RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 USP5P45974 858 aa12.04□□□□□ -0.48
COPS4-211ENST00000511891 SPP2Q13103 211 aa12.04□□□□□ -0.48
COPS4-211ENST00000511891 ARHGEF6Q15052 776 aa12.04□□□□□ -0.48
COPS4-211ENST00000511891 TREML2Q5T2D2 321 aa12.04□□□□□ -0.48
COPS4-211ENST00000511891 CRACR2BQ8N4Y2 399 aaPredicted RBP12.04□□□□□ -0.48
COPS4-211ENST00000511891 ARMC5Q96C12 935 aa12.04□□□□□ -0.48
COPS4-211ENST00000511891 TRIM47Q96LD4 638 aa12.04□□□□□ -0.48
COPS4-211ENST00000511891 HERC5Q9UII4 1024 aaKnown RBP12.04□□□□□ -0.48
COPS4-211ENST00000511891 IGSF3O75054 1194 aa12.03□□□□□ -0.48
COPS4-211ENST00000511891 BCRP11274 1271 aa12.03□□□□□ -0.48
COPS4-211ENST00000511891 PDE6AP16499 860 aa12.03□□□□□ -0.48
COPS4-211ENST00000511891 HMGCS2P54868 508 aa12.03□□□□□ -0.48
COPS4-211ENST00000511891 SLFNL1Q499Z3 407 aa12.03□□□□□ -0.48
COPS4-211ENST00000511891 ZNF280CQ8ND82 737 aa12.03□□□□□ -0.48
COPS4-211ENST00000511891 TRIM34Q9BYJ4 488 aa12.03□□□□□ -0.48
COPS4-211ENST00000511891 BOLA2Q9H3K6 86 aa12.03□□□□□ -0.48
COPS4-211ENST00000511891 FOCADQ5VW36 1801 aa12.02□□□□□ -0.48
COPS4-211ENST00000511891 PTPRFP10586 1907 aa12.02□□□□□ -0.49
COPS4-211ENST00000511891 MAGEB6P1A0A0J9YX57 407 aa12.02□□□□□ -0.49
COPS4-211ENST00000511891 USP17L5A8MUK1 530 aa12.02□□□□□ -0.49
COPS4-211ENST00000511891 FMNL1O95466 1100 aaPredicted RBP12.02□□□□□ -0.49
COPS4-211ENST00000511891 SEC24BO95487 1268 aa12.02□□□□□ -0.49
COPS4-211ENST00000511891 HLA-DOAP06340 250 aa12.02□□□□□ -0.49
COPS4-211ENST00000511891 OSBPP22059 807 aa12.02□□□□□ -0.49
COPS4-211ENST00000511891 TTF1Q15361 905 aaPredicted RBP12.02□□□□□ -0.49
COPS4-211ENST00000511891 SLC9C1Q4G0N8 1177 aa12.02□□□□□ -0.49
COPS4-211ENST00000511891 SLC9C2Q5TAH2 1124 aa12.02□□□□□ -0.49
COPS4-211ENST00000511891 METTL16Q86W50 562 aaKnown RBP12.02□□□□□ -0.49
COPS4-211ENST00000511891 FOXP4Q8IVH2 680 aaPredicted RBP12.02□□□□□ -0.49
COPS4-211ENST00000511891 SH3TC2Q8TF17 1288 aa12.02□□□□□ -0.49
COPS4-211ENST00000511891 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.02□□□□□ -0.49
COPS4-211ENST00000511891 RIOK1Q9BRS2 568 aaKnown RBP12.02□□□□□ -0.49
COPS4-211ENST00000511891 AGTPBP1Q9UPW5 1226 aa12.02□□□□□ -0.49
COPS4-211ENST00000511891 COLQQ9Y215 455 aaPredicted RBP12.02□□□□□ -0.49
COPS4-211ENST00000511891 ZNF532Q9HCE3 1301 aa12.02□□□□□ -0.49
COPS4-211ENST00000511891 ATAD5Q96QE3 1844 aa12.02□□□□□ -0.49
COPS4-211ENST00000511891 HTTP42858 3142 aa12.01□□□□□ -0.49
COPS4-211ENST00000511891 MAP3K13O43283 966 aa12.01□□□□□ -0.49
COPS4-211ENST00000511891 CHGBP05060 677 aa12.01□□□□□ -0.49
COPS4-211ENST00000511891 MTMR2Q13614 643 aa12.01□□□□□ -0.49
COPS4-211ENST00000511891 SMCR8Q8TEV9 937 aaPredicted RBP12.01□□□□□ -0.49
COPS4-211ENST00000511891 ZNF333Q96JL9 665 aa12.01□□□□□ -0.49
COPS4-211ENST00000511891 LRRCC1Q9C099 1032 aa12.01□□□□□ -0.49
COPS4-211ENST00000511891 SRRDQ9UH36 339 aa12.01□□□□□ -0.49
COPS4-211ENST00000511891 SLC45A1Q9Y2W3 748 aa12.01□□□□□ -0.49
COPS4-211ENST00000511891 TCRBV5S4A2TA0A5A2 114 aa12□□□□□ -0.49
COPS4-211ENST00000511891 GNRH1P01148 92 aa12□□□□□ -0.49
COPS4-211ENST00000511891 ASNSP08243 561 aa12□□□□□ -0.49
COPS4-211ENST00000511891 ATP5JP18859 108 aa12□□□□□ -0.49
COPS4-211ENST00000511891 EN2P19622 333 aaPredicted RBP12□□□□□ -0.49
COPS4-211ENST00000511891 TIE1P35590 1138 aa12□□□□□ -0.49
COPS4-211ENST00000511891 CERS3Q8IU89 383 aa12□□□□□ -0.49
COPS4-211ENST00000511891 LCORLQ8N3X6 602 aa12□□□□□ -0.49
COPS4-211ENST00000511891 ANKRD13CQ8N6S4 541 aa12□□□□□ -0.49
COPS4-211ENST00000511891 PROCA1Q8NCQ7 364 aaPredicted RBP12□□□□□ -0.49
COPS4-211ENST00000511891 YTHDC1Q96MU7 727 aaKnown RBP12□□□□□ -0.49
COPS4-211ENST00000511891 HAUS7Q99871 368 aa12□□□□□ -0.49
COPS4-211ENST00000511891 WDR18Q9BV38 432 aa12□□□□□ -0.49
COPS4-211ENST00000511891 AS3MTQ9HBK9 375 aa12□□□□□ -0.49
COPS4-211ENST00000511891 PAG1Q9NWQ8 432 aa12□□□□□ -0.49
COPS4-211ENST00000511891 ZBTB21Q9ULJ3 1066 aa12□□□□□ -0.49
COPS4-211ENST00000511891 MYH1P12882 1939 aa11.99□□□□□ -0.49
COPS4-211ENST00000511891 GH2P01242 217 aa11.99□□□□□ -0.49
COPS4-211ENST00000511891 PLCD1P51178 756 aa11.99□□□□□ -0.49
COPS4-211ENST00000511891 FCGRTP55899 365 aa11.99□□□□□ -0.49
COPS4-211ENST00000511891 PRKCZQ05513 592 aa11.99□□□□□ -0.49
COPS4-211ENST00000511891 SH3D19Q5HYK7 790 aa11.99□□□□□ -0.49
COPS4-211ENST00000511891 TMED8Q6PL24 325 aaPredicted RBP11.99□□□□□ -0.49
COPS4-211ENST00000511891 NBPF11Q86T75 865 aa11.99□□□□□ -0.49
COPS4-211ENST00000511891 SDR42E1Q8WUS8 393 aa11.99□□□□□ -0.49
COPS4-211ENST00000511891 TBC1D2Q9BYX2 928 aa11.99□□□□□ -0.49
COPS4-211ENST00000511891 ASCC2Q9H1I8 757 aaPredicted RBP11.99□□□□□ -0.49
COPS4-211ENST00000511891 ARMT1Q9H993 441 aa11.99□□□□□ -0.49
COPS4-211ENST00000511891 SERPINB13Q9UIV8 391 aa11.99□□□□□ -0.49
COPS4-211ENST00000511891 GABRQQ9UN88 632 aa11.99□□□□□ -0.49
COPS4-211ENST00000511891 MYPNQ86TC9 1320 aa11.99□□□□□ -0.49
COPS4-211ENST00000511891 LOC285556D6RIA3 1793 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 PRKAB2O43741 272 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 PEX10O60683 326 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 POLR3DP05423 398 aaPredicted RBP11.98□□□□□ -0.49
COPS4-211ENST00000511891 CYP2D6P10635 497 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 HOXD10P28358 340 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 ADD2P35612 726 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 PRMT2P55345 433 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 BACE1P56817 501 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 TSHZ3Q63HK5 1081 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 TATDN1Q6P1N9 297 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 TTC6Q86TZ1 520 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 RAET1EQ8TD07 263 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 TMEM106CQ9BVX2 250 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 CRNKL1Q9BZJ0 848 aaKnown RBP11.98□□□□□ -0.49
COPS4-211ENST00000511891 EHD4Q9H223 541 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 DCTPP1Q9H773 170 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 MCM9Q9NXL9 1143 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 PNMA3Q9UL41 463 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 PCDHB15Q9Y5E8 787 aa11.98□□□□□ -0.49
COPS4-211ENST00000511891 KIAA0100Q14667 2235 aaKnown RBP11.97□□□□□ -0.49
COPS4-211ENST00000511891 TNPO2O14787 897 aaKnown RBP11.97□□□□□ -0.49
COPS4-211ENST00000511891 TNRC18O15417 2968 aaPredicted RBP11.97□□□□□ -0.49
COPS4-211ENST00000511891 MBD4O95243 580 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms