown RBP15.5■□□□□ 0.07
SYNPO-205ENST00000522122 PNOCQ13519 176 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 FCHSD1Q86WN1 690 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 TMTC1Q8IUR5 882 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 IFT81Q8WYA0 676 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 ZC3H12CQ9C0D7 883 aaKnown RBP15.5■□□□□ 0.07
SYNPO-205ENST00000522122 KCNF1Q9H3M0 494 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 POLR3EQ9NVU0 708 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 CLIC4Q9Y696 253 aa15.5■□□□□ 0.07
SYNPO-205ENST00000522122 TRAF5O00463 557 aa15.49■□□□□ 0.07
SYNPO-205ENST00000522122 JAG2Q9Y219 1238 aa15.49■□□□□ 0.07
SYNPO-205ENST00000522122 ZNF532Q9HCE3 1301 aa15.49■□□□□ 0.07
SYNPO-205ENST00000522122 KRT9P35527 623 aa15.49■□□□□ 0.07
SYNPO-205ENST00000522122 BICD1Q96G01 975 aa15.49■□□□□ 0.07
SYNPO-205ENST00000522122 PAK1Q13153 545 aa15.49■□□□□ 0.07
SYNPO-205ENST00000522122 CSGALNACT2Q8N6G5 542 aa15.49■□□□□ 0.07
SYNPO-205ENST00000522122 DDX12PQ92771 950 aa15.49■□□□□ 0.07
SYNPO-205ENST00000522122 TNNC1P63316 161 aa15.49■□□□□ 0.07
SYNPO-205ENST00000522122 PTPRUQ92729 1446 aa15.49■□□□□ 0.07
SYNPO-205ENST00000522122 EFCAB8A8MWE9 144 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 ACTN2P35609 894 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 CFAP58Q5T655 872 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 GPR161Q8N6U8 529 aaKnown RBP15.48■□□□□ 0.07
SYNPO-205ENST00000522122 PHLPP2Q6ZVD8 1323 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 IKBKBO14920 756 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 ERCC6LQ2NKX8 1250 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 KCNJ14Q9UNX9 436 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 FAM13AO94988 1023 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 ETF1P62495 437 aaKnown RBP15.48■□□□□ 0.07
SYNPO-205ENST00000522122 CTDSPL2Q05D32 466 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 WDR78Q5VTH9 848 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 CCDC65Q8IXS2 484 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 FAM76AQ8TAV0 307 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 PGBD1Q96JS3 809 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 ZEB2O60315 1214 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 DNAJC21Q5F1R6 531 aaKnown RBP15.48■□□□□ 0.07
SYNPO-205ENST00000522122 IPO4Q8TEX9 1081 aaKnown RBP15.48■□□□□ 0.07
SYNPO-205ENST00000522122 FERMT2Q96AC1 680 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 CCDC77Q9BR77 488 aa15.48■□□□□ 0.07
SYNPO-205ENST00000522122 RTCBQ9Y3I0 505 aaKnown RBP15.48■□□□□ 0.07
SYNPO-205ENST00000522122 MRPL12P52815 198 aaKnown RBP15.47■□□□□ 0.07
SYNPO-205ENST00000522122 TICAM2Q86XR7 235 aa15.47■□□□□ 0.07
SYNPO-205ENST00000522122 SALL3Q9BXA9 1300 aa15.47■□□□□ 0.07
SYNPO-205ENST00000522122 PHKG2P15735 406 aa15.47■□□□□ 0.07
SYNPO-205ENST00000522122 RPL13P26373 211 aaKnown RBP15.47■□□□□ 0.07
SYNPO-205ENST00000522122 HIBADHP31937 336 aaKnown RBP15.47■□□□□ 0.07
SYNPO-205ENST00000522122 CNNM4Q6P4Q7 775 aa15.47■□□□□ 0.07
SYNPO-205ENST00000522122 NSRP1Q9H0G5 558 aaKnown RBP15.47■□□□□ 0.07
SYNPO-205ENST00000522122 DNAJC10Q8IXB1 793 aa15.47■□□□□ 0.07
SYNPO-205ENST00000522122 A0A1W2PRG0 241 aa15.47■□□□□ 0.07
SYNPO-205ENST00000522122 OTUD6BQ8N6M0 293 aa15.47■□□□□ 0.07
SYNPO-205ENST00000522122 PPP2R2CQ9Y2T4 447 aa15.47■□□□□ 0.07
SYNPO-205ENST00000522122 AKNAD1Q5T1N1 836 aa15.46■□□□□ 0.07
SYNPO-205ENST00000522122 MICALL1Q8N3F8 863 aa15.46■□□□□ 0.07
SYNPO-205ENST00000522122 SPATA5Q8NB90 893 aa15.46■□□□□ 0.07
SYNPO-205ENST00000522122 OAS2P29728 719 aaKnown RBP15.46■□□□□ 0.07
SYNPO-205ENST00000522122 KRBA2Q6ZNG9 492 aa15.46■□□□□ 0.07
SYNPO-205ENST00000522122 NUP58Q9BVL2 599 aa15.46■□□□□ 0.07
SYNPO-205ENST00000522122 FTOQ9C0B1 505 aaKnown RBP eCLIP15.46■□□□□ 0.07
SYNPO-205ENST00000522122 STMN4Q9H169 189 aaPredicted RBP15.46■□□□□ 0.07
SYNPO-205ENST00000522122 IKBKGQ9Y6K9 419 aa15.46■□□□□ 0.07
SYNPO-205ENST00000522122 CIAO1O76071 339 aa15.46■□□□□ 0.06
SYNPO-205ENST00000522122 TCIRG1Q13488 830 aa15.46■□□□□ 0.06
SYNPO-205ENST00000522122 DPCR1Q3MIW9 517 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms