RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 PRKAB2O43741 272 aa28.27■■■□□ 2.12
CSNK1G3-204ENST00000508708 MX1P20591 662 aa28.27■■■□□ 2.12
CSNK1G3-204ENST00000508708 GADL1Q6ZQY3 521 aa28.27■■■□□ 2.12
CSNK1G3-204ENST00000508708 PARK7Q99497 189 aaKnown RBP28.27■■■□□ 2.12
CSNK1G3-204ENST00000508708 WDR18Q9BV38 432 aa28.27■■■□□ 2.12
CSNK1G3-204ENST00000508708 SHMT1P34896 483 aa28.26■■■□□ 2.11
CSNK1G3-204ENST00000508708 ANKRD45Q5TZF3 282 aa28.26■■■□□ 2.11
CSNK1G3-204ENST00000508708 MCM9Q9NXL9 1143 aa28.26■■■□□ 2.11
CSNK1G3-204ENST00000508708 AGTPBP1Q9UPW5 1226 aa28.26■■■□□ 2.11
CSNK1G3-204ENST00000508708 ERC2O15083 957 aa28.25■■■□□ 2.11
CSNK1G3-204ENST00000508708 GLRX3O76003 335 aaKnown RBP28.25■■■□□ 2.11
CSNK1G3-204ENST00000508708 CYP2C8P10632 490 aa28.25■■■□□ 2.11
CSNK1G3-204ENST00000508708 SH3D19Q5HYK7 790 aa28.25■■■□□ 2.11
CSNK1G3-204ENST00000508708 TREML2Q5T2D2 321 aa28.25■■■□□ 2.11
CSNK1G3-204ENST00000508708 SMC5Q8IY18 1101 aa28.25■■■□□ 2.11
CSNK1G3-204ENST00000508708 PROCA1Q8NCQ7 364 aaPredicted RBP28.25■■■□□ 2.11
CSNK1G3-204ENST00000508708 AS3MTQ9HBK9 375 aa28.25■■■□□ 2.11
CSNK1G3-204ENST00000508708 CPA4Q9UI42 421 aa28.25■■■□□ 2.11
CSNK1G3-204ENST00000508708 BAZ2AQ9UIF9 1905 aaKnown RBP28.25■■■□□ 2.11
CSNK1G3-204ENST00000508708 POLR3DP05423 398 aaPredicted RBP28.24■■■□□ 2.11
CSNK1G3-204ENST00000508708 EFCC1Q9HA90 598 aa28.24■■■□□ 2.11
CSNK1G3-204ENST00000508708 ATP8A2Q9NTI2 1148 aa28.24■■■□□ 2.11
CSNK1G3-204ENST00000508708 CYP2D6P10635 497 aa28.23■■■□□ 2.11
CSNK1G3-204ENST00000508708 BCRP11274 1271 aa28.23■■■□□ 2.11
CSNK1G3-204ENST00000508708 HMGCS2P54868 508 aa28.23■■■□□ 2.11
CSNK1G3-204ENST00000508708 LACTBP83111 547 aaPredicted RBP28.23■■■□□ 2.11
CSNK1G3-204ENST00000508708 GH2P01242 217 aa28.22■■■□□ 2.11
CSNK1G3-204ENST00000508708 MTMR2Q13614 643 aa28.22■■■□□ 2.11
CSNK1G3-204ENST00000508708 APPBP2Q92624 585 aa28.22■■■□□ 2.11
CSNK1G3-204ENST00000508708 OSBP2Q969R2 916 aa28.22■■■□□ 2.11
CSNK1G3-204ENST00000508708 ARHGAP39Q9C0H5 1083 aa28.22■■■□□ 2.11
CSNK1G3-204ENST00000508708 STAP2Q9UGK3 403 aa28.22■■■□□ 2.11
CSNK1G3-204ENST00000508708 RNF113AO15541 343 aaKnown RBP28.21■■■□□ 2.11
CSNK1G3-204ENST00000508708 BACE1P56817 501 aa28.21■■■□□ 2.11
CSNK1G3-204ENST00000508708 PTPN22Q9Y2R2 807 aa28.21■■■□□ 2.11
CSNK1G3-204ENST00000508708 IGHDP01880 384 aa28.2■■■□□ 2.1
CSNK1G3-204ENST00000508708 ZFYP08048 801 aaPredicted RBP28.2■■■□□ 2.1
CSNK1G3-204ENST00000508708 CTGFP29279 349 aa28.2■■■□□ 2.1
CSNK1G3-204ENST00000508708 CERKLQ49MI3 558 aaPredicted RBP28.2■■■□□ 2.1
CSNK1G3-204ENST00000508708 STRBPQ96SI9 672 aaKnown RBP28.2■■■□□ 2.1
CSNK1G3-204ENST00000508708 SLC4A4Q9Y6R1 1079 aa28.2■■■□□ 2.1
CSNK1G3-204ENST00000508708 BRCA2P51587 3418 aa28.2■■■□□ 2.1
CSNK1G3-204ENST00000508708 SMIM22K7EJ46 135 aa28.19■■■□□ 2.1
CSNK1G3-204ENST00000508708 SLC44A5Q8NCS7 719 aa28.19■■■□□ 2.1
CSNK1G3-204ENST00000508708 RWDD1Q9H446 243 aaPredicted RBP28.19■■■□□ 2.1
CSNK1G3-204ENST00000508708 PDE1AP54750 535 aa28.18■■■□□ 2.1
CSNK1G3-204ENST00000508708 C12orf60Q5U649 245 aa28.18■■■□□ 2.1
CSNK1G3-204ENST00000508708 ZBTB47Q9UFB7 747 aaPredicted RBP28.18■■■□□ 2.1
CSNK1G3-204ENST00000508708 TAOK2Q9UL54 1235 aa28.18■■■□□ 2.1
CSNK1G3-204ENST00000508708 CYP2D7A0A087X1C5 515 aa28.17■■■□□ 2.1
CSNK1G3-204ENST00000508708 GUCY1A2P33402 732 aa28.17■■■□□ 2.1
CSNK1G3-204ENST00000508708 ABCB5Q2M3G0 1257 aa28.17■■■□□ 2.1
CSNK1G3-204ENST00000508708 USP17L10C9JJH3 530 aa28.16■■■□□ 2.1
CSNK1G3-204ENST00000508708 USP17L12C9JPN9 530 aa28.16■■■□□ 2.1
CSNK1G3-204ENST00000508708 USP17L21D6R901 530 aa28.16■■■□□ 2.1
CSNK1G3-204ENST00000508708 M0R2C6 588 aa28.16■■■□□ 2.1
CSNK1G3-204ENST00000508708 DYNLL2Q96FJ2 89 aa28.16■■■□□ 2.1
CSNK1G3-204ENST00000508708 LNPKQ9C0E8 428 aa28.16■■■□□ 2.1
CSNK1G3-204ENST00000508708 SWAP70Q9UH65 585 aa28.16■■■□□ 2.1
CSNK1G3-204ENST00000508708 PNMA3Q9UL41 463 aa28.16■■■□□ 2.1
CSNK1G3-204ENST00000508708 GSG1L2A8MUP6 293 aa28.15■■■□□ 2.1
CSNK1G3-204ENST00000508708 C19orf81C9J6K1 198 aa28.15■■■□□ 2.1
CSNK1G3-204ENST00000508708 GPAA1O43292 621 aa28.15■■■□□ 2.1
CSNK1G3-204ENST00000508708 ARHGEF6Q15052 776 aa28.15■■■□□ 2.1
CSNK1G3-204ENST00000508708 TRIM47Q96LD4 638 aa28.15■■■□□ 2.1
CSNK1G3-204ENST00000508708 FSD1Q9BTV5 496 aa28.15■■■□□ 2.1
CSNK1G3-204ENST00000508708 MYH8P13535 1937 aa28.14■■■□□ 2.1
CSNK1G3-204ENST00000508708 RGS19P49795 217 aa28.14■■■□□ 2.1
CSNK1G3-204ENST00000508708 KIF22Q14807 665 aa28.14■■■□□ 2.1
CSNK1G3-204ENST00000508708 CTR9Q6PD62 1173 aa28.14■■■□□ 2.1
CSNK1G3-204ENST00000508708 SMCR8Q8TEV9 937 aaPredicted RBP28.14■■■□□ 2.1
CSNK1G3-204ENST00000508708 ASCC2Q9H1I8 757 aaPredicted RBP28.14■■■□□ 2.1
CSNK1G3-204ENST00000508708 EPB41L4AQ9HCS5 686 aaPredicted RBP28.14■■■□□ 2.1
CSNK1G3-204ENST00000508708 EMILIN3Q9NT22 766 aa28.14■■■□□ 2.1
CSNK1G3-204ENST00000508708 GNRH1P01148 92 aa28.13■■■□□ 2.09
CSNK1G3-204ENST00000508708 HOXA7P31268 230 aaPredicted RBP28.13■■■□□ 2.09
CSNK1G3-204ENST00000508708 PABPC4Q13310 644 aaKnown RBP eCLIP28.13■■■□□ 2.09
CSNK1G3-204ENST00000508708 RAB3GAP1Q15042 981 aa28.13■■■□□ 2.09
CSNK1G3-204ENST00000508708 LRRFIP1Q32MZ4 808 aaKnown RBP28.13■■■□□ 2.09
CSNK1G3-204ENST00000508708 ZMYM1Q5SVZ6 1142 aa28.13■■■□□ 2.09
CSNK1G3-204ENST00000508708 C16orf86Q6ZW13 317 aa28.13■■■□□ 2.09
CSNK1G3-204ENST00000508708 C12orf42Q96LP6 360 aa28.13■■■□□ 2.09
CSNK1G3-204ENST00000508708 SEC62Q99442 399 aaKnown RBP28.13■■■□□ 2.09
CSNK1G3-204ENST00000508708 TMOD4Q9NZQ9 345 aa28.13■■■□□ 2.09
CSNK1G3-204ENST00000508708 ARPP21Q9UBL0 812 aaPredicted RBP28.13■■■□□ 2.09
CSNK1G3-204ENST00000508708 PTCH2Q9Y6C5 1203 aa28.13■■■□□ 2.09
CSNK1G3-204ENST00000508708 MGAMO43451 1857 aa28.12■■■□□ 2.09
CSNK1G3-204ENST00000508708 PSMC4P43686 418 aa28.12■■■□□ 2.09
CSNK1G3-204ENST00000508708 NUCB1Q02818 461 aa28.12■■■□□ 2.09
CSNK1G3-204ENST00000508708 B4GALNT3Q6L9W6 998 aa28.12■■■□□ 2.09
CSNK1G3-204ENST00000508708 GIMAP6Q6P9H5 292 aa28.12■■■□□ 2.09
CSNK1G3-204ENST00000508708 ACER1Q8TDN7 264 aa28.12■■■□□ 2.09
CSNK1G3-204ENST00000508708 ARMC5Q96C12 935 aa28.12■■■□□ 2.09
CSNK1G3-204ENST00000508708 DDRGK1Q96HY6 314 aa28.12■■■□□ 2.09
CSNK1G3-204ENST00000508708 CABP5Q9NP86 173 aa28.12■■■□□ 2.09
CSNK1G3-204ENST00000508708 SOX10P56693 466 aa28.11■■■□□ 2.09
CSNK1G3-204ENST00000508708 SEPT2Q15019 361 aa28.11■■■□□ 2.09
CSNK1G3-204ENST00000508708 FAM110CQ1W6H9 321 aa28.11■■■□□ 2.09
CSNK1G3-204ENST00000508708 SBK1Q52WX2 424 aa28.11■■■□□ 2.09
CSNK1G3-204ENST00000508708 CHD1LQ86WJ1 897 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms