RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 SHTN1A0MZ66 631 aa17.51■□□□□ 0.39
PABPC1-210ENST00000519363 CCDC69A6NI79 296 aa17.51■□□□□ 0.39
PABPC1-210ENST00000519363 STK3Q13188 491 aa17.51■□□□□ 0.39
PABPC1-210ENST00000519363 NFXL1Q6ZNB6 911 aa17.51■□□□□ 0.39
PABPC1-210ENST00000519363 SH3BP5LQ7L8J4 393 aa17.51■□□□□ 0.39
PABPC1-210ENST00000519363 ZFPM1Q8IX07 1006 aa17.51■□□□□ 0.39
PABPC1-210ENST00000519363 NEDD1Q8NHV4 660 aa17.51■□□□□ 0.39
PABPC1-210ENST00000519363 ANKS1AQ92625 1134 aa17.51■□□□□ 0.39
PABPC1-210ENST00000519363 SENP2Q9HC62 589 aa17.51■□□□□ 0.39
PABPC1-210ENST00000519363 PI4KBQ9UBF8 816 aa17.51■□□□□ 0.39
PABPC1-210ENST00000519363 CNOT7Q9UIV1 285 aaKnown RBP17.51■□□□□ 0.39
PABPC1-210ENST00000519363 CLRN2A0PK11 232 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 DDTLA6NHG4 134 aaPredicted RBP17.5■□□□□ 0.39
PABPC1-210ENST00000519363 ZBTB43O43298 467 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 DHX16O60231 1041 aaKnown RBP17.5■□□□□ 0.39
PABPC1-210ENST00000519363 GRIN3BO60391 1043 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 TSPY3P0CV98 308 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 TSPY8P0CW00 308 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 SHMT1P34896 483 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 NUCB2P80303 420 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 TFAP4Q01664 338 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 TCP10Q12799 353 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 FAM47AQ5JRC9 791 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 IFIT1BQ5T764 474 aaKnown RBP17.5■□□□□ 0.39
PABPC1-210ENST00000519363 DGKHQ86XP1 1220 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 FOXP4Q8IVH2 680 aaPredicted RBP17.5■□□□□ 0.39
PABPC1-210ENST00000519363 SMARCC2Q8TAQ2 1214 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 ZKSCAN3Q9BRR0 538 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 GPRC5DQ9NZD1 345 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 SLC12A7Q9Y666 1083 aa17.5■□□□□ 0.39
PABPC1-210ENST00000519363 DDAH1O94760 285 aa17.49■□□□□ 0.39
PABPC1-210ENST00000519363 PDIA4P13667 645 aaKnown RBP17.49■□□□□ 0.39
PABPC1-210ENST00000519363 NOVP48745 357 aa17.49■□□□□ 0.39
PABPC1-210ENST00000519363 METAP2P50579 478 aaKnown RBP eCLIP17.49■□□□□ 0.392e-36■□□□□ 11.2
PABPC1-210ENST00000519363 HMGN5P82970 282 aaKnown RBP17.49■□□□□ 0.39
PABPC1-210ENST00000519363 TNFAIP1Q13829 316 aa17.49■□□□□ 0.39
PABPC1-210ENST00000519363 PPP2R5BQ15173 497 aa17.49■□□□□ 0.39
PABPC1-210ENST00000519363 KIF4BQ2VIQ3 1234 aa17.49■□□□□ 0.39
PABPC1-210ENST00000519363 NBPF9Q3BBW0 867 aa17.49■□□□□ 0.39
PABPC1-210ENST00000519363 C9orf131Q5VYM1 1079 aa17.49■□□□□ 0.39
PABPC1-210ENST00000519363 SYNE3Q6ZMZ3 975 aa17.49■□□□□ 0.39
PABPC1-210ENST00000519363 ZNF654Q8IZM8 581 aa17.49■□□□□ 0.39
PABPC1-210ENST00000519363 DNAJC18Q9H819 358 aa17.49■□□□□ 0.39
PABPC1-210ENST00000519363 MYH4Q9Y623 1939 aa17.49■□□□□ 0.39
PABPC1-210ENST00000519363 UTRNP46939 3433 aa17.49■□□□□ 0.39
PABPC1-210ENST00000519363 H7C1D1 291 aa17.48■□□□□ 0.39
PABPC1-210ENST00000519363 GJB2P29033 226 aa17.48■□□□□ 0.39
PABPC1-210ENST00000519363 TNNI2P48788 182 aa17.48■□□□□ 0.39
PABPC1-210ENST00000519363 RAB3GAP1Q15042 981 aa17.48■□□□□ 0.39
PABPC1-210ENST00000519363 RCSD1Q6JBY9 416 aa17.48■□□□□ 0.39
PABPC1-210ENST00000519363 NSUN7Q8NE18 718 aaKnown RBP17.48■□□□□ 0.39
PABPC1-210ENST00000519363 CCDC17Q96LX7 622 aa17.48■□□□□ 0.39
PABPC1-210ENST00000519363 VEZTQ9HBM0 779 aa17.48■□□□□ 0.39
PABPC1-210ENST00000519363 IL17RBQ9NRM6 502 aa17.48■□□□□ 0.39
PABPC1-210ENST00000519363 HERC5Q9UII4 1024 aaKnown RBP17.48■□□□□ 0.39
PABPC1-210ENST00000519363 NAP1L2Q9ULW6 460 aaPredicted RBP17.48■□□□□ 0.39
PABPC1-210ENST00000519363 MYH6P13533 1939 aa17.48■□□□□ 0.39
PABPC1-210ENST00000519363 IGKV6D-41A0A0C4DH26 115 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 GOLGA8AA7E2F4 631 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 TCP10L2B9ZVM9 353 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 CTDNEP1O95476 244 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 EGFRP00533 1210 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 CALM1P0DP23 149 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 CALM2P0DP24 149 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 CALM3P0DP25 149 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 PDCP20941 246 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 CCT2P78371 535 aaKnown RBP17.47■□□□□ 0.39
PABPC1-210ENST00000519363 GPR162Q16538 588 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 PPP4R3BQ5MIZ7 849 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 TATDN1Q6P1N9 297 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 MICU3Q86XE3 530 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 ZSCAN29Q8IWY8 852 aaPredicted RBP17.47■□□□□ 0.39
PABPC1-210ENST00000519363 CRACR2BQ8N4Y2 399 aaPredicted RBP17.47■□□□□ 0.39
PABPC1-210ENST00000519363 CSRNP1Q96S65 589 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 NCOA5Q9HCD5 579 aaKnown RBP17.47■□□□□ 0.39
PABPC1-210ENST00000519363 KIF3AQ9Y496 699 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 SCN4AP35499 1836 aa17.47■□□□□ 0.39
PABPC1-210ENST00000519363 PTPDC1A2A3K4 754 aa17.46■□□□□ 0.39
PABPC1-210ENST00000519363 NMT2O60551 498 aa17.46■□□□□ 0.39
PABPC1-210ENST00000519363 CDKL5O76039 1030 aa17.46■□□□□ 0.39
PABPC1-210ENST00000519363 TBC1D10BQ4KMP7 808 aaPredicted RBP17.46■□□□□ 0.39
PABPC1-210ENST00000519363 CPLX2Q6PUV4 134 aaKnown RBP17.46■□□□□ 0.39
PABPC1-210ENST00000519363 SAMD7Q7Z3H4 446 aa17.46■□□□□ 0.39
PABPC1-210ENST00000519363 CATIPQ7Z7H3 387 aa17.46■□□□□ 0.39
PABPC1-210ENST00000519363 MAP3K14Q99558 947 aa17.46■□□□□ 0.39
PABPC1-210ENST00000519363 TRIM34Q9BYJ4 488 aa17.46■□□□□ 0.39
PABPC1-210ENST00000519363 PGAP2Q9UHJ9 254 aa17.46■□□□□ 0.39
PABPC1-210ENST00000519363 CCDC196A0A1B0GTZ2 297 aa17.45■□□□□ 0.38
PABPC1-210ENST00000519363 CPLX1O14810 134 aa17.45■□□□□ 0.38
PABPC1-210ENST00000519363 TBC1D12O60347 775 aa17.45■□□□□ 0.38
PABPC1-210ENST00000519363 TROAPQ12815 778 aa17.45■□□□□ 0.38
PABPC1-210ENST00000519363 RTN1Q16799 776 aa17.45■□□□□ 0.38
PABPC1-210ENST00000519363 L3MBTL3Q96JM7 780 aaPredicted RBP17.45■□□□□ 0.38
PABPC1-210ENST00000519363 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.45■□□□□ 0.38
PABPC1-210ENST00000519363 STK36Q9NRP7 1315 aa17.45■□□□□ 0.38
PABPC1-210ENST00000519363 ATAD5Q96QE3 1844 aa17.44■□□□□ 0.38
PABPC1-210ENST00000519363 JAK2O60674 1132 aa17.44■□□□□ 0.38
PABPC1-210ENST00000519363 BRD1O95696 1058 aa17.44■□□□□ 0.38
PABPC1-210ENST00000519363 AKR1B1P15121 316 aa17.44■□□□□ 0.38
PABPC1-210ENST00000519363 MAP3K10Q02779 954 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms