RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 TTC22Q5TAA0 569 aa11.34□□□□□ -0.59
CLK4-209ENST00000521621 GPAT2Q6NUI2 795 aa11.34□□□□□ -0.59
CLK4-209ENST00000521621 CRACR2BQ8N4Y2 399 aaPredicted RBP11.34□□□□□ -0.59
CLK4-209ENST00000521621 ZNF280CQ8ND82 737 aa11.34□□□□□ -0.59
CLK4-209ENST00000521621 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
CLK4-209ENST00000521621 TRIM34Q9BYJ4 488 aa11.34□□□□□ -0.59
CLK4-209ENST00000521621 MCM9Q9NXL9 1143 aa11.34□□□□□ -0.59
CLK4-209ENST00000521621 ZBTB21Q9ULJ3 1066 aa11.34□□□□□ -0.59
CLK4-209ENST00000521621 POLR3DP05423 398 aaPredicted RBP11.34□□□□□ -0.59
CLK4-209ENST00000521621 CENPBP07199 599 aaPredicted RBP11.34□□□□□ -0.59
CLK4-209ENST00000521621 PCP11498 1178 aaKnown RBP11.34□□□□□ -0.59
CLK4-209ENST00000521621 PLCD1P51178 756 aa11.34□□□□□ -0.59
CLK4-209ENST00000521621 MCMDC2Q4G0Z9 681 aa11.34□□□□□ -0.59
CLK4-209ENST00000521621 TSHZ3Q63HK5 1081 aa11.34□□□□□ -0.59
CLK4-209ENST00000521621 NACAP1Q9BZK3 213 aa11.34□□□□□ -0.59
CLK4-209ENST00000521621 ZNF287Q9HBT7 754 aa11.34□□□□□ -0.59
CLK4-209ENST00000521621 A0A0G2JMZ2 1700 aa11.34□□□□□ -0.59
CLK4-209ENST00000521621 GNRH1P01148 92 aa11.33□□□□□ -0.59
CLK4-209ENST00000521621 SDSP20132 328 aa11.33□□□□□ -0.59
CLK4-209ENST00000521621 HOXA7P31268 230 aaPredicted RBP11.33□□□□□ -0.59
CLK4-209ENST00000521621 PKN2Q16513 984 aaKnown RBP11.33□□□□□ -0.59
CLK4-209ENST00000521621 GTF3C2Q8WUA4 911 aaPredicted RBP11.33□□□□□ -0.59
CLK4-209ENST00000521621 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.6
CLK4-209ENST00000521621 SDR42E1Q8WUS8 393 aa11.33□□□□□ -0.6
CLK4-209ENST00000521621 ZFYVE28Q9HCC9 887 aa11.33□□□□□ -0.6
CLK4-209ENST00000521621 AGTPBP1Q9UPW5 1226 aa11.33□□□□□ -0.6
CLK4-209ENST00000521621 USP14P54578 494 aa11.33□□□□□ -0.6
CLK4-209ENST00000521621 CERKLQ49MI3 558 aaPredicted RBP11.33□□□□□ -0.6
CLK4-209ENST00000521621 PPP4R3BQ5MIZ7 849 aa11.33□□□□□ -0.6
CLK4-209ENST00000521621 TMEM179Q6ZVK1 233 aa11.33□□□□□ -0.6
CLK4-209ENST00000521621 IFNL3Q8IZI9 196 aa11.33□□□□□ -0.6
CLK4-209ENST00000521621 KIAA1683Q9H0B3 1180 aa11.33□□□□□ -0.6
CLK4-209ENST00000521621 EPB41L4AQ9HCS5 686 aaPredicted RBP11.33□□□□□ -0.6
CLK4-209ENST00000521621 SAP30BPQ9UHR5 308 aaKnown RBP11.33□□□□□ -0.6
CLK4-209ENST00000521621 ZHX2Q9Y6X8 837 aa11.33□□□□□ -0.6
CLK4-209ENST00000521621 BTBD19C9JJ37 291 aa11.32□□□□□ -0.6
CLK4-209ENST00000521621 PRKAB2O43741 272 aa11.32□□□□□ -0.6
CLK4-209ENST00000521621 BACE1P56817 501 aa11.32□□□□□ -0.6
CLK4-209ENST00000521621 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
CLK4-209ENST00000521621 GPR25O00155 361 aa11.32□□□□□ -0.6
CLK4-209ENST00000521621 FOXP2O15409 715 aa11.32□□□□□ -0.6
CLK4-209ENST00000521621 LBX1P52954 281 aa11.32□□□□□ -0.6
CLK4-209ENST00000521621 ABCB5Q2M3G0 1257 aa11.32□□□□□ -0.6
CLK4-209ENST00000521621 B4GALNT3Q6L9W6 998 aa11.32□□□□□ -0.6
CLK4-209ENST00000521621 USP17L2Q6R6M4 530 aa11.32□□□□□ -0.6
CLK4-209ENST00000521621 LBX2Q6XYB7 198 aa11.32□□□□□ -0.6
CLK4-209ENST00000521621 CCDC171Q6TFL3 1326 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 USP17L12C9JPN9 530 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 USP17L21D6R901 530 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 TLR2O60603 784 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 FKTNO75072 461 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 GUCY1A2P33402 732 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 NOVP48745 357 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 PARK7Q99497 189 aaKnown RBP11.31□□□□□ -0.6
CLK4-209ENST00000521621 CABP5Q9NP86 173 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 PNMA3Q9UL41 463 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 PARP14Q460N5 1801 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 IGKV6D-41A0A0C4DH26 115 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 TRPA1O75762 1119 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 CDK8P49336 464 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 PRMT2P55345 433 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 C17orf99Q6UX52 265 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 FAM43AQ8N2R8 423 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 ERO1AQ96HE7 468 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 DSCC1Q9BVC3 393 aa11.31□□□□□ -0.6
CLK4-209ENST00000521621 USP17L10C9JJH3 530 aa11.3□□□□□ -0.6
CLK4-209ENST00000521621 CHGBP05060 677 aa11.3□□□□□ -0.6
CLK4-209ENST00000521621 SLC3A2P08195 630 aaKnown RBP11.3□□□□□ -0.6
CLK4-209ENST00000521621 JAG1P78504 1218 aa11.3□□□□□ -0.6
CLK4-209ENST00000521621 GRM1Q13255 1194 aa11.3□□□□□ -0.6
CLK4-209ENST00000521621 ARHGEF6Q15052 776 aa11.3□□□□□ -0.6
CLK4-209ENST00000521621 SLFNL1Q499Z3 407 aa11.3□□□□□ -0.6
CLK4-209ENST00000521621 SH2D4AQ9H788 454 aa11.3□□□□□ -0.6
CLK4-209ENST00000521621 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.3□□□□□ -0.6
CLK4-209ENST00000521621 ORC4O43929 436 aa11.3□□□□□ -0.6
CLK4-209ENST00000521621 GSPT1P15170 499 aaKnown RBP11.3□□□□□ -0.6
CLK4-209ENST00000521621 CRHR2Q13324 411 aa11.3□□□□□ -0.6
CLK4-209ENST00000521621 MKL1Q969V6 931 aa11.3□□□□□ -0.6
CLK4-209ENST00000521621 MGAMO43451 1857 aa11.3□□□□□ -0.6
CLK4-209ENST00000521621 RBBP6Q7Z6E9 1792 aaKnown RBP11.3□□□□□ -0.6
CLK4-209ENST00000521621 MYPNQ86TC9 1320 aa11.3□□□□□ -0.6
CLK4-209ENST00000521621 GCLCP48506 637 aaPredicted RBP11.29□□□□□ -0.6
CLK4-209ENST00000521621 NMIQ13287 307 aaPredicted RBP11.29□□□□□ -0.6
CLK4-209ENST00000521621 LPAR1Q92633 364 aa11.29□□□□□ -0.6
CLK4-209ENST00000521621 ZNF236Q9UL36 1845 aa11.29□□□□□ -0.6
CLK4-209ENST00000521621 A0A0D9SFI3 127 aa11.29□□□□□ -0.6
CLK4-209ENST00000521621 PDHXO00330 501 aa11.29□□□□□ -0.6
CLK4-209ENST00000521621 BCRP11274 1271 aa11.29□□□□□ -0.6
CLK4-209ENST00000521621 IRX6P78412 446 aaPredicted RBP11.29□□□□□ -0.6
CLK4-209ENST00000521621 BMP2KLQ5H9B9 411 aa11.29□□□□□ -0.6
CLK4-209ENST00000521621 CTU1Q7Z7A3 348 aaKnown RBP11.29□□□□□ -0.6
CLK4-209ENST00000521621 KANSL2Q9H9L4 492 aa11.29□□□□□ -0.6
CLK4-209ENST00000521621 NYAP2Q9P242 653 aa11.29□□□□□ -0.6
CLK4-209ENST00000521621 MORF4L1Q9UBU8 362 aa11.29□□□□□ -0.6
CLK4-209ENST00000521621 FAM196BA6NMK8 535 aa11.28□□□□□ -0.6
CLK4-209ENST00000521621 GH2P01242 217 aa11.28□□□□□ -0.6
CLK4-209ENST00000521621 CYP2D6P10635 497 aa11.28□□□□□ -0.6
CLK4-209ENST00000521621 TAF1CQ15572 869 aaPredicted RBP11.28□□□□□ -0.6
CLK4-209ENST00000521621 RUFY2Q8WXA3 655 aa11.28□□□□□ -0.6
CLK4-209ENST00000521621 SEC62Q99442 399 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms