RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 SEC23AQ15436 765 aa23.13■■□□□ 1.29
SSBP2-218ENST00000514493 KIF4BQ2VIQ3 1234 aa23.13■■□□□ 1.29
SSBP2-218ENST00000514493 FAM47AQ5JRC9 791 aa23.13■■□□□ 1.29
SSBP2-218ENST00000514493 VEZTQ9HBM0 779 aa23.13■■□□□ 1.29
SSBP2-218ENST00000514493 PLIN4Q96Q06 1357 aa23.13■■□□□ 1.29
SSBP2-218ENST00000514493 GOLGA8BA8MQT2 603 aa23.12■■□□□ 1.29
SSBP2-218ENST00000514493 PDIA3P30101 505 aaKnown RBP23.12■■□□□ 1.29
SSBP2-218ENST00000514493 ZSCAN29Q8IWY8 852 aaPredicted RBP23.12■■□□□ 1.29
SSBP2-218ENST00000514493 FAM151AQ8WW52 585 aa23.12■■□□□ 1.29
SSBP2-218ENST00000514493 SENP2Q9HC62 589 aa23.12■■□□□ 1.29
SSBP2-218ENST00000514493 PI4KBQ9UBF8 816 aa23.12■■□□□ 1.29
SSBP2-218ENST00000514493 ZC3H4Q9UPT8 1303 aaKnown RBP23.12■■□□□ 1.29
SSBP2-218ENST00000514493 H7C1D1 291 aa23.12■■□□□ 1.29
SSBP2-218ENST00000514493 TBC1D10BQ4KMP7 808 aaPredicted RBP23.12■■□□□ 1.29
SSBP2-218ENST00000514493 APOA5Q6Q788 366 aa23.12■■□□□ 1.29
SSBP2-218ENST00000514493 SAMD7Q7Z3H4 446 aa23.12■■□□□ 1.29
SSBP2-218ENST00000514493 FAM83AQ86UY5 434 aa23.12■■□□□ 1.29
SSBP2-218ENST00000514493 ZNF444Q8N0Y2 327 aaPredicted RBP23.12■■□□□ 1.29
SSBP2-218ENST00000514493 ENAHQ8N8S7 591 aaPredicted RBP23.12■■□□□ 1.29
SSBP2-218ENST00000514493 ANP32EQ9BTT0 268 aa23.12■■□□□ 1.29
SSBP2-218ENST00000514493 TFAP4Q01664 338 aa23.11■■□□□ 1.29
SSBP2-218ENST00000514493 SCRN1Q12765 414 aa23.11■■□□□ 1.29
SSBP2-218ENST00000514493 NBR1Q14596 966 aa23.11■■□□□ 1.29
SSBP2-218ENST00000514493 NFXL1Q6ZNB6 911 aa23.11■■□□□ 1.29
SSBP2-218ENST00000514493 TMTC2Q8N394 836 aa23.11■■□□□ 1.29
SSBP2-218ENST00000514493 NAP1L2Q9ULW6 460 aaPredicted RBP23.11■■□□□ 1.29
SSBP2-218ENST00000514493 SMC3Q9UQE7 1217 aa23.11■■□□□ 1.29
SSBP2-218ENST00000514493 TSPY3P0CV98 308 aa23.1■■□□□ 1.29
SSBP2-218ENST00000514493 TSPY8P0CW00 308 aa23.1■■□□□ 1.29
SSBP2-218ENST00000514493 RBM26Q5T8P6 1007 aaKnown RBP23.1■■□□□ 1.29
SSBP2-218ENST00000514493 DNAJC18Q9H819 358 aa23.1■■□□□ 1.29
SSBP2-218ENST00000514493 NID2Q14112 1375 aa23.1■■□□□ 1.29
SSBP2-218ENST00000514493 CCDC69A6NI79 296 aa23.09■■□□□ 1.29
SSBP2-218ENST00000514493 DDNO94850 711 aaPredicted RBP23.09■■□□□ 1.29
SSBP2-218ENST00000514493 YY1P25490 414 aa23.09■■□□□ 1.29
SSBP2-218ENST00000514493 SHMT1P34896 483 aa23.09■■□□□ 1.29
SSBP2-218ENST00000514493 METTL16Q86W50 562 aaKnown RBP23.09■■□□□ 1.29
SSBP2-218ENST00000514493 TNPO1Q92973 898 aaKnown RBP23.09■■□□□ 1.29
SSBP2-218ENST00000514493 TCP11L1Q9NUJ3 509 aa23.09■■□□□ 1.29
SSBP2-218ENST00000514493 HPS5Q9UPZ3 1129 aa23.09■■□□□ 1.29
SSBP2-218ENST00000514493 MYH4Q9Y623 1939 aa23.09■■□□□ 1.29
SSBP2-218ENST00000514493 CRACR2BQ8N4Y2 399 aaPredicted RBP23.09■■□□□ 1.29
SSBP2-218ENST00000514493 CSRNP1Q96S65 589 aa23.09■■□□□ 1.29
SSBP2-218ENST00000514493 NMT2O60551 498 aa23.08■■□□□ 1.29
SSBP2-218ENST00000514493 POLR2AP24928 1970 aaKnown RBP23.08■■□□□ 1.29
SSBP2-218ENST00000514493 TNFAIP1Q13829 316 aa23.08■■□□□ 1.29
SSBP2-218ENST00000514493 PKP1Q13835 747 aa23.08■■□□□ 1.29
SSBP2-218ENST00000514493 CCDC178Q5BJE1 867 aa23.08■■□□□ 1.29
SSBP2-218ENST00000514493 IFIT1BQ5T764 474 aaKnown RBP23.08■■□□□ 1.29
SSBP2-218ENST00000514493 NEDD1Q8NHV4 660 aa23.08■■□□□ 1.29
SSBP2-218ENST00000514493 TRPM4Q8TD43 1214 aa23.08■■□□□ 1.29
SSBP2-218ENST00000514493 SLC12A7Q9Y666 1083 aa23.08■■□□□ 1.29
SSBP2-218ENST00000514493 SCN4AP35499 1836 aa23.07■■□□□ 1.28
SSBP2-218ENST00000514493 ZBTB43O43298 467 aa23.07■■□□□ 1.28
SSBP2-218ENST00000514493 TNNI2P48788 182 aa23.07■■□□□ 1.28
SSBP2-218ENST00000514493 RCAN1P53805 252 aa23.07■■□□□ 1.28
SSBP2-218ENST00000514493 CCT2P78371 535 aaKnown RBP23.07■■□□□ 1.28
SSBP2-218ENST00000514493 FOXP4Q8IVH2 680 aaPredicted RBP23.07■■□□□ 1.28
SSBP2-218ENST00000514493 ZNF526Q8TF50 670 aaPredicted RBP23.07■■□□□ 1.28
SSBP2-218ENST00000514493 CHMP4CQ96CF2 233 aa23.07■■□□□ 1.28
SSBP2-218ENST00000514493 TRIM34Q9BYJ4 488 aa23.07■■□□□ 1.28
SSBP2-218ENST00000514493 IL17RBQ9NRM6 502 aa23.07■■□□□ 1.28
SSBP2-218ENST00000514493 EPS15P42566 896 aa23.06■■□□□ 1.28
SSBP2-218ENST00000514493 MICU3Q86XE3 530 aa23.06■■□□□ 1.28
SSBP2-218ENST00000514493 NCOA5Q9HCD5 579 aaKnown RBP23.06■■□□□ 1.28
SSBP2-218ENST00000514493 MYH6P13533 1939 aa23.06■■□□□ 1.28
SSBP2-218ENST00000514493 GJB2P29033 226 aa23.06■■□□□ 1.28
SSBP2-218ENST00000514493 LMOD1P29536 600 aaPredicted RBP23.06■■□□□ 1.28
SSBP2-218ENST00000514493 METAP2P50579 478 aaKnown RBP eCLIP23.06■■□□□ 1.28
SSBP2-218ENST00000514493 RCSD1Q6JBY9 416 aa23.06■■□□□ 1.28
SSBP2-218ENST00000514493 DGKHQ86XP1 1220 aa23.06■■□□□ 1.28
SSBP2-218ENST00000514493 RAB11FIP4Q86YS3 637 aa23.06■■□□□ 1.28
SSBP2-218ENST00000514493 ZNF654Q8IZM8 581 aa23.06■■□□□ 1.28
SSBP2-218ENST00000514493 LLPHQ9BRT6 129 aaKnown RBP23.06■■□□□ 1.28
SSBP2-218ENST00000514493 TMEM39BQ9GZU3 492 aa23.06■■□□□ 1.28
SSBP2-218ENST00000514493 HERC5Q9UII4 1024 aaKnown RBP23.06■■□□□ 1.28
SSBP2-218ENST00000514493 HACL1Q9UJ83 578 aa23.06■■□□□ 1.28
SSBP2-218ENST00000514493 ASTN2O75129 1339 aaPredicted RBP23.05■■□□□ 1.28
SSBP2-218ENST00000514493 SYNE3Q6ZMZ3 975 aa23.05■■□□□ 1.28
SSBP2-218ENST00000514493 ANKS1AQ92625 1134 aa23.05■■□□□ 1.28
SSBP2-218ENST00000514493 ATAD5Q96QE3 1844 aa23.05■■□□□ 1.28
SSBP2-218ENST00000514493 FAM196BA6NMK8 535 aa23.04■■□□□ 1.28
SSBP2-218ENST00000514493 BRD1O95696 1058 aa23.04■■□□□ 1.28
SSBP2-218ENST00000514493 AKR1B1P15121 316 aa23.04■■□□□ 1.28
SSBP2-218ENST00000514493 TATDN1Q6P1N9 297 aa23.04■■□□□ 1.28
SSBP2-218ENST00000514493 L3MBTL3Q96JM7 780 aaPredicted RBP23.04■■□□□ 1.28
SSBP2-218ENST00000514493 GBP4Q96PP9 640 aa23.04■■□□□ 1.28
SSBP2-218ENST00000514493 MYL10Q9BUA6 226 aa23.04■■□□□ 1.28
SSBP2-218ENST00000514493 PGAP2Q9UHJ9 254 aa23.04■■□□□ 1.28
SSBP2-218ENST00000514493 ZDHHC9Q9Y397 364 aa23.04■■□□□ 1.28
SSBP2-218ENST00000514493 GOLGA8AA7E2F4 631 aa23.04■■□□□ 1.28
SSBP2-218ENST00000514493 DHX16O60231 1041 aaKnown RBP23.04■■□□□ 1.28
SSBP2-218ENST00000514493 SLURP2P0DP57 97 aa23.04■■□□□ 1.28
SSBP2-218ENST00000514493 DPY19L2Q6NUT2 758 aa23.04■■□□□ 1.28
SSBP2-218ENST00000514493 NSUN7Q8NE18 718 aaKnown RBP23.04■■□□□ 1.28
SSBP2-218ENST00000514493 CCDC17Q96LX7 622 aa23.04■■□□□ 1.28
SSBP2-218ENST00000514493 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.04■■□□□ 1.28
SSBP2-218ENST00000514493 ADARB2Q9NS39 739 aaKnown RBP23.04■■□□□ 1.28
SSBP2-218ENST00000514493 DDAH1O94760 285 aa23.03■■□□□ 1.28
SSBP2-218ENST00000514493 RXRAP19793 462 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms