RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 GOLGA8HP0CJ92 632 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 TTLL12Q14166 644 aaPredicted RBP9.48□□□□□ -0.89
SMAD1-209ENST00000511125 STAG1Q8WVM7 1258 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 DPF2Q92785 391 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 CHAMP1Q96JM3 812 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 GLIS2Q9BZE0 524 aaPredicted RBP9.48□□□□□ -0.89
SMAD1-209ENST00000511125 RNF41Q9H4P4 317 aaPredicted RBP9.48□□□□□ -0.89
SMAD1-209ENST00000511125 CCDC69A6NI79 296 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 TRAF5O00463 557 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 JAK2O60674 1132 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 RASA1P20936 1047 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 RPS12P25398 132 aaKnown RBP9.48□□□□□ -0.89
SMAD1-209ENST00000511125 ADD1P35611 737 aaKnown RBP9.48□□□□□ -0.89
SMAD1-209ENST00000511125 HDLBPQ00341 1268 aaKnown RBP9.48□□□□□ -0.89
SMAD1-209ENST00000511125 EXOSC10Q01780 885 aaKnown RBP9.48□□□□□ -0.89
SMAD1-209ENST00000511125 DGKZQ13574 1117 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 WTAPQ15007 396 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 KCNB2Q92953 911 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 KRT23Q9C075 422 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 LIMCH1Q9UPQ0 1083 aa9.48□□□□□ -0.89
SMAD1-209ENST00000511125 BAZ2BQ9UIF8 2168 aaKnown RBP9.48□□□□□ -0.89
SMAD1-209ENST00000511125 RPAP1Q9BWH6 1393 aaPredicted RBP9.47□□□□□ -0.89
SMAD1-209ENST00000511125 CERKLQ49MI3 558 aaPredicted RBP9.47□□□□□ -0.89
SMAD1-209ENST00000511125 SPICE1Q8N0Z3 855 aa9.47□□□□□ -0.89
SMAD1-209ENST00000511125 ZKSCAN4Q969J2 545 aaPredicted RBP9.47□□□□□ -0.89
SMAD1-209ENST00000511125 IL17RBQ9NRM6 502 aa9.47□□□□□ -0.89
SMAD1-209ENST00000511125 PI4KBQ9UBF8 816 aa9.47□□□□□ -0.89
SMAD1-209ENST00000511125 CLIP2Q9UDT6 1046 aa9.47□□□□□ -0.89
SMAD1-209ENST00000511125 GH2P01242 217 aa9.47□□□□□ -0.89
SMAD1-209ENST00000511125 ZNF280AP59817 542 aaPredicted RBP9.47□□□□□ -0.89
SMAD1-209ENST00000511125 GUCY1B3Q02153 619 aa9.47□□□□□ -0.89
SMAD1-209ENST00000511125 SEPT2Q15019 361 aa9.47□□□□□ -0.89
SMAD1-209ENST00000511125 IFIT1BQ5T764 474 aaKnown RBP9.47□□□□□ -0.89
SMAD1-209ENST00000511125 KRT26Q7Z3Y9 468 aa9.47□□□□□ -0.89
SMAD1-209ENST00000511125 IQCA1Q86XH1 822 aa9.47□□□□□ -0.89
SMAD1-209ENST00000511125 ENAHQ8N8S7 591 aaPredicted RBP9.47□□□□□ -0.89
SMAD1-209ENST00000511125 CEP95Q96GE4 821 aa9.47□□□□□ -0.89
SMAD1-209ENST00000511125 VAT1LQ9HCJ6 419 aa9.47□□□□□ -0.89
SMAD1-209ENST00000511125 CNTNAP1P78357 1384 aa9.47□□□□□ -0.89
SMAD1-209ENST00000511125 SHMT1P34896 483 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 PKP1Q13835 747 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 PHKBQ93100 1093 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 DCPSQ96C86 337 aaKnown RBP9.46□□□□□ -0.89
SMAD1-209ENST00000511125 ZSCAN10Q96SZ4 725 aaPredicted RBP9.46□□□□□ -0.89
SMAD1-209ENST00000511125 GJB4Q9NTQ9 266 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 POTECB2RU33 542 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 MKRN3Q13064 507 aaKnown RBP9.46□□□□□ -0.89
SMAD1-209ENST00000511125 TSGA10IPQ3SY00 556 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 SBK1Q52WX2 424 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 GIMAP6Q6P9H5 292 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 IGDCC4Q8TDY8 1250 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 FAM151AQ8WW52 585 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 IDI2Q9BXS1 227 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 TM6SF1Q9BZW5 370 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 CNNM2Q9H8M5 875 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 ADARB2Q9NS39 739 aaKnown RBP9.46□□□□□ -0.89
SMAD1-209ENST00000511125 SLC12A7Q9Y666 1083 aa9.46□□□□□ -0.89
SMAD1-209ENST00000511125 INPP5BP32019 993 aa9.46□□□□□ -0.9
SMAD1-209ENST00000511125 SCRN1Q12765 414 aa9.46□□□□□ -0.9
SMAD1-209ENST00000511125 SULF1Q8IWU6 871 aa9.46□□□□□ -0.9
SMAD1-209ENST00000511125 LY9Q9HBG7 655 aa9.46□□□□□ -0.9
SMAD1-209ENST00000511125 ANGEL1Q9UNK9 670 aaKnown RBP9.46□□□□□ -0.9
SMAD1-209ENST00000511125 ARFGEF1Q9Y6D6 1849 aa9.45□□□□□ -0.9
SMAD1-209ENST00000511125 SBF1O95248 1867 aa9.45□□□□□ -0.9
SMAD1-209ENST00000511125 HMGB1P09429 215 aaKnown RBP9.45□□□□□ -0.9
SMAD1-209ENST00000511125 PDIA3P30101 505 aaKnown RBP9.45□□□□□ -0.9
SMAD1-209ENST00000511125 ST3GAL1Q11201 340 aa9.45□□□□□ -0.9
SMAD1-209ENST00000511125 SART3Q15020 963 aaKnown RBP9.45□□□□□ -0.9
SMAD1-209ENST00000511125 OTUD7BQ6GQQ9 843 aa9.45□□□□□ -0.9
SMAD1-209ENST00000511125 C16orf86Q6ZW13 317 aa9.45□□□□□ -0.9
SMAD1-209ENST00000511125 MRIQ9BWK5 157 aa9.45□□□□□ -0.9
SMAD1-209ENST00000511125 FRMPD2Q68DX3 1309 aaPredicted RBP9.45□□□□□ -0.9
SMAD1-209ENST00000511125 SH2B2O14492 632 aaPredicted RBP9.45□□□□□ -0.9
SMAD1-209ENST00000511125 ECM2O94769 699 aaPredicted RBP9.45□□□□□ -0.9
SMAD1-209ENST00000511125 TNNI2P48788 182 aa9.45□□□□□ -0.9
SMAD1-209ENST00000511125 GRM1Q13255 1194 aa9.45□□□□□ -0.9
SMAD1-209ENST00000511125 NUP88Q99567 741 aaPredicted RBP9.45□□□□□ -0.9
SMAD1-209ENST00000511125 TAF1DQ9H5J8 278 aaPredicted RBP9.45□□□□□ -0.9
SMAD1-209ENST00000511125 ANAPC4Q9UJX5 808 aa9.45□□□□□ -0.9
SMAD1-209ENST00000511125 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
SMAD1-209ENST00000511125 POLR2AP24928 1970 aaKnown RBP9.45□□□□□ -0.9
SMAD1-209ENST00000511125 CPLX1O14810 134 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 DHX16O60231 1041 aaKnown RBP9.44□□□□□ -0.9
SMAD1-209ENST00000511125 CDC27P30260 824 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 ECE1P42892 770 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 SNAP25P60880 206 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 SYNE3Q6ZMZ3 975 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 TICAM2Q86XR7 235 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 AIFM3Q96NN9 605 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 GPCPD1Q9NPB8 672 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 GOLGA8AA7E2F4 631 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 ZBTB43O43298 467 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 METAP2P50579 478 aaKnown RBP eCLIP9.44□□□□□ -0.9
SMAD1-209ENST00000511125 ABCB5Q2M3G0 1257 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 USP17L2Q6R6M4 530 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 UBA5Q9GZZ9 404 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 KAT14Q9H8E8 782 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 ENTPD3O75355 529 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 APOA5Q6Q788 366 aa9.44□□□□□ -0.9
SMAD1-209ENST00000511125 ACER1Q8TDN7 264 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms