RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 HOXA7P31268 230 aaPredicted RBP15.2■□□□□ 0.02
PDPN-208ENST00000509009 IRF5Q13568 498 aa15.2■□□□□ 0.02
PDPN-208ENST00000509009 MTMR2Q13614 643 aa15.2■□□□□ 0.02
PDPN-208ENST00000509009 TTF1Q15361 905 aaPredicted RBP15.2■□□□□ 0.02
PDPN-208ENST00000509009 FAM110CQ1W6H9 321 aa15.2■□□□□ 0.02
PDPN-208ENST00000509009 TATDN1Q6P1N9 297 aa15.2■□□□□ 0.02
PDPN-208ENST00000509009 SLAIN1Q8ND83 568 aa15.2■□□□□ 0.02
PDPN-208ENST00000509009 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.2■□□□□ 0.02
PDPN-208ENST00000509009 P2RX7Q99572 595 aaKnown RBP15.2■□□□□ 0.02
PDPN-208ENST00000509009 ZBTB21Q9ULJ3 1066 aa15.2■□□□□ 0.02
PDPN-208ENST00000509009 PTPRFP10586 1907 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 RBBP6Q7Z6E9 1792 aaKnown RBP15.19■□□□□ 0.02
PDPN-208ENST00000509009 GJB1P08034 283 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 PDE6AP16499 860 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 UBXN2AP68543 259 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 PDE3AQ14432 1141 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 SLC9C2Q5TAH2 1124 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 C20orf194Q5TEA3 1177 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 TTC6Q86TZ1 520 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 PXYLP1Q8TE99 480 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 COA7Q96BR5 231 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 RNF208Q9H0X6 261 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 BCL11AQ9H165 835 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 TMOD4Q9NZQ9 345 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 SERPINB13Q9UIV8 391 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 CEP290O15078 2479 aa15.19■□□□□ 0.02
PDPN-208ENST00000509009 MAGEB6P1A0A0J9YX57 407 aa15.18■□□□□ 0.02
PDPN-208ENST00000509009 GOLIM4O00461 696 aa15.18■□□□□ 0.02
PDPN-208ENST00000509009 GH2P01242 217 aa15.18■□□□□ 0.02
PDPN-208ENST00000509009 ELNP15502 786 aa15.18■□□□□ 0.02
PDPN-208ENST00000509009 GJA8P48165 433 aa15.18■□□□□ 0.02
PDPN-208ENST00000509009 NKX2-3Q8TAU0 364 aa15.18■□□□□ 0.02
PDPN-208ENST00000509009 SHISA4Q96DD7 197 aa15.18■□□□□ 0.02
PDPN-208ENST00000509009 EHD4Q9H223 541 aa15.18■□□□□ 0.02
PDPN-208ENST00000509009 MORF4L1Q9UBU8 362 aa15.18■□□□□ 0.02
PDPN-208ENST00000509009 GJD2Q9UKL4 321 aa15.18■□□□□ 0.02
PDPN-208ENST00000509009 TCRBV5S4A2TA0A5A2 114 aa15.17■□□□□ 0.02
PDPN-208ENST00000509009 PLCD1P51178 756 aa15.17■□□□□ 0.02
PDPN-208ENST00000509009 EDC3Q96F86 508 aaKnown RBP15.17■□□□□ 0.02
PDPN-208ENST00000509009 DNAJC2Q99543 621 aaKnown RBP15.17■□□□□ 0.02
PDPN-208ENST00000509009 UNC93B1Q9H1C4 597 aa15.17■□□□□ 0.02
PDPN-208ENST00000509009 EMILIN3Q9NT22 766 aa15.17■□□□□ 0.02
PDPN-208ENST00000509009 SIPA1L1O43166 1804 aa15.17■□□□□ 0.02
PDPN-208ENST00000509009 ZNF532Q9HCE3 1301 aa15.17■□□□□ 0.02
PDPN-208ENST00000509009 DOCK3Q8IZD9 2030 aa15.16■□□□□ 0.02
PDPN-208ENST00000509009 ATP5JP18859 108 aa15.16■□□□□ 0.02
PDPN-208ENST00000509009 IRX3P78415 501 aaPredicted RBP15.16■□□□□ 0.02
PDPN-208ENST00000509009 CERKLQ49MI3 558 aaPredicted RBP15.16■□□□□ 0.02
PDPN-208ENST00000509009 USP17L2Q6R6M4 530 aa15.16■□□□□ 0.02
PDPN-208ENST00000509009 GCC1Q96CN9 775 aa15.16■□□□□ 0.02
PDPN-208ENST00000509009 CRNKL1Q9BZJ0 848 aaKnown RBP15.16■□□□□ 0.02
PDPN-208ENST00000509009 BOLA2Q9H3K6 86 aa15.16■□□□□ 0.02
PDPN-208ENST00000509009 RBPJLQ9UBG7 517 aa15.16■□□□□ 0.02
PDPN-208ENST00000509009 MAST2Q6P0Q8 1798 aa15.16■□□□□ 0.02
PDPN-208ENST00000509009 CDK5RAP2Q96SN8 1893 aa15.15■□□□□ 0.02
PDPN-208ENST00000509009 PEX10O60683 326 aa15.15■□□□□ 0.02
PDPN-208ENST00000509009 SGPL1O95470 568 aa15.15■□□□□ 0.02
PDPN-208ENST00000509009 INHAP05111 366 aa15.15■□□□□ 0.02
PDPN-208ENST00000509009 POLR3DP05423 398 aaPredicted RBP15.15■□□□□ 0.02
PDPN-208ENST00000509009 SHMT1P34896 483 aa15.15■□□□□ 0.02
PDPN-208ENST00000509009 HERVK_113P62684 666 aa15.15■□□□□ 0.02
PDPN-208ENST00000509009 ABCB5Q2M3G0 1257 aa15.15■□□□□ 0.02
PDPN-208ENST00000509009 Q3C1V9 767 aa15.15■□□□□ 0.02
PDPN-208ENST00000509009 UBE2Q1Q7Z7E8 422 aa15.15■□□□□ 0.02
PDPN-208ENST00000509009 U2AF1L4Q8WU68 220 aaKnown RBP15.15■□□□□ 0.02
PDPN-208ENST00000509009 TXNRD2Q9NNW7 524 aa15.15■□□□□ 0.02
PDPN-208ENST00000509009 MGAMO43451 1857 aa15.14■□□□□ 0.01
PDPN-208ENST00000509009 GABPAQ06546 454 aa15.14■□□□□ 0.01
PDPN-208ENST00000509009 SLFNL1Q499Z3 407 aa15.14■□□□□ 0.01
PDPN-208ENST00000509009 POTEEQ6S8J3 1075 aa15.14■□□□□ 0.01
PDPN-208ENST00000509009 GPRC5AQ8NFJ5 357 aa15.14■□□□□ 0.01
PDPN-208ENST00000509009 ACER1Q8TDN7 264 aa15.14■□□□□ 0.01
PDPN-208ENST00000509009 HAUS7Q99871 368 aa15.14■□□□□ 0.01
PDPN-208ENST00000509009 PAG1Q9NWQ8 432 aa15.14■□□□□ 0.01
PDPN-208ENST00000509009 TAOK2Q9UL54 1235 aa15.14■□□□□ 0.01
PDPN-208ENST00000509009 FOCADQ5VW36 1801 aa15.13■□□□□ 0.01
PDPN-208ENST00000509009 ATAD5Q96QE3 1844 aa15.13■□□□□ 0.01
PDPN-208ENST00000509009 GUCY1A2P33402 732 aa15.13■□□□□ 0.01
PDPN-208ENST00000509009 EVX2Q03828 476 aa15.13■□□□□ 0.01
PDPN-208ENST00000509009 RAB3GAP1Q15042 981 aa15.13■□□□□ 0.01
PDPN-208ENST00000509009 HABP4Q5JVS0 413 aaKnown RBP15.13■□□□□ 0.01
PDPN-208ENST00000509009 LCORLQ8N3X6 602 aa15.13■□□□□ 0.01
PDPN-208ENST00000509009 SDR42E1Q8WUS8 393 aa15.13■□□□□ 0.01
PDPN-208ENST00000509009 C12orf42Q96LP6 360 aa15.13■□□□□ 0.01
PDPN-208ENST00000509009 LRRCC1Q9C099 1032 aa15.13■□□□□ 0.01
PDPN-208ENST00000509009 ARMT1Q9H993 441 aa15.13■□□□□ 0.01
PDPN-208ENST00000509009 CABP5Q9NP86 173 aa15.13■□□□□ 0.01
PDPN-208ENST00000509009 DCP1AQ9NPI6 582 aaPredicted RBP15.13■□□□□ 0.01
PDPN-208ENST00000509009 MCM9Q9NXL9 1143 aa15.13■□□□□ 0.01
PDPN-208ENST00000509009 LOC285556D6RIA3 1793 aa15.13■□□□□ 0.01
PDPN-208ENST00000509009 USP17L15C9J2P7 530 aa15.12■□□□□ 0.01
PDPN-208ENST00000509009 USP17L13C9JLJ4 530 aa15.12■□□□□ 0.01
PDPN-208ENST00000509009 USP17L11C9JVI0 530 aa15.12■□□□□ 0.01
PDPN-208ENST00000509009 USP17L18D6R9N7 530 aa15.12■□□□□ 0.01
PDPN-208ENST00000509009 USP17L22D6RA61 530 aa15.12■□□□□ 0.01
PDPN-208ENST00000509009 USP17L17D6RBQ6 530 aa15.12■□□□□ 0.01
PDPN-208ENST00000509009 USP17L19D6RCP7 530 aa15.12■□□□□ 0.01
PDPN-208ENST00000509009 USP17L20D6RJB6 530 aa15.12■□□□□ 0.01
PDPN-208ENST00000509009 SMARCA5O60264 1052 aaPredicted RBP15.12■□□□□ 0.01
PDPN-208ENST00000509009 TFRCP02786 760 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms