RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SHDQ96IW2 340 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 TM9SF2Q99805 663 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 FAM83CQ9BQN1 747 aa7.03□□□□□ -1.28
SQLE-202ENST00000518604 LRIG2O94898 1065 aa7.02□□□□□ -1.29
SQLE-202ENST00000518604 CST3P01034 146 aaPredicted RBP7.02□□□□□ -1.29
SQLE-202ENST00000518604 NFICP08651 508 aa7.02□□□□□ -1.29
SQLE-202ENST00000518604 RBL2Q08999 1139 aa7.02□□□□□ -1.29
SQLE-202ENST00000518604 SLBPQ14493 270 aaKnown RBP eCLIP7.02□□□□□ -1.29
SQLE-202ENST00000518604 BEND4Q6ZU67 534 aa7.02□□□□□ -1.29
SQLE-202ENST00000518604 MFSD2AQ8NA29 543 aa7.02□□□□□ -1.29
SQLE-202ENST00000518604 GIMAP7Q8NHV1 300 aa7.02□□□□□ -1.29
SQLE-202ENST00000518604 TP53INP1Q96A56 240 aa7.02□□□□□ -1.29
SQLE-202ENST00000518604 HIRIP3Q9BW71 556 aaPredicted RBP7.02□□□□□ -1.29
SQLE-202ENST00000518604 FOXQ1Q9C009 403 aa7.02□□□□□ -1.29
SQLE-202ENST00000518604 KCNF1Q9H3M0 494 aa7.02□□□□□ -1.29
SQLE-202ENST00000518604 CNNM2Q9H8M5 875 aa7.02□□□□□ -1.29
SQLE-202ENST00000518604 FBRSQ9HAH7 460 aa7.02□□□□□ -1.29
SQLE-202ENST00000518604 DAGLAQ9Y4D2 1042 aa7.02□□□□□ -1.29
SQLE-202ENST00000518604 STK10O94804 968 aaKnown RBP7.01□□□□□ -1.29
SQLE-202ENST00000518604 CCNFP41002 786 aa7.01□□□□□ -1.29
SQLE-202ENST00000518604 TNNI3KQ59H18 835 aa7.01□□□□□ -1.29
SQLE-202ENST00000518604 SEZ6L2Q6UXD5 910 aa7.01□□□□□ -1.29
SQLE-202ENST00000518604 C19orf47Q8N9M1 422 aaKnown RBP7.01□□□□□ -1.29
SQLE-202ENST00000518604 FAM13CQ8NE31 585 aa7.01□□□□□ -1.29
SQLE-202ENST00000518604 ATG4CQ96DT6 458 aa7.01□□□□□ -1.29
SQLE-202ENST00000518604 STOML1Q9UBI4 398 aa7.01□□□□□ -1.29
SQLE-202ENST00000518604 RAXQ9Y2V3 346 aa7.01□□□□□ -1.29
SQLE-202ENST00000518604 CHURC1-FNTBB4DL54 471 aa7□□□□□ -1.29
SQLE-202ENST00000518604 ITGB2P05107 769 aa7□□□□□ -1.29
SQLE-202ENST00000518604 H2AFB1P0C5Y9 115 aa7□□□□□ -1.29
SQLE-202ENST00000518604 H2AFB2P0C5Z0 115 aa7□□□□□ -1.29
SQLE-202ENST00000518604 GTF2F1P35269 517 aaKnown RBP eCLIP7□□□□□ -1.29
SQLE-202ENST00000518604 NFKBIBQ15653 356 aa7□□□□□ -1.29
SQLE-202ENST00000518604 NKG7Q16617 165 aa7□□□□□ -1.29
SQLE-202ENST00000518604 CCDC81Q6ZN84 652 aa7□□□□□ -1.29
SQLE-202ENST00000518604 PRR23CQ6ZRP0 262 aa7□□□□□ -1.29
SQLE-202ENST00000518604 ARMCX6Q7L4S7 300 aa7□□□□□ -1.29
SQLE-202ENST00000518604 NLRC3Q7RTR2 1065 aa7□□□□□ -1.29
SQLE-202ENST00000518604 ANAPC16Q96DE5 110 aa7□□□□□ -1.29
SQLE-202ENST00000518604 PSMG3-AS1Q96PY0 264 aa7□□□□□ -1.29
SQLE-202ENST00000518604 USP35Q9P2H5 1018 aa7□□□□□ -1.29
SQLE-202ENST00000518604 PRKAG3Q9UGI9 489 aa7□□□□□ -1.29
SQLE-202ENST00000518604 TNFRSF10CO14798 259 aa6.99□□□□□ -1.29
SQLE-202ENST00000518604 NME1P15531 152 aaKnown RBP6.99□□□□□ -1.29
SQLE-202ENST00000518604 CASP7P55210 303 aa6.99□□□□□ -1.29
SQLE-202ENST00000518604 NBPF6Q5VWK0 638 aa6.99□□□□□ -1.29
SQLE-202ENST00000518604 PRAMEF13Q5VWM6 474 aa6.99□□□□□ -1.29
SQLE-202ENST00000518604 OVOS1Q6IE37 1185 aa6.99□□□□□ -1.29
SQLE-202ENST00000518604 GPAT2Q6NUI2 795 aa6.99□□□□□ -1.29
SQLE-202ENST00000518604 SLC51AQ86UW1 340 aa6.99□□□□□ -1.29
SQLE-202ENST00000518604 LSRQ86X29 649 aaPredicted RBP6.99□□□□□ -1.29
SQLE-202ENST00000518604 CYB5D2Q8WUJ1 264 aa6.99□□□□□ -1.29
SQLE-202ENST00000518604 CCDC74BQ96LY2 380 aa6.99□□□□□ -1.29
SQLE-202ENST00000518604 NBPF4Q96M43 638 aa6.99□□□□□ -1.29
SQLE-202ENST00000518604 ZNF408Q9H9D4 720 aa6.99□□□□□ -1.29
SQLE-202ENST00000518604 PPP1R1BQ9UD71 204 aaPredicted RBP6.99□□□□□ -1.29
SQLE-202ENST00000518604 KLHL3Q9UH77 587 aa6.99□□□□□ -1.29
SQLE-202ENST00000518604 SLC12A7Q9Y666 1083 aa6.99□□□□□ -1.29
SQLE-202ENST00000518604 UPK3BL1B0FP48 263 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 UPK3BL2E5RIL1 263 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 RGS13O14921 159 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 DNAJA2O60884 412 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 IGHA1P01876 353 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 RAG1P15918 1043 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 GUCY2CP25092 1073 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 ETFBP38117 255 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 ARSHQ5FYA8 562 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 UBE3DQ7Z6J8 389 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 CKAP2LQ8IYA6 745 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 ANTXR1Q9H6X2 564 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 C7orf69Q9H7B7 122 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 TPSG1Q9NRR2 321 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 C1GALT1Q9NS00 363 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 MRVI1Q9Y6F6 885 aa6.98□□□□□ -1.29
SQLE-202ENST00000518604 GSC2O15499 205 aa6.97□□□□□ -1.29
SQLE-202ENST00000518604 PHACTR4Q8IZ21 702 aa6.97□□□□□ -1.29
SQLE-202ENST00000518604 DHX38Q92620 1227 aaKnown RBP6.97□□□□□ -1.29
SQLE-202ENST00000518604 PRDM10Q9NQV6 1147 aa6.97□□□□□ -1.29
SQLE-202ENST00000518604 R3HCC1Q9Y3T6 440 aaKnown RBP6.97□□□□□ -1.29
SQLE-202ENST00000518604 MSTNO14793 375 aa6.96□□□□□ -1.3
SQLE-202ENST00000518604 DYNC1LI2O43237 492 aaPredicted RBP6.96□□□□□ -1.3
SQLE-202ENST00000518604 CYP27A1Q02318 531 aa6.96□□□□□ -1.3
SQLE-202ENST00000518604 RNF43Q68DV7 783 aa6.96□□□□□ -1.3
SQLE-202ENST00000518604 ZNF746Q6NUN9 644 aaPredicted RBP6.96□□□□□ -1.3
SQLE-202ENST00000518604 DHRS1Q96LJ7 313 aa6.96□□□□□ -1.3
SQLE-202ENST00000518604 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.3
SQLE-202ENST00000518604 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.96□□□□□ -1.3
SQLE-202ENST00000518604 CEP131Q9UPN4 1083 aa6.96□□□□□ -1.3
SQLE-202ENST00000518604 HMX2A2RU54 273 aa6.95□□□□□ -1.3
SQLE-202ENST00000518604 SMAD7O15105 426 aaKnown RBP6.95□□□□□ -1.3
SQLE-202ENST00000518604 GBP1P32455 592 aa6.95□□□□□ -1.3
SQLE-202ENST00000518604 LETMD1Q6P1Q0 360 aa6.95□□□□□ -1.3
SQLE-202ENST00000518604 OGFOD3Q6PK18 319 aa6.95□□□□□ -1.3
SQLE-202ENST00000518604 ANKS3Q6ZW76 656 aa6.95□□□□□ -1.3
SQLE-202ENST00000518604 ZAR1Q86SH2 424 aa6.95□□□□□ -1.3
SQLE-202ENST00000518604 FAM169BQ8N8A8 192 aa6.95□□□□□ -1.3
SQLE-202ENST00000518604 COX4I2Q96KJ9 171 aa6.95□□□□□ -1.3
SQLE-202ENST00000518604 SLC9A7Q96T83 725 aa6.95□□□□□ -1.3
SQLE-202ENST00000518604 SPOCK3Q9BQ16 436 aa6.95□□□□□ -1.3
SQLE-202ENST00000518604 LGR6Q9HBX8 967 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms