RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 POLIQ9UNA4 740 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 DHX29Q7Z478 1369 aaKnown RBP5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 YEATS2Q9ULM3 1422 aa5.64□□□□□ -1.51
HMGB1P19-201ENST00000517578 H3BRB1 525 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 IPO8O15397 1037 aaKnown RBP5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 COBLO75128 1261 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 CPP00450 1065 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 PDGFAP04085 211 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 ACPPP15309 386 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 DDIT3P35638 169 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 MAGEA8P43361 318 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 ICA1Q05084 483 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 ADCY2Q08462 1091 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 SF3B2Q13435 895 aaKnown RBP5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 RBBP5Q15291 538 aaKnown RBP5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 DUOXA2Q1HG44 320 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 ZC3H12AQ5D1E8 599 aaKnown RBP5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 WWC2Q6AWC2 1192 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 PDE12Q6L8Q7 609 aaKnown RBP5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 ZNF438Q7Z4V0 828 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 SRLQ86TD4 932 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 NCAPG2Q86XI2 1143 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 TRIM42Q8IWZ5 723 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 EFCAB13Q8IY85 973 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 TCP11Q8WWU5 503 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 KLHDC7BQ96G42 594 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 MYRFLQ96LU7 910 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 GGNBP2Q9H3C7 697 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 TUT1Q9H6E5 874 aaKnown RBP5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 ELP3Q9H9T3 547 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 CNTN3Q9P232 1028 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 CPSF2Q9P2I0 782 aaKnown RBP5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 SALL4Q9UJQ4 1053 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 ANKRD30AQ9BXX3 1397 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 MIA2Q96PC5 1412 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 NCOA3Q9Y6Q9 1424 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 CTTNBP2Q8WZ74 1663 aa5.63□□□□□ -1.51
HMGB1P19-201ENST00000517578 HMX2A2RU54 273 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 PRR19A6NJB7 356 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 NFKBIEO00221 500 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 ADAMTS4O75173 837 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 ZRANB2O95218 330 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 PTPRAP18433 802 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 MZF1P28698 734 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 PRPHP41219 470 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 CD151P48509 253 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 FAM50AQ14320 339 aaKnown RBP5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 DHX8Q14562 1220 aaKnown RBP5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 CRYMQ14894 314 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 ZSCAN23Q3MJ62 389 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 CCDC184Q52MB2 194 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 KRBA2Q6ZNG9 492 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 EP400NLQ6ZTU2 488 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 KIAA1328Q86T90 577 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 GLYCTKQ8IVS8 523 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 CCDC191Q8NCU4 936 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 EXOC4Q96A65 974 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 C22orf23Q9BZE7 217 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 TSPY26PQ9H489 355 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 GOLGA2P5Q9HBQ8 144 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 SEC31BQ9NQW1 1179 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 SPATS2LQ9NUQ6 558 aaKnown RBP5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 CCDC87Q9NVE4 849 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 CHCHD3Q9NX63 227 aaKnown RBP5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 ETAA1Q9NY74 926 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 RRP15Q9Y3B9 282 aaKnown RBP5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 OAS3Q9Y6K5 1087 aaKnown RBP5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 MTUS2Q5JR59 1369 aa5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 POLA1P09884 1462 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P19-201ENST00000517578 A0A087WUV0 522 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 A0A1B0GUA9 196 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 H3BRJ5 948 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 ICMTO60725 284 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 PPFIA2O75334 1257 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 RPLP1P05386 114 aaKnown RBP5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 NPR3P17342 541 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 SPINK2P20155 84 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 EIF5P55010 431 aaKnown RBP5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 GP2P55259 537 aaKnown RBP5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 NCBP1Q09161 790 aaKnown RBP5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 TMED1Q13445 227 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 MYBPC2Q14324 1141 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 NEDD9Q14511 834 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 PPP2R5AQ15172 486 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 FILIP1LQ4L180 1135 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 RNF43Q68DV7 783 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 FAM117BQ6P1L5 589 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 ARMCX6Q7L4S7 300 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 ANKRD18AQ8IVF6 992 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 RPUSD2Q8IZ73 545 aaKnown RBP5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 SDR16C5Q8N3Y7 309 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 C1orf127Q8N9H9 656 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 ERO1AQ96HE7 468 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 DBNDD2Q9BQY9 259 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 UBA5Q9GZZ9 404 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 VEZTQ9HBM0 779 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms