RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 HOXB7P09629 217 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 RGS19P49795 217 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 MLLT1Q03111 559 aaPredicted RBP8.6□□□□□ -1.03
COPS4-209ENST00000511653 NOGQ13253 232 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 DUSP27Q5VZP5 1158 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 CYP2U1Q7Z449 544 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 HPS1Q92902 700 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 RUNDC1Q96C34 613 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 PHAXQ9H814 394 aaKnown RBP8.6□□□□□ -1.03
COPS4-209ENST00000511653 GBA2Q9HCG7 927 aaPredicted RBP8.6□□□□□ -1.03
COPS4-209ENST00000511653 MBIPQ9NS73 344 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 GGA3Q9NZ52 723 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 HRH3Q9Y5N1 445 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 A0A1B0GUL6 1792 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 PAPPA2Q9BXP8 1791 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 TTC24A2A3L6 582 aaPredicted RBP8.59□□□□□ -1.03
COPS4-209ENST00000511653 WDR4P57081 412 aaKnown RBP8.59□□□□□ -1.03
COPS4-209ENST00000511653 DGKZQ13574 1117 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 KIF4BQ2VIQ3 1234 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 B4GALNT3Q6L9W6 998 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 RGMBQ6NW40 437 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 C1orf216Q8TAB5 229 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 JARID2Q92833 1246 aaPredicted RBP8.59□□□□□ -1.03
COPS4-209ENST00000511653 ANO2Q9NQ90 1003 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 HYPKQ9NX55 129 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 ADAMTS8Q9UP79 889 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 ZNF609O15014 1411 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 UFL1O94874 794 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 GNRH1P01148 92 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 ADH1AP07327 375 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 ZNF853P0CG23 659 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 RPS12P25398 132 aaKnown RBP8.59□□□□□ -1.03
COPS4-209ENST00000511653 ARID4AP29374 1257 aaPredicted RBP8.59□□□□□ -1.03
COPS4-209ENST00000511653 RPS8P62241 208 aaKnown RBP8.59□□□□□ -1.03
COPS4-209ENST00000511653 DDX10Q13206 875 aaKnown RBP8.59□□□□□ -1.03
COPS4-209ENST00000511653 TRIM28Q13263 835 aaKnown RBP8.59□□□□□ -1.03
COPS4-209ENST00000511653 Q6ZVU0 165 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 CYP4X1Q8N118 509 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 RGS22Q8NE09 1264 aa8.59□□□□□ -1.03
COPS4-209ENST00000511653 SCG3Q8WXD2 468 aaKnown RBP8.59□□□□□ -1.03
COPS4-209ENST00000511653 KIAA0100Q14667 2235 aaKnown RBP8.58□□□□□ -1.04
COPS4-209ENST00000511653 A0A1W2PRU2 124 aa8.58□□□□□ -1.04
COPS4-209ENST00000511653 WTIPA6NIX2 430 aaPredicted RBP8.58□□□□□ -1.04
COPS4-209ENST00000511653 PATL2C9JE40 543 aaKnown RBP8.58□□□□□ -1.04
COPS4-209ENST00000511653 ELL2O00472 640 aaPredicted RBP8.58□□□□□ -1.04
COPS4-209ENST00000511653 VIL1P09327 827 aaKnown RBP8.58□□□□□ -1.04
COPS4-209ENST00000511653 FOXK2Q01167 660 aa8.58□□□□□ -1.04
COPS4-209ENST00000511653 KIF23Q02241 960 aaPredicted RBP8.58□□□□□ -1.04
COPS4-209ENST00000511653 ZNF211Q13398 564 aaPredicted RBP8.58□□□□□ -1.04
COPS4-209ENST00000511653 MTMR3Q13615 1198 aa8.58□□□□□ -1.04
COPS4-209ENST00000511653 WDR43Q15061 677 aaKnown RBP eCLIP8.58□□□□□ -1.04
COPS4-209ENST00000511653 SND1Q7KZF4 910 aaKnown RBP eCLIP8.58□□□□□ -1.04
COPS4-209ENST00000511653 ZBTB38Q8NAP3 1195 aaPredicted RBP8.58□□□□□ -1.04
COPS4-209ENST00000511653 CDCA5Q96FF9 252 aa8.58□□□□□ -1.04
COPS4-209ENST00000511653 EYA3Q99504 573 aa8.58□□□□□ -1.04
COPS4-209ENST00000511653 MYD88Q99836 296 aa8.58□□□□□ -1.04
COPS4-209ENST00000511653 ZNF395Q9H8N7 513 aaPredicted RBP8.58□□□□□ -1.04
COPS4-209ENST00000511653 MTMR7Q9Y216 660 aa8.58□□□□□ -1.04
COPS4-209ENST00000511653 ZNF157P51786 506 aaPredicted RBP8.57□□□□□ -1.04
COPS4-209ENST00000511653 NAA30Q147X3 362 aaPredicted RBP8.57□□□□□ -1.04
COPS4-209ENST00000511653 DCPSQ96C86 337 aaKnown RBP8.57□□□□□ -1.04
COPS4-209ENST00000511653 XAGE2Q96GT9 111 aa8.57□□□□□ -1.04
COPS4-209ENST00000511653 ZC3H12CQ9C0D7 883 aaKnown RBP8.57□□□□□ -1.04
COPS4-209ENST00000511653 SCAF8Q9UPN6 1271 aaKnown RBP8.57□□□□□ -1.04
COPS4-209ENST00000511653 SOWAHDA6NJG2 315 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 TRPA1O75762 1119 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 ZNF280AP59817 542 aaPredicted RBP8.56□□□□□ -1.04
COPS4-209ENST00000511653 RELBQ01201 579 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 SH3PXD2AQ5TCZ1 1133 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 ANGEL2Q5VTE6 544 aaKnown RBP8.56□□□□□ -1.04
COPS4-209ENST00000511653 C2orf69Q8N8R5 385 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 C8orf58Q8NAV2 365 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 GMLQ99445 158 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 ANKIB1Q9P2G1 1089 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 GGA1Q9UJY5 639 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 ECM29Q5VYK3 1845 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 A6NJY4 79 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 APAF1O14727 1248 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 PCCAP05165 728 aaPredicted RBP8.56□□□□□ -1.04
COPS4-209ENST00000511653 SMTNP53814 917 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 SCARF1Q14162 830 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 MTFR1Q15390 333 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 CCDC152Q4G0S7 254 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 NOM1Q5C9Z4 860 aaKnown RBP8.56□□□□□ -1.04
COPS4-209ENST00000511653 MOB2Q70IA6 237 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 RASAL3Q86YV0 1011 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 SLC9A9Q8IVB4 645 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 CCDC191Q8NCU4 936 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 MXD3Q9BW11 206 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 IFT57Q9NWB7 429 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 RNF186Q9NXI6 227 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 SAGE1Q9NXZ1 904 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 SCHIP1Q9P0W5 487 aaPredicted RBP8.56□□□□□ -1.04
COPS4-209ENST00000511653 IQSEC3Q9UPP2 1182 aaPredicted RBP8.56□□□□□ -1.04
COPS4-209ENST00000511653 DNMT3AQ9Y6K1 912 aaPredicted RBP8.56□□□□□ -1.04
COPS4-209ENST00000511653 XDHP47989 1333 aa8.56□□□□□ -1.04
COPS4-209ENST00000511653 CACNA1FO60840 1977 aa8.55□□□□□ -1.04
COPS4-209ENST00000511653 PDE8AO60658 829 aa8.55□□□□□ -1.04
COPS4-209ENST00000511653 PTGIRP43119 386 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms