RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 PRDM1O75626 825 aa10.52□□□□□ -0.73
SEC24D-209ENST00000509818 USP17L8P0C7I0 530 aa10.52□□□□□ -0.73
SEC24D-209ENST00000509818 CYP2D6P10635 497 aa10.52□□□□□ -0.73
SEC24D-209ENST00000509818 NASPP49321 788 aaPredicted RBP10.52□□□□□ -0.73
SEC24D-209ENST00000509818 GTF2IP78347 998 aa10.52□□□□□ -0.73
SEC24D-209ENST00000509818 TGFBRAP1Q8WUH2 860 aa10.52□□□□□ -0.73
SEC24D-209ENST00000509818 NUP133Q8WUM0 1156 aa10.52□□□□□ -0.73
SEC24D-209ENST00000509818 SLC26A6Q9BXS9 759 aa10.52□□□□□ -0.73
SEC24D-209ENST00000509818 RBM28Q9NW13 759 aaKnown RBP10.52□□□□□ -0.73
SEC24D-209ENST00000509818 RTEL1Q9NZ71 1219 aa10.52□□□□□ -0.73
SEC24D-209ENST00000509818 ESPNB1AK53 854 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 DDAH1O94760 285 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 POLR3DP05423 398 aaPredicted RBP10.51□□□□□ -0.73
SEC24D-209ENST00000509818 TERF1P54274 439 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 KIF23Q02241 960 aaPredicted RBP10.51□□□□□ -0.73
SEC24D-209ENST00000509818 KRT40Q6A162 431 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 CRACR2BQ8N4Y2 399 aaPredicted RBP10.51□□□□□ -0.73
SEC24D-209ENST00000509818 CNKSR1Q969H4 720 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 USP28Q96RU2 1077 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 PANK2Q9BZ23 570 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 RBSNQ9H1K0 784 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 PDCL3Q9H2J4 239 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 ZNF287Q9HBT7 754 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 GAKO14976 1311 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 TSPY2A6NKD2 308 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 DEXIO95424 95 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 DPEP1P16444 411 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 KCNA3P22001 575 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 AKAP17AQ02040 695 aaKnown RBP10.51□□□□□ -0.73
SEC24D-209ENST00000509818 CEBPZQ03701 1054 aaKnown RBP10.51□□□□□ -0.73
SEC24D-209ENST00000509818 TEX11Q8IYF3 940 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 BICD2Q8TD16 824 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 PGBD1Q96JS3 809 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 MAP7D2Q96T17 732 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 MKNK2Q9HBH9 465 aa10.51□□□□□ -0.73
SEC24D-209ENST00000509818 DDX19AQ9NUU7 478 aaKnown RBP10.51□□□□□ -0.73
SEC24D-209ENST00000509818 ROBO3Q96MS0 1386 aa10.5□□□□□ -0.73
SEC24D-209ENST00000509818 DLEC1Q9Y238 1755 aa10.5□□□□□ -0.73
SEC24D-209ENST00000509818 COL11A2P13942 1736 aaPredicted RBP10.5□□□□□ -0.73
SEC24D-209ENST00000509818 YEATS4O95619 227 aa10.5□□□□□ -0.73
SEC24D-209ENST00000509818 GNL2Q13823 731 aaKnown RBP10.5□□□□□ -0.73
SEC24D-209ENST00000509818 SAFBQ15424 915 aaKnown RBP eCLIP10.5□□□□□ -0.73
SEC24D-209ENST00000509818 FAM47AQ5JRC9 791 aa10.5□□□□□ -0.73
SEC24D-209ENST00000509818 MYSM1Q5VVJ2 828 aa10.5□□□□□ -0.73
SEC24D-209ENST00000509818 NBPF11Q86T75 865 aa10.5□□□□□ -0.73
SEC24D-209ENST00000509818 MAPKAPK5Q8IW41 473 aa10.5□□□□□ -0.73
SEC24D-209ENST00000509818 ZNF444Q8N0Y2 327 aaPredicted RBP10.5□□□□□ -0.73
SEC24D-209ENST00000509818 FBXW7Q969H0 707 aa10.5□□□□□ -0.73
SEC24D-209ENST00000509818 AIFM3Q96NN9 605 aa10.5□□□□□ -0.73
SEC24D-209ENST00000509818 RNF26Q9BY78 433 aaPredicted RBP10.5□□□□□ -0.73
SEC24D-209ENST00000509818 POLR3EQ9NVU0 708 aa10.5□□□□□ -0.73
SEC24D-209ENST00000509818 GRIN3BO60391 1043 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 LIG1P18858 919 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 U2AF2P26368 475 aaKnown RBP eCLIP10.49□□□□□ -0.732e-10■□□□□ 9.9
SEC24D-209ENST00000509818 TFAP4Q01664 338 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 STK38Q15208 465 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 OLFM4Q6UX06 510 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 PODNQ7Z5L7 613 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 DGKHQ86XP1 1220 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 KCNG4Q8TDN1 519 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 ANKS1AQ92625 1134 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 NUP62CLQ9H1M0 184 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 GJB4Q9NTQ9 266 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 TCP11L1Q9NUJ3 509 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 BRCA1P38398 1863 aaKnown RBP10.49□□□□□ -0.73
SEC24D-209ENST00000509818 NAV1Q8NEY1 1877 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 KIF28PB7ZC32 967 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 PRPF3O43395 683 aaKnown RBP10.49□□□□□ -0.73
SEC24D-209ENST00000509818 XBP1P17861 261 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 CHRNA5P30532 468 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 RHBDL3P58872 404 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 TGFB2P61812 414 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 EVX2Q03828 476 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 TROAPQ12815 778 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 DOK7Q18PE1 504 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 CC2D2BQ6DHV5 1058 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 LINC00301Q8NCQ3 95 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 CTCFLQ8NI51 663 aaPredicted RBP10.49□□□□□ -0.73
SEC24D-209ENST00000509818 DYNLL2Q96FJ2 89 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 DACT1Q9NYF0 836 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 DAGLAQ9Y4D2 1042 aa10.49□□□□□ -0.73
SEC24D-209ENST00000509818 KIF5BP33176 963 aa10.48□□□□□ -0.73
SEC24D-209ENST00000509818 ME1P48163 572 aa10.48□□□□□ -0.73
SEC24D-209ENST00000509818 FKBP1AP62942 108 aaKnown RBP10.48□□□□□ -0.73
SEC24D-209ENST00000509818 CCDC173Q0VFZ6 552 aa10.48□□□□□ -0.73
SEC24D-209ENST00000509818 SF3A1Q15459 793 aaKnown RBP10.48□□□□□ -0.73
SEC24D-209ENST00000509818 MAP3K11Q16584 847 aa10.48□□□□□ -0.73
SEC24D-209ENST00000509818 UVSSAQ2YD98 709 aa10.48□□□□□ -0.73
SEC24D-209ENST00000509818 ANO1Q5XXA6 986 aa10.48□□□□□ -0.73
SEC24D-209ENST00000509818 CCAR1Q8IX12 1150 aaKnown RBP10.48□□□□□ -0.73
SEC24D-209ENST00000509818 MAP3K14Q99558 947 aa10.48□□□□□ -0.73
SEC24D-209ENST00000509818 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.48□□□□□ -0.73
SEC24D-209ENST00000509818 FTOQ9C0B1 505 aaKnown RBP eCLIP10.48□□□□□ -0.73
SEC24D-209ENST00000509818 TNMDQ9H2S6 317 aa10.48□□□□□ -0.73
SEC24D-209ENST00000509818 CLSTN2Q9H4D0 955 aa10.48□□□□□ -0.73
SEC24D-209ENST00000509818 KAT14Q9H8E8 782 aa10.48□□□□□ -0.73
SEC24D-209ENST00000509818 SAP30BPQ9UHR5 308 aaKnown RBP10.48□□□□□ -0.73
SEC24D-209ENST00000509818 TTF2Q9UNY4 1162 aaKnown RBP10.48□□□□□ -0.73
SEC24D-209ENST00000509818 BCS1LQ9Y276 419 aa10.48□□□□□ -0.73
SEC24D-209ENST00000509818 A0A1W2PQ27 194 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms