RNA–Protein interactions for RNA: ENST00000515483.5

TNPO1-210, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-210ENST00000515483 RHBDL3P58872 404 aa18.44■□□□□ 0.54
TNPO1-210ENST00000515483 MAP2K5Q13163 448 aa18.44■□□□□ 0.54
TNPO1-210ENST00000515483 C9orf50Q5SZB4 431 aa18.44■□□□□ 0.54
TNPO1-210ENST00000515483 EDC3Q96F86 508 aaKnown RBP18.44■□□□□ 0.54
TNPO1-210ENST00000515483 PORCNQ9H237 461 aa18.44■□□□□ 0.54
TNPO1-210ENST00000515483 HERC5Q9UII4 1024 aaKnown RBP18.44■□□□□ 0.54
TNPO1-210ENST00000515483 ATP11BQ9Y2G3 1177 aa18.44■□□□□ 0.54
TNPO1-210ENST00000515483 PDS5AQ29RF7 1337 aaKnown RBP18.44■□□□□ 0.54
TNPO1-210ENST00000515483 MYH2Q9UKX2 1941 aa18.43■□□□□ 0.54
TNPO1-210ENST00000515483 ASNSP08243 561 aa18.43■□□□□ 0.54
TNPO1-210ENST00000515483 Q3C1V9 767 aa18.43■□□□□ 0.54
TNPO1-210ENST00000515483 CCDC102BQ68D86 513 aa18.43■□□□□ 0.54
TNPO1-210ENST00000515483 PAGR1Q9BTK6 254 aa18.43■□□□□ 0.54
TNPO1-210ENST00000515483 USP44Q9H0E7 712 aa18.43■□□□□ 0.54
TNPO1-210ENST00000515483 MUC3AQ02505 3323 aa18.42■□□□□ 0.54
TNPO1-210ENST00000515483 CNGA1P29973 690 aa18.42■□□□□ 0.54
TNPO1-210ENST00000515483 RRP1BQ14684 758 aaKnown RBP18.42■□□□□ 0.54
TNPO1-210ENST00000515483 ERICH6Q7L0X2 663 aa18.42■□□□□ 0.54
TNPO1-210ENST00000515483 PRDM5Q9NQX1 630 aaPredicted RBP18.42■□□□□ 0.54
TNPO1-210ENST00000515483 SALL2Q9Y467 1007 aaPredicted RBP18.42■□□□□ 0.54
TNPO1-210ENST00000515483 USP17L10C9JJH3 530 aa18.41■□□□□ 0.54
TNPO1-210ENST00000515483 LDHCP07864 332 aa18.41■□□□□ 0.54
TNPO1-210ENST00000515483 PLA2G5P39877 138 aa18.41■□□□□ 0.54
TNPO1-210ENST00000515483 CCNA1P78396 465 aa18.41■□□□□ 0.54
TNPO1-210ENST00000515483 MECOMQ03112 1051 aa18.41■□□□□ 0.54
TNPO1-210ENST00000515483 RASGRF1Q13972 1273 aa18.41■□□□□ 0.54
TNPO1-210ENST00000515483 ARRDC4Q8NCT1 418 aa18.41■□□□□ 0.54
TNPO1-210ENST00000515483 BADQ92934 168 aa18.41■□□□□ 0.54
TNPO1-210ENST00000515483 SIL1Q9H173 461 aa18.41■□□□□ 0.54
TNPO1-210ENST00000515483 IL15P40933 162 aaPredicted RBP18.4■□□□□ 0.54
TNPO1-210ENST00000515483 GSTO1P78417 241 aa18.4■□□□□ 0.54
TNPO1-210ENST00000515483 ATP2B2Q01814 1243 aa18.4■□□□□ 0.54
TNPO1-210ENST00000515483 SLC39A5Q6ZMH5 540 aa18.4■□□□□ 0.54
TNPO1-210ENST00000515483 FAM122AQ96E09 287 aa18.4■□□□□ 0.54
TNPO1-210ENST00000515483 GINM1Q9NU53 330 aa18.4■□□□□ 0.54
TNPO1-210ENST00000515483 PI4KBQ9UBF8 816 aa18.4■□□□□ 0.54
TNPO1-210ENST00000515483 CDH23Q9H251 3354 aa18.4■□□□□ 0.54
TNPO1-210ENST00000515483 MAST2Q6P0Q8 1798 aa18.4■□□□□ 0.54
TNPO1-210ENST00000515483 SLC15A5A6NIM6 579 aa18.39■□□□□ 0.53
TNPO1-210ENST00000515483 KBTBD13C9JR72 458 aa18.39■□□□□ 0.53
TNPO1-210ENST00000515483 RABGAP1Q9Y3P9 1069 aa18.39■□□□□ 0.53
TNPO1-210ENST00000515483 ADORA1P30542 326 aa18.38■□□□□ 0.53
TNPO1-210ENST00000515483 DHX36Q9H2U1 1008 aaKnown RBP18.38■□□□□ 0.53
TNPO1-210ENST00000515483 FLRT1Q9NZU1 646 aa18.38■□□□□ 0.53
TNPO1-210ENST00000515483 RAPGEFL1Q9UHV5 662 aa18.38■□□□□ 0.53
TNPO1-210ENST00000515483 IVNS1ABPQ9Y6Y0 642 aa18.38■□□□□ 0.53
TNPO1-210ENST00000515483 PTPRCP08575 1304 aa18.38■□□□□ 0.53
TNPO1-210ENST00000515483 HOXC6P09630 235 aa18.37■□□□□ 0.53
TNPO1-210ENST00000515483 GJC2Q5T442 439 aaPredicted RBP18.37■□□□□ 0.53
TNPO1-210ENST00000515483 WDR78Q5VTH9 848 aa18.37■□□□□ 0.53
TNPO1-210ENST00000515483 TEX11Q8IYF3 940 aa18.37■□□□□ 0.53
TNPO1-210ENST00000515483 RNPC3Q96LT9 517 aaKnown RBP18.37■□□□□ 0.53
TNPO1-210ENST00000515483 PTPREP23469 700 aa18.36■□□□□ 0.53
TNPO1-210ENST00000515483 SNX17Q15036 470 aa18.36■□□□□ 0.53
TNPO1-210ENST00000515483 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
TNPO1-210ENST00000515483 USP38Q8NB14 1042 aa18.36■□□□□ 0.53
TNPO1-210ENST00000515483 ZNF384Q8TF68 577 aa18.36■□□□□ 0.53
TNPO1-210ENST00000515483 ATXN2LQ8WWM7 1075 aaKnown RBP18.36■□□□□ 0.53
TNPO1-210ENST00000515483 TRIM34Q9BYJ4 488 aa18.36■□□□□ 0.53
TNPO1-210ENST00000515483 PDLIM7Q9NR12 457 aa18.36■□□□□ 0.53
TNPO1-210ENST00000515483 LTBP2Q14767 1821 aa18.35■□□□□ 0.53
TNPO1-210ENST00000515483 CYP2C19P33261 490 aa18.35■□□□□ 0.53
TNPO1-210ENST00000515483 TIMM10P62072 90 aa18.35■□□□□ 0.53
TNPO1-210ENST00000515483 GRIN2CQ14957 1233 aa18.35■□□□□ 0.53
TNPO1-210ENST00000515483 TRIM60Q495X7 471 aa18.35■□□□□ 0.53
TNPO1-210ENST00000515483 CCDC184Q52MB2 194 aa18.35■□□□□ 0.53
TNPO1-210ENST00000515483 POTEEQ6S8J3 1075 aa18.35■□□□□ 0.53
TNPO1-210ENST00000515483 FOXP4Q8IVH2 680 aaPredicted RBP18.35■□□□□ 0.53
TNPO1-210ENST00000515483 NOL10Q9BSC4 688 aaKnown RBP18.35■□□□□ 0.53
TNPO1-210ENST00000515483 EMILIN3Q9NT22 766 aa18.35■□□□□ 0.53
TNPO1-210ENST00000515483 NDUFB9Q9Y6M9 179 aa18.35■□□□□ 0.53
TNPO1-210ENST00000515483 TRIM43BA6NCK2 446 aa18.34■□□□□ 0.53
TNPO1-210ENST00000515483 MVPQ14764 893 aaKnown RBP18.34■□□□□ 0.53
TNPO1-210ENST00000515483 C1orf53Q5VUE5 145 aa18.34■□□□□ 0.53
TNPO1-210ENST00000515483 CRACR2BQ8N4Y2 399 aaPredicted RBP18.34■□□□□ 0.53
TNPO1-210ENST00000515483 MRPL50Q8N5N7 158 aaKnown RBP18.34■□□□□ 0.53
TNPO1-210ENST00000515483 TRIM43Q96BQ3 446 aaPredicted RBP18.34■□□□□ 0.53
TNPO1-210ENST00000515483 NSUN4Q96CB9 384 aaKnown RBP18.34■□□□□ 0.53
TNPO1-210ENST00000515483 TACC3Q9Y6A5 838 aa18.34■□□□□ 0.53
TNPO1-210ENST00000515483 ATAD5Q96QE3 1844 aa18.33■□□□□ 0.53
TNPO1-210ENST00000515483 USP17L15C9J2P7 530 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 USP17L13C9JLJ4 530 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 USP17L11C9JVI0 530 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 USP17L18D6R9N7 530 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 USP17L22D6RA61 530 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 USP17L17D6RBQ6 530 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 USP17L19D6RCP7 530 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 USP17L20D6RJB6 530 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 CYBAP13498 195 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 JAG1P78504 1218 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 USP17L24Q0WX57 530 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 GRB14Q14449 540 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 SH3RF1Q7Z6J0 888 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 METTL16Q86W50 562 aaKnown RBP18.33■□□□□ 0.52
TNPO1-210ENST00000515483 TRPV1Q8NER1 839 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 RAI14Q9P0K7 980 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 ZBTB21Q9ULJ3 1066 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 AKAP2Q9Y2D5 859 aa18.33■□□□□ 0.52
TNPO1-210ENST00000515483 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.32■□□□□ 0.52
TNPO1-210ENST00000515483 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms