RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 CYP2D6P10635 497 aa29.68■■■□□ 2.34
COL13A1-213ENST00000520267 ZRSR1Q15695 479 aaKnown RBP29.68■■■□□ 2.34
COL13A1-213ENST00000520267 OXER1Q8TDS5 423 aa29.68■■■□□ 2.34
COL13A1-213ENST00000520267 ATP8A2Q9NTI2 1148 aa29.68■■■□□ 2.34
COL13A1-213ENST00000520267 ANKIB1Q9P2G1 1089 aa29.68■■■□□ 2.34
COL13A1-213ENST00000520267 NLRP12P59046 1061 aa29.67■■■□□ 2.34
COL13A1-213ENST00000520267 RBM6P78332 1123 aaKnown RBP29.67■■■□□ 2.34
COL13A1-213ENST00000520267 FUT2Q10981 343 aa29.67■■■□□ 2.34
COL13A1-213ENST00000520267 DNTTIP2Q5QJE6 756 aaKnown RBP29.67■■■□□ 2.34
COL13A1-213ENST00000520267 PKN1Q16512 942 aa29.66■■■□□ 2.34
COL13A1-213ENST00000520267 CCDC144BQ3MJ40 725 aa29.66■■■□□ 2.34
COL13A1-213ENST00000520267 MEX3CQ5U5Q3 659 aaKnown RBP29.66■■■□□ 2.34
COL13A1-213ENST00000520267 CNBD1Q8NA66 436 aa29.66■■■□□ 2.34
COL13A1-213ENST00000520267 MRFAP1L1Q96HT8 127 aa29.66■■■□□ 2.34
COL13A1-213ENST00000520267 ORC4O43929 436 aa29.66■■■□□ 2.34
COL13A1-213ENST00000520267 PLEKHA8P1O95397 391 aa29.66■■■□□ 2.34
COL13A1-213ENST00000520267 LRMPQ12912 555 aa29.66■■■□□ 2.34
COL13A1-213ENST00000520267 TROAPQ12815 778 aa29.65■■■□□ 2.34
COL13A1-213ENST00000520267 hCG_1642624A0A1W2PR95 340 aa29.65■■■□□ 2.34
COL13A1-213ENST00000520267 NMT2O60551 498 aa29.65■■■□□ 2.34
COL13A1-213ENST00000520267 RILPL1Q5EBL4 403 aa29.65■■■□□ 2.34
COL13A1-213ENST00000520267 DZIP1Q86YF9 867 aaKnown RBP29.65■■■□□ 2.34
COL13A1-213ENST00000520267 KRI1Q8N9T8 703 aaKnown RBP29.65■■■□□ 2.34
COL13A1-213ENST00000520267 BPIFA3Q9BQP9 254 aa29.65■■■□□ 2.34
COL13A1-213ENST00000520267 ZBTB22O15209 634 aa29.64■■■□□ 2.34
COL13A1-213ENST00000520267 AKAP17AQ02040 695 aaKnown RBP29.64■■■□□ 2.34
COL13A1-213ENST00000520267 FAM47AQ5JRC9 791 aa29.64■■■□□ 2.34
COL13A1-213ENST00000520267 SPTY2D1Q68D10 685 aaPredicted RBP29.64■■■□□ 2.33
COL13A1-213ENST00000520267 VPS54Q9P1Q0 977 aa29.64■■■□□ 2.33
COL13A1-213ENST00000520267 ARPP21Q9UBL0 812 aaPredicted RBP29.64■■■□□ 2.33
COL13A1-213ENST00000520267 LEMD3Q9Y2U8 911 aa29.64■■■□□ 2.33
COL13A1-213ENST00000520267 PCDHB6Q9Y5E3 794 aa29.64■■■□□ 2.33
COL13A1-213ENST00000520267 PRPF3O43395 683 aaKnown RBP29.63■■■□□ 2.33
COL13A1-213ENST00000520267 SBK1Q52WX2 424 aa29.63■■■□□ 2.33
COL13A1-213ENST00000520267 RBM28Q9NW13 759 aaKnown RBP29.63■■■□□ 2.33
COL13A1-213ENST00000520267 AFF2P51816 1311 aa29.63■■■□□ 2.33
COL13A1-213ENST00000520267 GRIN1Q05586 938 aa29.62■■■□□ 2.33
COL13A1-213ENST00000520267 SPECC1Q5M775 1068 aa29.62■■■□□ 2.33
COL13A1-213ENST00000520267 ISM2Q6H9L7 571 aa29.62■■■□□ 2.33
COL13A1-213ENST00000520267 TUBE1Q9UJT0 475 aa29.62■■■□□ 2.33
COL13A1-213ENST00000520267 V9GY48 417 aaPredicted RBP29.62■■■□□ 2.33
COL13A1-213ENST00000520267 CALM1P0DP23 149 aa29.62■■■□□ 2.33
COL13A1-213ENST00000520267 CALM2P0DP24 149 aa29.62■■■□□ 2.33
COL13A1-213ENST00000520267 CALM3P0DP25 149 aa29.62■■■□□ 2.33
COL13A1-213ENST00000520267 LONRF3Q496Y0 759 aa29.62■■■□□ 2.33
COL13A1-213ENST00000520267 PRR5LQ6MZQ0 368 aa29.62■■■□□ 2.33
COL13A1-213ENST00000520267 SEPT12Q8IYM1 358 aa29.62■■■□□ 2.33
COL13A1-213ENST00000520267 GPR101Q96P66 508 aaPredicted RBP29.62■■■□□ 2.33
COL13A1-213ENST00000520267 FBXO2Q9UK22 296 aaPredicted RBP29.62■■■□□ 2.33
COL13A1-213ENST00000520267 KCNH3Q9ULD8 1083 aa29.62■■■□□ 2.33
COL13A1-213ENST00000520267 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.61■■■□□ 2.33
COL13A1-213ENST00000520267 ONECUT3O60422 494 aaPredicted RBP29.61■■■□□ 2.33
COL13A1-213ENST00000520267 DDAH1O94760 285 aa29.61■■■□□ 2.33
COL13A1-213ENST00000520267 TMED8Q6PL24 325 aaPredicted RBP29.61■■■□□ 2.33
COL13A1-213ENST00000520267 CACTINQ8WUQ7 758 aaKnown RBP29.61■■■□□ 2.33
COL13A1-213ENST00000520267 CABP5Q9NP86 173 aa29.61■■■□□ 2.33
COL13A1-213ENST00000520267 PNOCQ13519 176 aa29.61■■■□□ 2.33
COL13A1-213ENST00000520267 XDHP47989 1333 aa29.61■■■□□ 2.33
COL13A1-213ENST00000520267 USP17L8P0C7I0 530 aa29.6■■■□□ 2.33
COL13A1-213ENST00000520267 PTPREP23469 700 aa29.6■■■□□ 2.33
COL13A1-213ENST00000520267 SLC4A8Q2Y0W8 1093 aa29.6■■■□□ 2.33
COL13A1-213ENST00000520267 PHF20Q9BVI0 1012 aa29.6■■■□□ 2.33
COL13A1-213ENST00000520267 MCM9Q9NXL9 1143 aa29.6■■■□□ 2.33
COL13A1-213ENST00000520267 UBR3Q6ZT12 1888 aa29.6■■■□□ 2.33
COL13A1-213ENST00000520267 UQCRHLA0A096LP55 91 aa29.6■■■□□ 2.33
COL13A1-213ENST00000520267 LDHBP07195 334 aaKnown RBP29.6■■■□□ 2.33
COL13A1-213ENST00000520267 UQCRHP07919 91 aa29.6■■■□□ 2.33
COL13A1-213ENST00000520267 ATP2B1P20020 1258 aa29.6■■■□□ 2.33
COL13A1-213ENST00000520267 GRIK5Q16478 980 aa29.6■■■□□ 2.33
COL13A1-213ENST00000520267 KRBA2Q6ZNG9 492 aa29.6■■■□□ 2.33
COL13A1-213ENST00000520267 TMTC3Q6ZXV5 915 aa29.6■■■□□ 2.33
COL13A1-213ENST00000520267 METTL16Q86W50 562 aaKnown RBP29.6■■■□□ 2.33
COL13A1-213ENST00000520267 WDR66Q8TBY9 1149 aa29.6■■■□□ 2.33
COL13A1-213ENST00000520267 BCL11BQ9C0K0 894 aaPredicted RBP29.6■■■□□ 2.33
COL13A1-213ENST00000520267 FAM205CA6NFA0 338 aa29.59■■■□□ 2.33
COL13A1-213ENST00000520267 XBP1P17861 261 aa29.59■■■□□ 2.33
COL13A1-213ENST00000520267 PDE4BQ07343 736 aa29.58■■■□□ 2.33
COL13A1-213ENST00000520267 ADRA2BP18089 450 aa29.57■■■□□ 2.32
COL13A1-213ENST00000520267 NCAPHQ15003 741 aa29.57■■■□□ 2.32
COL13A1-213ENST00000520267 CNNM3Q8NE01 707 aa29.57■■■□□ 2.32
COL13A1-213ENST00000520267 UBE2Q2Q8WVN8 375 aa29.57■■■□□ 2.32
COL13A1-213ENST00000520267 MKRN1Q9UHC7 482 aaKnown RBP29.57■■■□□ 2.32
COL13A1-213ENST00000520267 GPSM2P81274 684 aa29.57■■■□□ 2.32
COL13A1-213ENST00000520267 EARS2Q5JPH6 523 aaKnown RBP29.57■■■□□ 2.32
COL13A1-213ENST00000520267 SRBD1Q8N5C6 995 aaKnown RBP29.57■■■□□ 2.32
COL13A1-213ENST00000520267 SH3RF3Q8TEJ3 882 aaPredicted RBP29.57■■■□□ 2.32
COL13A1-213ENST00000520267 CNTNAP5Q8WYK1 1306 aa29.56■■■□□ 2.32
COL13A1-213ENST00000520267 TSPY2A6NKD2 308 aa29.56■■■□□ 2.32
COL13A1-213ENST00000520267 GYS1P13807 737 aa29.56■■■□□ 2.32
COL13A1-213ENST00000520267 KRT2P35908 639 aa29.56■■■□□ 2.32
COL13A1-213ENST00000520267 ARID5BQ14865 1188 aa29.56■■■□□ 2.32
COL13A1-213ENST00000520267 FOXP4Q8IVH2 680 aaPredicted RBP29.56■■■□□ 2.32
COL13A1-213ENST00000520267 RPGRQ92834 1020 aaKnown RBP29.56■■■□□ 2.32
COL13A1-213ENST00000520267 DIXDC1Q155Q3 683 aa29.56■■■□□ 2.32
COL13A1-213ENST00000520267 ZNF804AQ7Z570 1209 aa29.56■■■□□ 2.32
COL13A1-213ENST00000520267 CTCFLQ8NI51 663 aaPredicted RBP29.56■■■□□ 2.32
COL13A1-213ENST00000520267 USP5P45974 858 aa29.55■■■□□ 2.32
COL13A1-213ENST00000520267 SRPRBQ9Y5M8 271 aaKnown RBP29.55■■■□□ 2.32
COL13A1-213ENST00000520267 FOXN1O15353 648 aa29.55■■■□□ 2.32
COL13A1-213ENST00000520267 C12orf60Q5U649 245 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms