RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 NEFLP07196 543 aa19.27■□□□□ 0.68
SIM1-204ENST00000511871 ASNSP08243 561 aa19.27■□□□□ 0.68
SIM1-204ENST00000511871 SHMT1P34896 483 aa19.27■□□□□ 0.68
SIM1-204ENST00000511871 MOGSQ13724 837 aa19.27■□□□□ 0.68
SIM1-204ENST00000511871 SHROOM1Q2M3G4 852 aaPredicted RBP19.27■□□□□ 0.68
SIM1-204ENST00000511871 CTR9Q6PD62 1173 aa19.27■□□□□ 0.68
SIM1-204ENST00000511871 CENPQQ7L2Z9 268 aaPredicted RBP19.27■□□□□ 0.68
SIM1-204ENST00000511871 HELLSQ9NRZ9 838 aa19.27■□□□□ 0.68
SIM1-204ENST00000511871 TAOK2Q9UL54 1235 aa19.27■□□□□ 0.68
SIM1-204ENST00000511871 USP17L5A8MUK1 530 aa19.26■□□□□ 0.67
SIM1-204ENST00000511871 PATL2C9JE40 543 aaKnown RBP19.26■□□□□ 0.67
SIM1-204ENST00000511871 SMIM22K7EJ46 135 aa19.26■□□□□ 0.67
SIM1-204ENST00000511871 TTC22Q5TAA0 569 aa19.26■□□□□ 0.67
SIM1-204ENST00000511871 AMOTL1Q8IY63 956 aa19.26■□□□□ 0.67
SIM1-204ENST00000511871 FAM43AQ8N2R8 423 aa19.26■□□□□ 0.67
SIM1-204ENST00000511871 TBC1D2Q9BYX2 928 aa19.26■□□□□ 0.67
SIM1-204ENST00000511871 EPB41L4AQ9HCS5 686 aaPredicted RBP19.26■□□□□ 0.67
SIM1-204ENST00000511871 ARPP21Q9UBL0 812 aaPredicted RBP19.26■□□□□ 0.67
SIM1-204ENST00000511871 ZBTB21Q9ULJ3 1066 aa19.26■□□□□ 0.67
SIM1-204ENST00000511871 SBK1Q52WX2 424 aa19.25■□□□□ 0.67
SIM1-204ENST00000511871 CCDC129Q6ZRS4 1044 aa19.25■□□□□ 0.67
SIM1-204ENST00000511871 DYNLL2Q96FJ2 89 aa19.25■□□□□ 0.67
SIM1-204ENST00000511871 FAM227BQ96M60 508 aa19.25■□□□□ 0.67
SIM1-204ENST00000511871 R3HDMLQ9H3Y0 253 aa19.25■□□□□ 0.67
SIM1-204ENST00000511871 SWAP70Q9UH65 585 aa19.25■□□□□ 0.67
SIM1-204ENST00000511871 A0A0D9SFI3 127 aa19.25■□□□□ 0.67
SIM1-204ENST00000511871 A0A0G2JLL6 359 aaPredicted RBP19.25■□□□□ 0.67
SIM1-204ENST00000511871 BTBD19C9JJ37 291 aa19.25■□□□□ 0.67
SIM1-204ENST00000511871 GSPT1P15170 499 aaKnown RBP19.25■□□□□ 0.67
SIM1-204ENST00000511871 SDSP20132 328 aa19.25■□□□□ 0.67
SIM1-204ENST00000511871 NMIQ13287 307 aaPredicted RBP19.25■□□□□ 0.67
SIM1-204ENST00000511871 CERKLQ49MI3 558 aaPredicted RBP19.25■□□□□ 0.67
SIM1-204ENST00000511871 COL13A1Q5TAT6 717 aaPredicted RBP19.25■□□□□ 0.67
SIM1-204ENST00000511871 PRRT2Q7Z6L0 340 aaPredicted RBP19.25■□□□□ 0.67
SIM1-204ENST00000511871 IFNL3Q8IZI9 196 aa19.25■□□□□ 0.67
SIM1-204ENST00000511871 ZCCHC17Q9NP64 241 aaKnown RBP19.25■□□□□ 0.67
SIM1-204ENST00000511871 SPP2Q13103 211 aa19.24■□□□□ 0.67
SIM1-204ENST00000511871 MCMDC2Q4G0Z9 681 aa19.24■□□□□ 0.67
SIM1-204ENST00000511871 SLC44A5Q8NCS7 719 aa19.24■□□□□ 0.67
SIM1-204ENST00000511871 ZNF280CQ8ND82 737 aa19.24■□□□□ 0.67
SIM1-204ENST00000511871 WDR18Q9BV38 432 aa19.24■□□□□ 0.67
SIM1-204ENST00000511871 AS3MTQ9HBK9 375 aa19.24■□□□□ 0.67
SIM1-204ENST00000511871 TRIM75PA6NK02 468 aa19.23■□□□□ 0.67
SIM1-204ENST00000511871 FOXP2O15409 715 aa19.23■□□□□ 0.67
SIM1-204ENST00000511871 GH2P01242 217 aa19.23■□□□□ 0.67
SIM1-204ENST00000511871 APPP05067 770 aa19.23■□□□□ 0.67
SIM1-204ENST00000511871 ABCB5Q2M3G0 1257 aa19.23■□□□□ 0.67
SIM1-204ENST00000511871 NOM1Q5C9Z4 860 aaKnown RBP19.23■□□□□ 0.67
SIM1-204ENST00000511871 ANKRD23Q86SG2 305 aa19.23■□□□□ 0.67
SIM1-204ENST00000511871 TDO2P48775 406 aa19.22■□□□□ 0.67
SIM1-204ENST00000511871 CDK8P49336 464 aa19.22■□□□□ 0.67
SIM1-204ENST00000511871 CRHR2Q13324 411 aa19.22■□□□□ 0.67
SIM1-204ENST00000511871 GPAT2Q6NUI2 795 aa19.22■□□□□ 0.67
SIM1-204ENST00000511871 C16orf86Q6ZW13 317 aa19.22■□□□□ 0.67
SIM1-204ENST00000511871 CCDC136Q96JN2 1154 aa19.22■□□□□ 0.67
SIM1-204ENST00000511871 NACAP1Q9BZK3 213 aa19.22■□□□□ 0.67
SIM1-204ENST00000511871 GREB1LQ9C091 1923 aaPredicted RBP19.22■□□□□ 0.67
SIM1-204ENST00000511871 GPR25O00155 361 aa19.22■□□□□ 0.67
SIM1-204ENST00000511871 TAF1CQ15572 869 aaPredicted RBP19.22■□□□□ 0.67
SIM1-204ENST00000511871 FASTKD5Q7L8L6 764 aaKnown RBP19.22■□□□□ 0.67
SIM1-204ENST00000511871 ROBO3Q96MS0 1386 aa19.21■□□□□ 0.67
SIM1-204ENST00000511871 MINDY4BA8MYZ0 360 aa19.21■□□□□ 0.67
SIM1-204ENST00000511871 GUCY1A2P33402 732 aa19.21■□□□□ 0.67
SIM1-204ENST00000511871 SH3D19Q5HYK7 790 aa19.21■□□□□ 0.67
SIM1-204ENST00000511871 VPS53Q5VIR6 699 aa19.21■□□□□ 0.67
SIM1-204ENST00000511871 GADL1Q6ZQY3 521 aa19.21■□□□□ 0.67
SIM1-204ENST00000511871 CABP5Q9NP86 173 aa19.21■□□□□ 0.67
SIM1-204ENST00000511871 HIP1O00291 1037 aa19.2■□□□□ 0.66
SIM1-204ENST00000511871 PDHXO00330 501 aa19.2■□□□□ 0.66
SIM1-204ENST00000511871 ZNF589Q86UQ0 364 aaPredicted RBP19.2■□□□□ 0.66
SIM1-204ENST00000511871 ZNF296Q8WUU4 475 aaPredicted RBP19.2■□□□□ 0.66
SIM1-204ENST00000511871 NAPBQ9H115 298 aa19.2■□□□□ 0.66
SIM1-204ENST00000511871 ZFYVE28Q9HCC9 887 aa19.2■□□□□ 0.66
SIM1-204ENST00000511871 DIAPH3Q9NSV4 1193 aa19.2■□□□□ 0.66
SIM1-204ENST00000511871 CCDC171Q6TFL3 1326 aa19.19■□□□□ 0.66
SIM1-204ENST00000511871 BACE1P56817 501 aa19.19■□□□□ 0.66
SIM1-204ENST00000511871 CCDC17Q96LX7 622 aa19.19■□□□□ 0.66
SIM1-204ENST00000511871 AKR1B1P15121 316 aa19.18■□□□□ 0.66
SIM1-204ENST00000511871 HMGCS2P54868 508 aa19.18■□□□□ 0.66
SIM1-204ENST00000511871 SEPT2Q15019 361 aa19.18■□□□□ 0.66
SIM1-204ENST00000511871 RAB3GAP1Q15042 981 aa19.18■□□□□ 0.66
SIM1-204ENST00000511871 ALX1Q15699 326 aa19.18■□□□□ 0.66
SIM1-204ENST00000511871 PROCA1Q8NCQ7 364 aaPredicted RBP19.18■□□□□ 0.66
SIM1-204ENST00000511871 C19orf81C9J6K1 198 aa19.18■□□□□ 0.66
SIM1-204ENST00000511871 USP17L10C9JJH3 530 aa19.18■□□□□ 0.66
SIM1-204ENST00000511871 MPHOSPH10O00566 681 aaKnown RBP19.18■□□□□ 0.66
SIM1-204ENST00000511871 DGKZQ13574 1117 aa19.18■□□□□ 0.66
SIM1-204ENST00000511871 MTMR2Q13614 643 aa19.18■□□□□ 0.66
SIM1-204ENST00000511871 CWC27Q6UX04 472 aaKnown RBP19.18■□□□□ 0.66
SIM1-204ENST00000511871 SKAP1Q86WV1 359 aa19.18■□□□□ 0.66
SIM1-204ENST00000511871 AGTPBP1Q9UPW5 1226 aa19.18■□□□□ 0.66
SIM1-204ENST00000511871 SLC45A1Q9Y2W3 748 aa19.18■□□□□ 0.66
SIM1-204ENST00000511871 LAMA4Q16363 1823 aa19.17■□□□□ 0.66
SIM1-204ENST00000511871 MYH4Q9Y623 1939 aa19.17■□□□□ 0.66
SIM1-204ENST00000511871 TLR2O60603 784 aa19.17■□□□□ 0.66
SIM1-204ENST00000511871 FKTNO75072 461 aa19.17■□□□□ 0.66
SIM1-204ENST00000511871 HSPD1P10809 573 aaKnown RBP19.17■□□□□ 0.66
SIM1-204ENST00000511871 PPARAQ07869 468 aa19.17■□□□□ 0.66
SIM1-204ENST00000511871 TREML2Q5T2D2 321 aa19.17■□□□□ 0.66
SIM1-204ENST00000511871 TMEM179Q6ZVK1 233 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms