RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 IQUBQ8NA54 791 aa9.65□□□□□ -0.86
CSMD1-206ENST00000520002 VTI1AQ96AJ9 217 aa9.65□□□□□ -0.86
CSMD1-206ENST00000520002 I3L4J1 428 aa9.65□□□□□ -0.87
CSMD1-206ENST00000520002 ZC4H2Q9NQZ6 224 aa9.65□□□□□ -0.87
CSMD1-206ENST00000520002 SLC4A7Q9Y6M7 1214 aa9.65□□□□□ -0.87
CSMD1-206ENST00000520002 CWF19L2Q2TBE0 894 aaKnown RBP9.65□□□□□ -0.87
CSMD1-206ENST00000520002 CEBPAP49715 358 aaPredicted RBP9.65□□□□□ -0.87
CSMD1-206ENST00000520002 CCDC14Q49A88 953 aa9.65□□□□□ -0.87
CSMD1-206ENST00000520002 KCNV2Q8TDN2 545 aa9.65□□□□□ -0.87
CSMD1-206ENST00000520002 USP26Q9BXU7 913 aa9.65□□□□□ -0.87
CSMD1-206ENST00000520002 PDHA1P08559 390 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 MX2P20592 715 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 CALCOCO2Q13137 446 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 DTHD1Q6ZMT9 781 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 DHX32Q7L7V1 743 aaKnown RBP9.64□□□□□ -0.87
CSMD1-206ENST00000520002 TTF2Q9UNY4 1162 aaKnown RBP9.64□□□□□ -0.87
CSMD1-206ENST00000520002 KIF1CO43896 1103 aaKnown RBP9.64□□□□□ -0.87
CSMD1-206ENST00000520002 PPFIA2O75334 1257 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 PDCD7Q8N8D1 485 aaKnown RBP9.64□□□□□ -0.87
CSMD1-206ENST00000520002 CNGA1P29973 690 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 ZNF174Q15697 407 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 HELBQ8NG08 1087 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-206ENST00000520002 CEP70Q8NHQ1 597 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 PALMDQ9NP74 551 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 RGS16O15492 202 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-206ENST00000520002 GNA11P29992 359 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 NIP7Q9Y221 180 aaKnown RBP eCLIP9.64□□□□□ -0.87
CSMD1-206ENST00000520002 DUOX2Q9NRD8 1548 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 ZKSCAN3Q9BRR0 538 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 TRAF5O00463 557 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 ZMYND10O75800 440 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 MSANTD4Q8NCY6 345 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 TERF2Q15554 542 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 TAOK1Q7L7X3 1001 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 VPS16Q9H269 839 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 MAP3K5Q99683 1374 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 ADKP55263 362 aaKnown RBP9.64□□□□□ -0.87
CSMD1-206ENST00000520002 PROCA1Q8NCQ7 364 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-206ENST00000520002 CHAMP1Q96JM3 812 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 NOX5Q96PH1 765 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 TRIM35Q9UPQ4 493 aa9.64□□□□□ -0.87
CSMD1-206ENST00000520002 PARP1P09874 1014 aaKnown RBP9.63□□□□□ -0.87
CSMD1-206ENST00000520002 HARSP12081 509 aaKnown RBP9.63□□□□□ -0.87
CSMD1-206ENST00000520002 FBXO38Q6PIJ6 1188 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 DDX41Q9UJV9 622 aaKnown RBP9.63□□□□□ -0.87
CSMD1-206ENST00000520002 PRAG1Q86YV5 1406 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 CHMP2AO43633 222 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 RNF40O75150 1001 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 XPO4Q9C0E2 1151 aaKnown RBP9.63□□□□□ -0.87
CSMD1-206ENST00000520002 PLCB1Q9NQ66 1216 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 PARD3Q8TEW0 1356 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 MYO10Q9HD67 2058 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 SH3BP5O60239 455 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 CHMLP26374 656 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 INF2Q27J81 1249 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 TADA2BQ86TJ2 420 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 OGFOD1Q8N543 542 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 GPT2Q8TD30 523 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 C14orf93Q9H972 538 aaKnown RBP9.63□□□□□ -0.87
CSMD1-206ENST00000520002 SCOCQ9UIL1 159 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 LAMC3Q9Y6N6 1575 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 SPOPO43791 374 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 LARSQ9P2J5 1176 aaKnown RBP9.63□□□□□ -0.87
CSMD1-206ENST00000520002 ZRANB1Q9UGI0 708 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 EIF3CLB5ME19 914 aaKnown RBP9.63□□□□□ -0.87
CSMD1-206ENST00000520002 RASA3Q14644 834 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 EIF3CQ99613 913 aaKnown RBP9.63□□□□□ -0.87
CSMD1-206ENST00000520002 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-206ENST00000520002 CEP104O60308 925 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 GMNNO75496 209 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 CRCPO75575 148 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 PLCG2P16885 1265 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 NRBP1Q9UHY1 535 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 ZNF711Q9Y462 761 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 ZMYM4Q5VZL5 1548 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 BAZ2BQ9UIF8 2168 aaKnown RBP9.63□□□□□ -0.87
CSMD1-206ENST00000520002 EPB41P11171 864 aaKnown RBP9.63□□□□□ -0.87
CSMD1-206ENST00000520002 GOLGA8FQ08AF8 430 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 GOLGA8DPQ0D2H9 430 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 BIRC3Q13489 604 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 MTUS1Q9ULD2 1270 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 NUB1Q9Y5A7 615 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 SERPINB6P35237 376 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 CLCN6P51797 869 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 CLUL1Q15846 466 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 USP6NLQ92738 828 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 GRM1Q13255 1194 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 CFAP61Q8NHU2 1237 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 VCX3AQ9NNX9 186 aa9.63□□□□□ -0.87
CSMD1-206ENST00000520002 EFCAB8A8MWE9 144 aa9.62□□□□□ -0.87
CSMD1-206ENST00000520002 BACH1O14867 736 aa9.62□□□□□ -0.87
CSMD1-206ENST00000520002 PNMA6AP0CW24 399 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-206ENST00000520002 DYDC2Q96IM9 177 aa9.62□□□□□ -0.87
CSMD1-206ENST00000520002 MAPK8IP1Q9UQF2 711 aa9.62□□□□□ -0.87
CSMD1-206ENST00000520002 PTPROQ16827 1216 aa9.62□□□□□ -0.87
CSMD1-206ENST00000520002 LEO1Q8WVC0 666 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-206ENST00000520002 TRIM6Q9C030 488 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-206ENST00000520002 ATG3Q9NT62 314 aa9.62□□□□□ -0.87
CSMD1-206ENST00000520002 CCNT1O60563 726 aaKnown RBP9.62□□□□□ -0.87
CSMD1-206ENST00000520002 SNX16P57768 344 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms