RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CRBNQ96SW2 442 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 SLC9A7Q96T83 725 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 TM9SF2Q99805 663 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 TMPRSS13Q9BYE2 586 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 GSX1Q9H4S2 264 aaPredicted RBP5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 ST7Q9NRC1 585 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 USP21Q9UK80 565 aa5.15□□□□□ -1.59
HMGN1P28-201ENST00000521340 MEGF11A6BM72 1044 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 CHURC1-FNTBB4DL54 471 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 DIAPH1O60610 1272 aaKnown RBP5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 AOC2O75106 756 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 IREB2P48200 963 aaKnown RBP5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 LRRFIP1Q32MZ4 808 aaKnown RBP5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 OVOS1Q6IE37 1185 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 UNC5AQ6ZN44 842 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 C12orf40Q86WS4 652 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 TRIM55Q9BYV6 548 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 DISC1Q9NRI5 854 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 TMEM260Q9NX78 707 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 GMIPQ9P107 970 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 ZMYM5Q9UJ78 669 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 PPP1R9AQ9ULJ8 1098 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 MAPK8IP1Q9UQF2 711 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 HIF3AQ9Y2N7 669 aa5.14□□□□□ -1.59
HMGN1P28-201ENST00000521340 DCDC2CA8MYV0 355 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 TMPRSS2O15393 492 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 HYAL3O43820 417 aaPredicted RBP5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 WISP1O95388 367 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 LMNB1P20700 586 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 ERVK-24P63145 666 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 FXNQ16595 210 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 FBXW10Q5XX13 1052 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 C6orf15Q6UXA7 325 aaPredicted RBP5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 KIAA1211Q6ZU35 1233 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 SPATC1Q76KD6 591 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 HDXQ7Z353 690 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 UBE3DQ7Z6J8 389 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 MAP4K3Q8IVH8 894 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 FAM178BQ8IXR5 827 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 ZNF669Q96BR6 464 aaPredicted RBP5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 MEGF10Q96KG7 1140 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 CORO1BQ9BR76 489 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 WNT10AQ9GZT5 417 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 CRIM1Q9NZV1 1036 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 TJP2Q9UDY2 1190 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 SUSD2Q9UGT4 822 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 ADAM30Q9UKF2 790 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 LEMD3Q9Y2U8 911 aa5.13□□□□□ -1.59
HMGN1P28-201ENST00000521340 ESYT3A0FGR9 886 aa5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 ADCY3O60266 1144 aa5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 NEFMP07197 916 aa5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 GRK4P32298 578 aa5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 CD68P34810 354 aaPredicted RBP5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 ARL4DP49703 201 aa5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 NLRP12P59046 1061 aa5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 ZBTB37Q5TC79 503 aa5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 IGF2-ASQ6U949 168 aa5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 NLRC3Q7RTR2 1065 aa5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 MCATQ8IVS2 390 aaKnown RBP5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 ZNF513Q8N8E2 541 aaPredicted RBP5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 UBASH3BQ8TF42 649 aa5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 FBRSQ9HAH7 460 aa5.12□□□□□ -1.59
HMGN1P28-201ENST00000521340 PLCG1P19174 1290 aa5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 CAP2P40123 477 aa5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 LRP8Q14114 963 aa5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 NKG7Q16617 165 aa5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 TKFCQ3LXA3 575 aa5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 PPM1JQ5JR12 505 aa5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 EXOSC6Q5RKV6 272 aaKnown RBP5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 FAM117BQ6P1L5 589 aa5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 MRPL41Q8IXM3 137 aaKnown RBP5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 SLFN12Q8IYM2 578 aa5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 ST13P5Q8NFI4 369 aaPredicted RBP5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 BRINP2Q9C0B6 783 aa5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 SUGCTQ9HAC7 445 aa5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 ZNF214Q9UL59 606 aaPredicted RBP5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 CSADQ9Y600 493 aa5.11□□□□□ -1.59
HMGN1P28-201ENST00000521340 RBAK-RBAKDNI3L0D1 243 aa5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 U2SURPO15042 1029 aaKnown RBP5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 FANCGO15287 622 aa5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 UBOX5O94941 541 aa5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 ALX3O95076 343 aa5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 TIAF1O95411 115 aa5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 SLBPQ14493 270 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 C2orf27AQ580R0 203 aa5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 ARSHQ5FYA8 562 aa5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 LARP1BQ659C4 914 aaKnown RBP5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 TMEM192Q8IY95 271 aa5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 SMG8Q8ND04 991 aaKnown RBP5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 VWCEQ96DN2 955 aa5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 FANCD2OSQ96PS1 177 aa5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 FANCLQ9NW38 375 aa5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 PCDHB10Q9UN67 800 aa5.1□□□□□ -1.59
HMGN1P28-201ENST00000521340 CCDC85CA6NKD9 419 aa5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 RGS13O14921 159 aa5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 HMGB1P09429 215 aaKnown RBP5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 POLR2BP30876 1174 aaKnown RBP5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 PDE3AQ14432 1141 aa5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 PPP2R5EQ16537 467 aa5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 PRR23CQ6ZRP0 262 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms