RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 CUL4AQ13619 759 aa9.96□□□□□ -0.82
SHPRH-208ENST00000520752 ZNF513Q8N8E2 541 aaPredicted RBP9.96□□□□□ -0.82
SHPRH-208ENST00000520752 BICD2Q8TD16 824 aa9.96□□□□□ -0.82
SHPRH-208ENST00000520752 UBXN4Q92575 508 aa9.96□□□□□ -0.82
SHPRH-208ENST00000520752 ALKBH8Q96BT7 664 aaKnown RBP9.96□□□□□ -0.82
SHPRH-208ENST00000520752 MBIPQ9NS73 344 aa9.96□□□□□ -0.82
SHPRH-208ENST00000520752 HOMER3Q9NSC5 361 aa9.96□□□□□ -0.82
SHPRH-208ENST00000520752 RRP7BPQ9NSQ0 103 aa9.96□□□□□ -0.82
SHPRH-208ENST00000520752 ORC3Q9UBD5 711 aaPredicted RBP9.96□□□□□ -0.82
SHPRH-208ENST00000520752 MCM8Q9UJA3 840 aa9.96□□□□□ -0.82
SHPRH-208ENST00000520752 NSFL1CQ9UNZ2 370 aaKnown RBP9.96□□□□□ -0.82
SHPRH-208ENST00000520752 ATP6V1DQ9Y5K8 247 aa9.96□□□□□ -0.82
SHPRH-208ENST00000520752 RAD54L2Q9Y4B4 1467 aa9.96□□□□□ -0.82
SHPRH-208ENST00000520752 PRDM15P57071 1507 aaPredicted RBP9.96□□□□□ -0.82
SHPRH-208ENST00000520752 EFCAB8A8MWE9 144 aa9.95□□□□□ -0.82
SHPRH-208ENST00000520752 CHUKO15111 745 aa9.95□□□□□ -0.82
SHPRH-208ENST00000520752 CASTP20810 708 aaKnown RBP9.95□□□□□ -0.82
SHPRH-208ENST00000520752 HNRNPH1P31943 449 aaKnown RBP9.95□□□□□ -0.82
SHPRH-208ENST00000520752 NF2P35240 595 aa9.95□□□□□ -0.82
SHPRH-208ENST00000520752 PREPLQ4J6C6 727 aaPredicted RBP9.95□□□□□ -0.82
SHPRH-208ENST00000520752 KIAA1328Q86T90 577 aa9.95□□□□□ -0.82
SHPRH-208ENST00000520752 CHD1LQ86WJ1 897 aa9.95□□□□□ -0.82
SHPRH-208ENST00000520752 PLA2G4DQ86XP0 818 aa9.95□□□□□ -0.82
SHPRH-208ENST00000520752 CCDC26Q8TAB7 109 aa9.95□□□□□ -0.82
SHPRH-208ENST00000520752 ZNF775Q96BV0 537 aaPredicted RBP9.95□□□□□ -0.82
SHPRH-208ENST00000520752 COL25A1Q9BXS0 654 aaPredicted RBP9.95□□□□□ -0.82
SHPRH-208ENST00000520752 ELP3Q9H9T3 547 aa9.95□□□□□ -0.82
SHPRH-208ENST00000520752 AVENQ9NQS1 362 aaPredicted RBP9.95□□□□□ -0.82
SHPRH-208ENST00000520752 CPSF2Q9P2I0 782 aaKnown RBP9.95□□□□□ -0.82
SHPRH-208ENST00000520752 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.95□□□□□ -0.82
SHPRH-208ENST00000520752 IGF1RP08069 1367 aa9.95□□□□□ -0.82
SHPRH-208ENST00000520752 PTPRGP23470 1445 aa9.95□□□□□ -0.82
SHPRH-208ENST00000520752 PZPP20742 1482 aa9.95□□□□□ -0.82
SHPRH-208ENST00000520752 CEP170Q5SW79 1584 aa9.95□□□□□ -0.82
SHPRH-208ENST00000520752 AK9Q5TCS8 1911 aa9.95□□□□□ -0.82
SHPRH-208ENST00000520752 KDRP35968 1356 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 CARMIL1Q5VZK9 1371 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 TREHO43280 583 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 SASH3O75995 380 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 NEBLO76041 1014 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 MAP3K6O95382 1288 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 TUBBP07437 444 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 BMP4P12644 408 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 ZNF75DP51815 510 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 INHBEP58166 350 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 DSC3Q14574 896 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 BRD3Q15059 726 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 ARHGAP29Q52LW3 1261 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 RNFT1Q5M7Z0 435 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 ZNF438Q7Z4V0 828 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 DZIP1LQ8IYY4 767 aaKnown RBP9.94□□□□□ -0.82
SHPRH-208ENST00000520752 ACBD3Q9H3P7 528 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 ARFGAP3Q9NP61 516 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 RPS6KL1Q9Y6S9 549 aa9.94□□□□□ -0.82
SHPRH-208ENST00000520752 PHLPP2Q6ZVD8 1323 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 A6NHS1 94 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 GPR182O15218 404 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 KINO60870 393 aaKnown RBP9.93□□□□□ -0.82
SHPRH-208ENST00000520752 PPFIA2O75334 1257 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 TARSP26639 723 aaKnown RBP9.93□□□□□ -0.82
SHPRH-208ENST00000520752 MAP2K3P46734 347 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 CD151P48509 253 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 GSDMDP57764 484 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 COL19A1Q14993 1142 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 SLC5A9Q2M3M2 681 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 ZNF468Q5VIY5 522 aaPredicted RBP9.93□□□□□ -0.82
SHPRH-208ENST00000520752 SARM1Q6SZW1 724 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 SPATS2Q86XZ4 545 aaKnown RBP9.93□□□□□ -0.82
SHPRH-208ENST00000520752 CCDC50Q8IVM0 306 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 PNMA5Q96PV4 448 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 TSPAN18Q96SJ8 248 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 BATF3Q9NR55 127 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 PRR12Q9ULL5 1215 aa9.93□□□□□ -0.82
SHPRH-208ENST00000520752 SOS1Q07889 1333 aaPredicted RBP9.92□□□□□ -0.82
SHPRH-208ENST00000520752 TTC41PQ6P2S7 1318 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 U2SURPO15042 1029 aaKnown RBP9.92□□□□□ -0.82
SHPRH-208ENST00000520752 SRGAP3O43295 1099 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 WFS1O76024 890 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 SNUPNO95149 360 aaKnown RBP9.92□□□□□ -0.82
SHPRH-208ENST00000520752 TBC1D8O95759 1140 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 GPTP24298 496 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 SLC8A3P57103 927 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 KRT76Q01546 638 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 PLCB3Q01970 1234 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 WLSQ5T9L3 541 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 CC2D1AQ6P1N0 951 aaPredicted RBP9.92□□□□□ -0.82
SHPRH-208ENST00000520752 DRC7Q8IY82 874 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 CCAR2Q8N163 923 aaKnown RBP9.92□□□□□ -0.82
SHPRH-208ENST00000520752 TDRD7Q8NHU6 1098 aaKnown RBP9.92□□□□□ -0.82
SHPRH-208ENST00000520752 CTCFLQ8NI51 663 aaPredicted RBP9.92□□□□□ -0.82
SHPRH-208ENST00000520752 MAGEC3Q8TD91 643 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 HNRNPLLQ8WVV9 542 aaKnown RBP9.92□□□□□ -0.82
SHPRH-208ENST00000520752 MRFAP1L1Q96HT8 127 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 CABS1Q96KC9 395 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 ZFATQ9P243 1243 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 ITSN2Q9NZM3 1697 aa9.92□□□□□ -0.82
SHPRH-208ENST00000520752 MYOM2P54296 1465 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 RTL1A6NKG5 1358 aa9.91□□□□□ -0.82
SHPRH-208ENST00000520752 POLR3AO14802 1390 aaPredicted RBP9.91□□□□□ -0.82
SHPRH-208ENST00000520752 A6NNZ2 444 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms