RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 AFG3L2Q9Y4W6 797 aa13.18□□□□□ -0.3
TUSC3-208ENST00000509177 TRIM75PA6NK02 468 aa13.17□□□□□ -0.3
TUSC3-208ENST00000509177 CERS3Q8IU89 383 aa13.17□□□□□ -0.3
TUSC3-208ENST00000509177 PXYLP1Q8TE99 480 aa13.17□□□□□ -0.3
TUSC3-208ENST00000509177 DEFB118Q96PH6 123 aa13.17□□□□□ -0.3
TUSC3-208ENST00000509177 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
TUSC3-208ENST00000509177 SAP30BPQ9UHR5 308 aaKnown RBP13.17□□□□□ -0.3
TUSC3-208ENST00000509177 HERC5Q9UII4 1024 aaKnown RBP13.17□□□□□ -0.3
TUSC3-208ENST00000509177 SLC45A1Q9Y2W3 748 aa13.17□□□□□ -0.3
TUSC3-208ENST00000509177 DOCK2Q92608 1830 aa13.16□□□□□ -0.3
TUSC3-208ENST00000509177 PTPRFP10586 1907 aa13.16□□□□□ -0.3
TUSC3-208ENST00000509177 A0A1W2PPC1 479 aa13.16□□□□□ -0.3
TUSC3-208ENST00000509177 GOLIM4O00461 696 aa13.16□□□□□ -0.3
TUSC3-208ENST00000509177 DLL1O00548 723 aa13.16□□□□□ -0.3
TUSC3-208ENST00000509177 EVI5O60447 810 aa13.16□□□□□ -0.3
TUSC3-208ENST00000509177 TFRCP02786 760 aaKnown RBP13.16□□□□□ -0.3
TUSC3-208ENST00000509177 HLA-DOAP06340 250 aa13.16□□□□□ -0.3
TUSC3-208ENST00000509177 IRF5Q13568 498 aa13.16□□□□□ -0.3
TUSC3-208ENST00000509177 CCDC84Q86UT8 332 aaPredicted RBP13.16□□□□□ -0.3
TUSC3-208ENST00000509177 FOXP4Q8IVH2 680 aaPredicted RBP13.16□□□□□ -0.3
TUSC3-208ENST00000509177 SLC17A8Q8NDX2 589 aa13.16□□□□□ -0.3
TUSC3-208ENST00000509177 LRCH3Q96II8 777 aa13.16□□□□□ -0.3
TUSC3-208ENST00000509177 YTHDC1Q96MU7 727 aaKnown RBP13.16□□□□□ -0.3
TUSC3-208ENST00000509177 PAK6Q9NQU5 681 aaPredicted RBP13.16□□□□□ -0.3
TUSC3-208ENST00000509177 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.16□□□□□ -0.3
TUSC3-208ENST00000509177 STAP2Q9UGK3 403 aa13.16□□□□□ -0.3
TUSC3-208ENST00000509177 PALD1Q9ULE6 856 aa13.16□□□□□ -0.3
TUSC3-208ENST00000509177 PHIPQ8WWQ0 1821 aa13.16□□□□□ -0.3
TUSC3-208ENST00000509177 FLT1P17948 1338 aa13.15□□□□□ -0.3
TUSC3-208ENST00000509177 TNPO2O14787 897 aaKnown RBP13.15□□□□□ -0.3
TUSC3-208ENST00000509177 MYCNP04198 464 aaPredicted RBP13.15□□□□□ -0.3
TUSC3-208ENST00000509177 CAP2P40123 477 aa13.15□□□□□ -0.3
TUSC3-208ENST00000509177 SLC9C2Q5TAH2 1124 aa13.15□□□□□ -0.3
TUSC3-208ENST00000509177 TMED8Q6PL24 325 aaPredicted RBP13.15□□□□□ -0.3
TUSC3-208ENST00000509177 SMCR8Q8TEV9 937 aaPredicted RBP13.15□□□□□ -0.3
TUSC3-208ENST00000509177 LRRCC1Q9C099 1032 aa13.15□□□□□ -0.3
TUSC3-208ENST00000509177 CRISPLD2Q9H0B8 497 aa13.15□□□□□ -0.3
TUSC3-208ENST00000509177 U3KPZ7 1027 aaPredicted RBP13.15□□□□□ -0.3
TUSC3-208ENST00000509177 ALPK3Q96L96 1907 aa13.15□□□□□ -0.3
TUSC3-208ENST00000509177 UNC80Q8N2C7 3258 aa13.14□□□□□ -0.31
TUSC3-208ENST00000509177 DOCK3Q8IZD9 2030 aa13.14□□□□□ -0.31
TUSC3-208ENST00000509177 MAGEB6P1A0A0J9YX57 407 aa13.14□□□□□ -0.31
TUSC3-208ENST00000509177 USP17L5A8MUK1 530 aa13.14□□□□□ -0.31
TUSC3-208ENST00000509177 SPP2Q13103 211 aa13.14□□□□□ -0.31
TUSC3-208ENST00000509177 DIS3LQ8TF46 1054 aaKnown RBP13.14□□□□□ -0.31
TUSC3-208ENST00000509177 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.14□□□□□ -0.31
TUSC3-208ENST00000509177 PAWRQ96IZ0 340 aaKnown RBP13.14□□□□□ -0.31
TUSC3-208ENST00000509177 TBC1D2Q9BYX2 928 aa13.14□□□□□ -0.31
TUSC3-208ENST00000509177 BOLA2Q9H3K6 86 aa13.14□□□□□ -0.31
TUSC3-208ENST00000509177 AS3MTQ9HBK9 375 aa13.14□□□□□ -0.31
TUSC3-208ENST00000509177 COL2A1P02458 1487 aaPredicted RBP13.14□□□□□ -0.31
TUSC3-208ENST00000509177 CAPN2P17655 700 aa13.13□□□□□ -0.31
TUSC3-208ENST00000509177 TREML2Q5T2D2 321 aa13.13□□□□□ -0.31
TUSC3-208ENST00000509177 ANKRD13CQ8N6S4 541 aa13.13□□□□□ -0.31
TUSC3-208ENST00000509177 ZNF280CQ8ND82 737 aa13.13□□□□□ -0.31
TUSC3-208ENST00000509177 PAG1Q9NWQ8 432 aa13.13□□□□□ -0.31
TUSC3-208ENST00000509177 TAOK2Q9UL54 1235 aa13.13□□□□□ -0.31
TUSC3-208ENST00000509177 AGTPBP1Q9UPW5 1226 aa13.13□□□□□ -0.31
TUSC3-208ENST00000509177 DOCK1Q14185 1865 aa13.12□□□□□ -0.31
TUSC3-208ENST00000509177 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
TUSC3-208ENST00000509177 POLR3DP05423 398 aaPredicted RBP13.12□□□□□ -0.31
TUSC3-208ENST00000509177 ASNSP08243 561 aa13.12□□□□□ -0.31
TUSC3-208ENST00000509177 PDE6AP16499 860 aa13.12□□□□□ -0.31
TUSC3-208ENST00000509177 ATP5JP18859 108 aa13.12□□□□□ -0.31
TUSC3-208ENST00000509177 TTC6Q86TZ1 520 aa13.12□□□□□ -0.31
TUSC3-208ENST00000509177 COA7Q96BR5 231 aa13.12□□□□□ -0.31
TUSC3-208ENST00000509177 CRNKL1Q9BZJ0 848 aaKnown RBP13.12□□□□□ -0.31
TUSC3-208ENST00000509177 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.12□□□□□ -0.31
TUSC3-208ENST00000509177 ZNF532Q9HCE3 1301 aa13.12□□□□□ -0.31
TUSC3-208ENST00000509177 GDF11O95390 407 aa13.11□□□□□ -0.31
TUSC3-208ENST00000509177 HMGCS2P54868 508 aa13.11□□□□□ -0.31
TUSC3-208ENST00000509177 PABPC4Q13310 644 aaKnown RBP eCLIP13.11□□□□□ -0.31
TUSC3-208ENST00000509177 RRP1BQ14684 758 aaKnown RBP13.11□□□□□ -0.31
TUSC3-208ENST00000509177 FAM110CQ1W6H9 321 aa13.11□□□□□ -0.31
TUSC3-208ENST00000509177 NECAB2Q7Z6G3 386 aa13.11□□□□□ -0.31
TUSC3-208ENST00000509177 EDC3Q96F86 508 aaKnown RBP13.11□□□□□ -0.31
TUSC3-208ENST00000509177 GPATCH3Q96I76 525 aa13.11□□□□□ -0.31
TUSC3-208ENST00000509177 GDF15Q99988 308 aa13.11□□□□□ -0.31
TUSC3-208ENST00000509177 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.11□□□□□ -0.31
TUSC3-208ENST00000509177 TMOD4Q9NZQ9 345 aa13.11□□□□□ -0.31
TUSC3-208ENST00000509177 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
TUSC3-208ENST00000509177 MAST2Q6P0Q8 1798 aa13.1□□□□□ -0.31
TUSC3-208ENST00000509177 BMP8BP34820 402 aa13.1□□□□□ -0.31
TUSC3-208ENST00000509177 RRP1P56182 461 aaKnown RBP13.1□□□□□ -0.31
TUSC3-208ENST00000509177 TRIM32Q13049 653 aa13.1□□□□□ -0.31
TUSC3-208ENST00000509177 PROCA1Q8NCQ7 364 aaPredicted RBP13.1□□□□□ -0.31
TUSC3-208ENST00000509177 HAUS7Q99871 368 aa13.1□□□□□ -0.31
TUSC3-208ENST00000509177 RIOK1Q9BRS2 568 aaKnown RBP13.1□□□□□ -0.31
TUSC3-208ENST00000509177 GINM1Q9NU53 330 aa13.1□□□□□ -0.31
TUSC3-208ENST00000509177 SERPINB13Q9UIV8 391 aa13.1□□□□□ -0.31
TUSC3-208ENST00000509177 VCANP13611 3396 aa13.1□□□□□ -0.31
TUSC3-208ENST00000509177 LAMA2P24043 3122 aaKnown RBP13.09□□□□□ -0.31
TUSC3-208ENST00000509177 HMGCRP04035 888 aa13.09□□□□□ -0.31
TUSC3-208ENST00000509177 MNX1P50219 401 aaPredicted RBP13.09□□□□□ -0.31
TUSC3-208ENST00000509177 MTMR2Q13614 643 aa13.09□□□□□ -0.31
TUSC3-208ENST00000509177 ZSCAN25Q6NSZ9 544 aa13.09□□□□□ -0.31
TUSC3-208ENST00000509177 METTL16Q86W50 562 aaKnown RBP13.09□□□□□ -0.31
TUSC3-208ENST00000509177 C7orf61Q8IZ16 206 aa13.09□□□□□ -0.31
TUSC3-208ENST00000509177 ANKLE1Q8NAG6 615 aa13.09□□□□□ -0.31
TUSC3-208ENST00000509177 WDR18Q9BV38 432 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms