RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 PHACTR4Q8IZ21 702 aa8.4□□□□□ -1.06
LINC01088-209ENST00000512130 SCARF2Q96GP6 870 aaPredicted RBP8.4□□□□□ -1.06
LINC01088-209ENST00000512130 TMEM87BQ96K49 555 aa8.4□□□□□ -1.06
LINC01088-209ENST00000512130 YIPF2Q9BWQ6 316 aa8.4□□□□□ -1.06
LINC01088-209ENST00000512130 TNKS2Q9H2K2 1166 aa8.4□□□□□ -1.06
LINC01088-209ENST00000512130 CNNM2Q9H8M5 875 aa8.4□□□□□ -1.06
LINC01088-209ENST00000512130 ST7Q9NRC1 585 aa8.4□□□□□ -1.06
LINC01088-209ENST00000512130 MAPK8IP1Q9UQF2 711 aa8.4□□□□□ -1.06
LINC01088-209ENST00000512130 CNTNAP5Q8WYK1 1306 aa8.39□□□□□ -1.07
LINC01088-209ENST00000512130 TIAF1O95411 115 aa8.39□□□□□ -1.07
LINC01088-209ENST00000512130 GLB1P16278 677 aa8.39□□□□□ -1.07
LINC01088-209ENST00000512130 IFRD2Q12894 506 aaPredicted RBP8.39□□□□□ -1.07
LINC01088-209ENST00000512130 ZNF746Q6NUN9 644 aaPredicted RBP8.39□□□□□ -1.07
LINC01088-209ENST00000512130 SHISA2Q6UWI4 295 aa8.39□□□□□ -1.07
LINC01088-209ENST00000512130 MRPL41Q8IXM3 137 aaKnown RBP8.39□□□□□ -1.07
LINC01088-209ENST00000512130 AGGF1Q8N302 714 aaeCLIP8.39□□□□□ -1.07
LINC01088-209ENST00000512130 LENG1Q96BZ8 264 aaPredicted RBP8.39□□□□□ -1.07
LINC01088-209ENST00000512130 CCDC113Q9H0I3 377 aa8.39□□□□□ -1.07
LINC01088-209ENST00000512130 PHAXQ9H814 394 aaKnown RBP8.39□□□□□ -1.07
LINC01088-209ENST00000512130 SNTG2Q9NY99 539 aa8.39□□□□□ -1.07
LINC01088-209ENST00000512130 TJP2Q9UDY2 1190 aa8.39□□□□□ -1.07
LINC01088-209ENST00000512130 CHURC1-FNTBB4DL54 471 aa8.38□□□□□ -1.07
LINC01088-209ENST00000512130 TNFRSF10CO14798 259 aa8.38□□□□□ -1.07
LINC01088-209ENST00000512130 CCNFP41002 786 aa8.38□□□□□ -1.07
LINC01088-209ENST00000512130 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.38□□□□□ -1.07
LINC01088-209ENST00000512130 SLFN12Q8IYM2 578 aa8.38□□□□□ -1.07
LINC01088-209ENST00000512130 SMYD4Q8IYR2 804 aaPredicted RBP8.38□□□□□ -1.07
LINC01088-209ENST00000512130 CELF2-AS1Q8N7Q2 184 aa8.38□□□□□ -1.07
LINC01088-209ENST00000512130 DHRS1Q96LJ7 313 aa8.38□□□□□ -1.07
LINC01088-209ENST00000512130 ADAMTS8Q9UP79 889 aa8.38□□□□□ -1.07
LINC01088-209ENST00000512130 ACTL7BQ9Y614 415 aa8.38□□□□□ -1.07
LINC01088-209ENST00000512130 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.37□□□□□ -1.07
LINC01088-209ENST00000512130 INSM1Q01101 510 aaPredicted RBP8.37□□□□□ -1.07
LINC01088-209ENST00000512130 NCAPHQ15003 741 aa8.37□□□□□ -1.07
LINC01088-209ENST00000512130 UNC5AQ6ZN44 842 aa8.37□□□□□ -1.07
LINC01088-209ENST00000512130 C2CD4AQ8NCU7 369 aaPredicted RBP8.37□□□□□ -1.07
LINC01088-209ENST00000512130 CCDC74BQ96LY2 380 aa8.37□□□□□ -1.07
LINC01088-209ENST00000512130 GSX1Q9H4S2 264 aaPredicted RBP8.37□□□□□ -1.07
LINC01088-209ENST00000512130 PCOLCE2Q9UKZ9 415 aa8.37□□□□□ -1.07
LINC01088-209ENST00000512130 UPK3BL1B0FP48 263 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 UPK3BL2E5RIL1 263 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 PDPK1O15530 556 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 DNAJA2O60884 412 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 ALX3O95076 343 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 NEFMP07197 916 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 GBP1P32455 592 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 CAP2P40123 477 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 BBS9Q3SYG4 887 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 ALYREFQ86V81 257 aaKnown RBP8.36□□□□□ -1.07
LINC01088-209ENST00000512130 FAM178BQ8IXR5 827 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 ISL2Q96A47 359 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 SLC9A7Q96T83 725 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 FAM105AQ9NUU6 356 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 MSRB2Q9Y3D2 182 aa8.36□□□□□ -1.07
LINC01088-209ENST00000512130 CADPSQ9ULU8 1353 aa8.35□□□□□ -1.07
LINC01088-209ENST00000512130 FAM86C2PA6NEL3 165 aa8.35□□□□□ -1.07
LINC01088-209ENST00000512130 CLSTN1O94985 981 aa8.35□□□□□ -1.07
LINC01088-209ENST00000512130 GJB6O95452 261 aa8.35□□□□□ -1.07
LINC01088-209ENST00000512130 CST3P01034 146 aaPredicted RBP8.35□□□□□ -1.07
LINC01088-209ENST00000512130 RAB6AP20340 208 aa8.35□□□□□ -1.07
LINC01088-209ENST00000512130 NTF4P34130 210 aa8.35□□□□□ -1.07
LINC01088-209ENST00000512130 RASA3Q14644 834 aa8.35□□□□□ -1.07
LINC01088-209ENST00000512130 VHLLQ6RSH7 139 aa8.35□□□□□ -1.07
LINC01088-209ENST00000512130 C6orf15Q6UXA7 325 aaPredicted RBP8.35□□□□□ -1.07
LINC01088-209ENST00000512130 FOXQ1Q9C009 403 aa8.35□□□□□ -1.07
LINC01088-209ENST00000512130 FBRSQ9HAH7 460 aa8.35□□□□□ -1.07
LINC01088-209ENST00000512130 RGS13O14921 159 aa8.34□□□□□ -1.07
LINC01088-209ENST00000512130 ACRP10323 421 aa8.34□□□□□ -1.07
LINC01088-209ENST00000512130 PREPP48147 710 aa8.34□□□□□ -1.07
LINC01088-209ENST00000512130 RASGRF1Q13972 1273 aa8.34□□□□□ -1.07
LINC01088-209ENST00000512130 PRAMEF13Q5VWM6 474 aa8.34□□□□□ -1.07
LINC01088-209ENST00000512130 SDE2Q6IQ49 451 aa8.34□□□□□ -1.07
LINC01088-209ENST00000512130 MFSD2AQ8NA29 543 aa8.34□□□□□ -1.07
LINC01088-209ENST00000512130 KIF2CQ99661 725 aa8.34□□□□□ -1.07
LINC01088-209ENST00000512130 DPH2Q9BQC3 489 aaPredicted RBP8.34□□□□□ -1.07
LINC01088-209ENST00000512130 TBX22Q9Y458 520 aa8.34□□□□□ -1.07
LINC01088-209ENST00000512130 FAM221BA6H8Z2 402 aa8.33□□□□□ -1.08
LINC01088-209ENST00000512130 LRIG2O94898 1065 aa8.33□□□□□ -1.08
LINC01088-209ENST00000512130 SLC7A5Q01650 507 aa8.33□□□□□ -1.08
LINC01088-209ENST00000512130 SLBPQ14493 270 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC01088-209ENST00000512130 ZYXQ15942 572 aaKnown RBP8.33□□□□□ -1.08
LINC01088-209ENST00000512130 NKG7Q16617 165 aa8.33□□□□□ -1.08
LINC01088-209ENST00000512130 UVSSAQ2YD98 709 aa8.33□□□□□ -1.08
LINC01088-209ENST00000512130 GNPTABQ3T906 1256 aa8.33□□□□□ -1.08
LINC01088-209ENST00000512130 MTERF2Q49AM1 385 aa8.33□□□□□ -1.08
LINC01088-209ENST00000512130 EEPD1Q7L9B9 569 aa8.33□□□□□ -1.08
LINC01088-209ENST00000512130 CYB5D2Q8WUJ1 264 aa8.33□□□□□ -1.08
LINC01088-209ENST00000512130 WFDC12Q8WWY7 111 aa8.33□□□□□ -1.08
LINC01088-209ENST00000512130 DAGLAQ9Y4D2 1042 aa8.33□□□□□ -1.08
LINC01088-209ENST00000512130 CLEC3AO75596 197 aa8.32□□□□□ -1.08
LINC01088-209ENST00000512130 RXRBP28702 533 aa8.32□□□□□ -1.08
LINC01088-209ENST00000512130 POLR2BP30876 1174 aaKnown RBP8.32□□□□□ -1.08
LINC01088-209ENST00000512130 IREB2P48200 963 aaKnown RBP8.32□□□□□ -1.08
LINC01088-209ENST00000512130 MAP7Q14244 749 aa8.32□□□□□ -1.08
LINC01088-209ENST00000512130 Q6ZS46 218 aa8.32□□□□□ -1.08
LINC01088-209ENST00000512130 ARMCX6Q7L4S7 300 aa8.32□□□□□ -1.08
LINC01088-209ENST00000512130 MICAL1Q8TDZ2 1067 aa8.32□□□□□ -1.08
LINC01088-209ENST00000512130 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.32□□□□□ -1.08
LINC01088-209ENST00000512130 MRPL42Q9Y6G3 142 aaKnown RBP8.32□□□□□ -1.08
LINC01088-209ENST00000512130 LTBP3Q9NS15 1303 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms