RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 TREML2Q5T2D2 321 aa13.03□□□□□ -0.32
PVT1-209ENST00000520913 RAET1EQ8TD07 263 aa13.03□□□□□ -0.32
PVT1-209ENST00000520913 WDR18Q9BV38 432 aa13.03□□□□□ -0.32
PVT1-209ENST00000520913 TMEM106CQ9BVX2 250 aa13.03□□□□□ -0.32
PVT1-209ENST00000520913 EHD4Q9H223 541 aa13.03□□□□□ -0.32
PVT1-209ENST00000520913 ZBTB21Q9ULJ3 1066 aa13.03□□□□□ -0.32
PVT1-209ENST00000520913 FRMPD3Q5JV73 1810 aa13.02□□□□□ -0.32
PVT1-209ENST00000520913 MAGEB6P1A0A0J9YX57 407 aa13.02□□□□□ -0.33
PVT1-209ENST00000520913 MTMR2Q13614 643 aa13.02□□□□□ -0.33
PVT1-209ENST00000520913 FAM110CQ1W6H9 321 aa13.02□□□□□ -0.33
PVT1-209ENST00000520913 SLC9C2Q5TAH2 1124 aa13.02□□□□□ -0.33
PVT1-209ENST00000520913 SH3TC2Q8TF17 1288 aa13.02□□□□□ -0.33
PVT1-209ENST00000520913 RIOK1Q9BRS2 568 aaKnown RBP13.02□□□□□ -0.33
PVT1-209ENST00000520913 CRNKL1Q9BZJ0 848 aaKnown RBP13.02□□□□□ -0.33
PVT1-209ENST00000520913 LRRCC1Q9C099 1032 aa13.02□□□□□ -0.33
PVT1-209ENST00000520913 BCL11AQ9H165 835 aa13.02□□□□□ -0.33
PVT1-209ENST00000520913 PAG1Q9NWQ8 432 aa13.02□□□□□ -0.33
PVT1-209ENST00000520913 ATP5JP18859 108 aa13.01□□□□□ -0.33
PVT1-209ENST00000520913 PRPF38BQ5VTL8 546 aaKnown RBP13.01□□□□□ -0.33
PVT1-209ENST00000520913 TTC6Q86TZ1 520 aa13.01□□□□□ -0.33
PVT1-209ENST00000520913 TMOD4Q9NZQ9 345 aa13.01□□□□□ -0.33
PVT1-209ENST00000520913 SERPINB13Q9UIV8 391 aa13.01□□□□□ -0.33
PVT1-209ENST00000520913 ZNF532Q9HCE3 1301 aa13.01□□□□□ -0.33
PVT1-209ENST00000520913 GREB1LQ9C091 1923 aaPredicted RBP13□□□□□ -0.33
PVT1-209ENST00000520913 TCRBV5S4A2TA0A5A2 114 aa13□□□□□ -0.33
PVT1-209ENST00000520913 C19orf81C9J6K1 198 aa13□□□□□ -0.33
PVT1-209ENST00000520913 USP17L10C9JJH3 530 aa13□□□□□ -0.33
PVT1-209ENST00000520913 TNPO2O14787 897 aaKnown RBP13□□□□□ -0.33
PVT1-209ENST00000520913 GRK4P32298 578 aa13□□□□□ -0.33
PVT1-209ENST00000520913 GCLCP48506 637 aaPredicted RBP13□□□□□ -0.33
PVT1-209ENST00000520913 BACE1P56817 501 aa13□□□□□ -0.33
PVT1-209ENST00000520913 PRKCZQ05513 592 aa13□□□□□ -0.33
PVT1-209ENST00000520913 TATDN1Q6P1N9 297 aa13□□□□□ -0.33
PVT1-209ENST00000520913 ANKRD13CQ8N6S4 541 aa13□□□□□ -0.33
PVT1-209ENST00000520913 SLAIN1Q8ND83 568 aa13□□□□□ -0.33
PVT1-209ENST00000520913 DDX24Q9GZR7 859 aaKnown RBP eCLIP13□□□□□ -0.33
PVT1-209ENST00000520913 BOLA2Q9H3K6 86 aa13□□□□□ -0.33
PVT1-209ENST00000520913 MYH4Q9Y623 1939 aa13□□□□□ -0.33
PVT1-209ENST00000520913 COL11A1P12107 1806 aaPredicted RBP12.99□□□□□ -0.33
PVT1-209ENST00000520913 GH2P01242 217 aa12.99□□□□□ -0.33
PVT1-209ENST00000520913 ADD2P35612 726 aa12.99□□□□□ -0.33
PVT1-209ENST00000520913 IRX3P78415 501 aaPredicted RBP12.99□□□□□ -0.33
PVT1-209ENST00000520913 JAG1P78504 1218 aa12.99□□□□□ -0.33
PVT1-209ENST00000520913 SHROOM1Q2M3G4 852 aaPredicted RBP12.99□□□□□ -0.33
PVT1-209ENST00000520913 EDC3Q96F86 508 aaKnown RBP12.99□□□□□ -0.33
PVT1-209ENST00000520913 HAUS7Q99871 368 aa12.99□□□□□ -0.33
PVT1-209ENST00000520913 ASCC2Q9H1I8 757 aaPredicted RBP12.99□□□□□ -0.33
PVT1-209ENST00000520913 RLFQ13129 1914 aa12.99□□□□□ -0.33
PVT1-209ENST00000520913 ZNF236Q9UL36 1845 aa12.98□□□□□ -0.33
PVT1-209ENST00000520913 MYCP01106 439 aaPredicted RBP12.98□□□□□ -0.33
PVT1-209ENST00000520913 POLR3DP05423 398 aaPredicted RBP12.98□□□□□ -0.33
PVT1-209ENST00000520913 EN2P19622 333 aaPredicted RBP12.98□□□□□ -0.33
PVT1-209ENST00000520913 UBXN2AP68543 259 aa12.98□□□□□ -0.33
PVT1-209ENST00000520913 CERKLQ49MI3 558 aaPredicted RBP12.98□□□□□ -0.33
PVT1-209ENST00000520913 LCORLQ8N3X6 602 aa12.98□□□□□ -0.33
PVT1-209ENST00000520913 COA7Q96BR5 231 aa12.98□□□□□ -0.33
PVT1-209ENST00000520913 GPATCH3Q96I76 525 aa12.98□□□□□ -0.33
PVT1-209ENST00000520913 FEZ1Q99689 392 aa12.98□□□□□ -0.33
PVT1-209ENST00000520913 GABRQQ9UN88 632 aa12.98□□□□□ -0.33
PVT1-209ENST00000520913 SMARCA5O60264 1052 aaPredicted RBP12.97□□□□□ -0.33
PVT1-209ENST00000520913 HOXA7P31268 230 aaPredicted RBP12.97□□□□□ -0.33
PVT1-209ENST00000520913 SHMT1P34896 483 aa12.97□□□□□ -0.33
PVT1-209ENST00000520913 PLCD1P51178 756 aa12.97□□□□□ -0.33
PVT1-209ENST00000520913 IRF5Q13568 498 aa12.97□□□□□ -0.33
PVT1-209ENST00000520913 ABCB5Q2M3G0 1257 aa12.97□□□□□ -0.33
PVT1-209ENST00000520913 ZSCAN25Q6NSZ9 544 aa12.97□□□□□ -0.33
PVT1-209ENST00000520913 USP17L2Q6R6M4 530 aa12.97□□□□□ -0.33
PVT1-209ENST00000520913 GTF3C2Q8WUA4 911 aaPredicted RBP12.97□□□□□ -0.33
PVT1-209ENST00000520913 SDR42E1Q8WUS8 393 aa12.97□□□□□ -0.33
PVT1-209ENST00000520913 C12orf42Q96LP6 360 aa12.97□□□□□ -0.33
PVT1-209ENST00000520913 CABP5Q9NP86 173 aa12.97□□□□□ -0.33
PVT1-209ENST00000520913 DCP1AQ9NPI6 582 aaPredicted RBP12.97□□□□□ -0.33
PVT1-209ENST00000520913 MCM9Q9NXL9 1143 aa12.97□□□□□ -0.33
PVT1-209ENST00000520913 MORF4L1Q9UBU8 362 aa12.97□□□□□ -0.33
PVT1-209ENST00000520913 BIN2Q9UBW5 565 aaPredicted RBP12.97□□□□□ -0.33
PVT1-209ENST00000520913 ALPK3Q96L96 1907 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 ADCY3O60266 1144 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 MBD4O95243 580 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 FLT3LGP49771 235 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 USP14P54578 494 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 RRP1P56182 461 aaKnown RBP12.96□□□□□ -0.33
PVT1-209ENST00000520913 HERVK_113P62684 666 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 GABPAQ06546 454 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 RAB3GAP1Q15042 981 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 MTFR1Q15390 333 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 NKX2-3Q8TAU0 364 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 PXYLP1Q8TE99 480 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 ARMT1Q9H993 441 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 ATP8A2Q9NTI2 1148 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 ECHDC1Q9NTX5 307 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 TAOK2Q9UL54 1235 aa12.96□□□□□ -0.33
PVT1-209ENST00000520913 CCL5P13501 91 aa12.95□□□□□ -0.34
PVT1-209ENST00000520913 UBE3CQ15386 1083 aa12.95□□□□□ -0.34
PVT1-209ENST00000520913 ZYXQ15942 572 aaKnown RBP12.95□□□□□ -0.34
PVT1-209ENST00000520913 AMOTL1Q8IY63 956 aa12.95□□□□□ -0.34
PVT1-209ENST00000520913 DDRGK1Q96HY6 314 aa12.95□□□□□ -0.34
PVT1-209ENST00000520913 KIAA1683Q9H0B3 1180 aa12.95□□□□□ -0.34
PVT1-209ENST00000520913 DCTPP1Q9H773 170 aa12.95□□□□□ -0.34
PVT1-209ENST00000520913 SWAP70Q9UH65 585 aa12.95□□□□□ -0.34
PVT1-209ENST00000520913 PLXNA1Q9UIW2 1896 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms