RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 TREML2Q5T2D2 321 aa10.57□□□□□ -0.72
HERC4-214ENST00000513996 GADL1Q6ZQY3 521 aa10.57□□□□□ -0.72
HERC4-214ENST00000513996 FASTKD5Q7L8L6 764 aaKnown RBP10.57□□□□□ -0.72
HERC4-214ENST00000513996 CRACR2BQ8N4Y2 399 aaPredicted RBP10.57□□□□□ -0.72
HERC4-214ENST00000513996 ZNF280CQ8ND82 737 aa10.57□□□□□ -0.72
HERC4-214ENST00000513996 SDR42E1Q8WUS8 393 aa10.57□□□□□ -0.72
HERC4-214ENST00000513996 ARMT1Q9H993 441 aa10.57□□□□□ -0.72
HERC4-214ENST00000513996 EFCC1Q9HA90 598 aa10.57□□□□□ -0.72
HERC4-214ENST00000513996 PTPN22Q9Y2R2 807 aa10.57□□□□□ -0.72
HERC4-214ENST00000513996 MBD4O95243 580 aa10.56□□□□□ -0.72
HERC4-214ENST00000513996 HLA-DOAP06340 250 aa10.56□□□□□ -0.72
HERC4-214ENST00000513996 CYP2D6P10635 497 aa10.56□□□□□ -0.72
HERC4-214ENST00000513996 BCRP11274 1271 aa10.56□□□□□ -0.72
HERC4-214ENST00000513996 NUBP1P53384 320 aa10.56□□□□□ -0.72
HERC4-214ENST00000513996 SOX10P56693 466 aa10.56□□□□□ -0.72
HERC4-214ENST00000513996 LACTBP83111 547 aaPredicted RBP10.56□□□□□ -0.72
HERC4-214ENST00000513996 GABPAQ06546 454 aa10.56□□□□□ -0.72
HERC4-214ENST00000513996 TATDN1Q6P1N9 297 aa10.56□□□□□ -0.72
HERC4-214ENST00000513996 CERS3Q8IU89 383 aa10.56□□□□□ -0.72
HERC4-214ENST00000513996 WDR18Q9BV38 432 aa10.56□□□□□ -0.72
HERC4-214ENST00000513996 CRNKL1Q9BZJ0 848 aaKnown RBP10.56□□□□□ -0.72
HERC4-214ENST00000513996 PUS7LQ9H0K6 701 aaKnown RBP10.56□□□□□ -0.72
HERC4-214ENST00000513996 DCP1AQ9NPI6 582 aaPredicted RBP10.56□□□□□ -0.72
HERC4-214ENST00000513996 DOCK1Q14185 1865 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 POLR3DP05423 398 aaPredicted RBP10.55□□□□□ -0.72
HERC4-214ENST00000513996 ASNSP08243 561 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 SHMT1P34896 483 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 HMGCS2P54868 508 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 UBE3CQ15386 1083 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 SH3D19Q5HYK7 790 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 TTC6Q86TZ1 520 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 EXOC6Q8TAG9 804 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 PI4K2BQ8TCG2 481 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 EHD4Q9H223 541 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 SERPINB13Q9UIV8 391 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 ZBTB21Q9ULJ3 1066 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 AGTPBP1Q9UPW5 1226 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 SLC45A1Q9Y2W3 748 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 PTCH2Q9Y6C5 1203 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 FOCADQ5VW36 1801 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 SALL3Q9BXA9 1300 aa10.55□□□□□ -0.72
HERC4-214ENST00000513996 CYP2D7A0A087X1C5 515 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 GH2P01242 217 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 GUCY1A2P33402 732 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 PSMC4P43686 418 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 BACE1P56817 501 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 HDAC1Q13547 482 aaPredicted RBP10.54□□□□□ -0.72
HERC4-214ENST00000513996 MTMR2Q13614 643 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 ANKRD45Q5TZF3 282 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 KBTBD3Q8NAB2 608 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 PROCA1Q8NCQ7 364 aaPredicted RBP10.54□□□□□ -0.72
HERC4-214ENST00000513996 SLC44A5Q8NCS7 719 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 OSBP2Q969R2 916 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 DYNLL2Q96FJ2 89 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 TRIM47Q96LD4 638 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 PARK7Q99497 189 aaKnown RBP10.54□□□□□ -0.72
HERC4-214ENST00000513996 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.54□□□□□ -0.725e-9■■■■■ 27.3
HERC4-214ENST00000513996 MCM9Q9NXL9 1143 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 SUPT16HQ9Y5B9 1047 aaKnown RBP10.54□□□□□ -0.72
HERC4-214ENST00000513996 MYH1P12882 1939 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 ZSWIM8A7E2V4 1837 aa10.54□□□□□ -0.72
HERC4-214ENST00000513996 PTPRFP10586 1907 aa10.53□□□□□ -0.72
HERC4-214ENST00000513996 HTTP42858 3142 aa10.53□□□□□ -0.72
HERC4-214ENST00000513996 IGHDP01880 384 aa10.53□□□□□ -0.72
HERC4-214ENST00000513996 CERKLQ49MI3 558 aaPredicted RBP10.53□□□□□ -0.72
HERC4-214ENST00000513996 POTEEQ6S8J3 1075 aa10.53□□□□□ -0.72
HERC4-214ENST00000513996 ACER1Q8TDN7 264 aa10.53□□□□□ -0.72
HERC4-214ENST00000513996 STRBPQ96SI9 672 aaKnown RBP10.53□□□□□ -0.72
HERC4-214ENST00000513996 TRIM34Q9BYJ4 488 aa10.53□□□□□ -0.72
HERC4-214ENST00000513996 TBC1D2Q9BYX2 928 aa10.53□□□□□ -0.72
HERC4-214ENST00000513996 AS3MTQ9HBK9 375 aa10.53□□□□□ -0.72
HERC4-214ENST00000513996 EMILIN3Q9NT22 766 aa10.53□□□□□ -0.72
HERC4-214ENST00000513996 GINM1Q9NU53 330 aa10.53□□□□□ -0.72
HERC4-214ENST00000513996 USP17L10C9JJH3 530 aa10.52□□□□□ -0.73
HERC4-214ENST00000513996 USP17L12C9JPN9 530 aa10.52□□□□□ -0.73
HERC4-214ENST00000513996 USP17L21D6R901 530 aa10.52□□□□□ -0.73
HERC4-214ENST00000513996 RNF113AO15541 343 aaKnown RBP10.52□□□□□ -0.73
HERC4-214ENST00000513996 PEX10O60683 326 aa10.52□□□□□ -0.73
HERC4-214ENST00000513996 OSBPP22059 807 aa10.52□□□□□ -0.73
HERC4-214ENST00000513996 KIF22Q14807 665 aa10.52□□□□□ -0.73
HERC4-214ENST00000513996 ABCB5Q2M3G0 1257 aa10.52□□□□□ -0.73
HERC4-214ENST00000513996 C12orf60Q5U649 245 aa10.52□□□□□ -0.73
HERC4-214ENST00000513996 ARMC5Q96C12 935 aa10.52□□□□□ -0.73
HERC4-214ENST00000513996 GPATCH3Q96I76 525 aa10.52□□□□□ -0.73
HERC4-214ENST00000513996 P2RX7Q99572 595 aaKnown RBP10.52□□□□□ -0.73
HERC4-214ENST00000513996 ASCC2Q9H1I8 757 aaPredicted RBP10.52□□□□□ -0.73
HERC4-214ENST00000513996 ATP8A2Q9NTI2 1148 aa10.52□□□□□ -0.73
HERC4-214ENST00000513996 SLC4A4Q9Y6R1 1079 aa10.52□□□□□ -0.73
HERC4-214ENST00000513996 TTC41PQ6P2S7 1318 aa10.52□□□□□ -0.73
HERC4-214ENST00000513996 ATAD5Q96QE3 1844 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 POTEFA5A3E0 1075 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 GSG1L2A8MUP6 293 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 C19orf81C9J6K1 198 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 M0R2C6 588 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 GLRX3O76003 335 aaKnown RBP10.51□□□□□ -0.73
HERC4-214ENST00000513996 FMNL1O95466 1100 aaPredicted RBP10.51□□□□□ -0.73
HERC4-214ENST00000513996 MX1P20591 662 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 HOXA7P31268 230 aaPredicted RBP10.51□□□□□ -0.73
HERC4-214ENST00000513996 SEPT2Q15019 361 aa10.51□□□□□ -0.73
HERC4-214ENST00000513996 RAB3GAP1Q15042 981 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms