RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 LRRC37AA6NMS7 1700 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 LTBP1Q14766 1721 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 CCDC69A6NI79 296 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 GOLGA8AA7E2F4 631 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 UBE2Q2LH0YL09 131 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 KIF2AO00139 706 aaPredicted RBP12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 RANBP6O60518 1105 aaKnown RBP12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 YEATS4O95619 227 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 SRGNP10124 158 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 GSDMDP57764 484 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 SNW1Q13573 536 aaKnown RBP12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 WTAPQ15007 396 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 SPTY2D1Q68D10 685 aaPredicted RBP12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 ZNF710Q8N1W2 664 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 MRPS27Q92552 414 aaKnown RBP12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 C8orf76Q96K31 380 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 USP28Q96RU2 1077 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 BPIFA3Q9BQP9 254 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 PODXL2Q9NZ53 605 aa12.72□□□□□ -0.37
SH3RF1-203ENST00000508685 NRXN2Q9P2S2 1712 aa12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 C6orf229H3BNL8 230 aa12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 ZBTB22O15209 634 aa12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 CYP2D6P10635 497 aa12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 ME1P48163 572 aa12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 SART3Q15020 963 aaKnown RBP12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 ZRSR1Q15695 479 aaKnown RBP12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 NTRK3Q16288 839 aa12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 LRRC8AQ8IWT6 810 aa12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 PDCL2Q8N4E4 241 aa12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 FBXO18Q8NFZ0 1043 aa12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 ESR2Q92731 530 aa12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 UBAC1Q9BSL1 405 aa12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 IMPACTQ9P2X3 320 aa12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 TNKSO95271 1327 aa12.71□□□□□ -0.37
SH3RF1-203ENST00000508685 ERICH2A1L162 156 aa12.71□□□□□ -0.38
SH3RF1-203ENST00000508685 TUBB4AP04350 444 aa12.71□□□□□ -0.38
SH3RF1-203ENST00000508685 TNNT1P13805 278 aa12.71□□□□□ -0.38
SH3RF1-203ENST00000508685 IL1R1P14778 569 aa12.71□□□□□ -0.38
SH3RF1-203ENST00000508685 TPM4P67936 248 aa12.71□□□□□ -0.38
SH3RF1-203ENST00000508685 FSIP1Q8NA03 581 aa12.71□□□□□ -0.38
SH3RF1-203ENST00000508685 FEZ1Q99689 392 aa12.71□□□□□ -0.38
SH3RF1-203ENST00000508685 POLR3EQ9NVU0 708 aa12.71□□□□□ -0.38
SH3RF1-203ENST00000508685 COL11A2P13942 1736 aaPredicted RBP12.7□□□□□ -0.38
SH3RF1-203ENST00000508685 TPD52L1Q16890 204 aaPredicted RBP12.7□□□□□ -0.38
SH3RF1-203ENST00000508685 CMTR1Q8N1G2 835 aaKnown RBP12.7□□□□□ -0.38
SH3RF1-203ENST00000508685 SH3RF3Q8TEJ3 882 aaPredicted RBP12.7□□□□□ -0.38
SH3RF1-203ENST00000508685 CACTINQ8WUQ7 758 aaKnown RBP12.7□□□□□ -0.38
SH3RF1-203ENST00000508685 ATP8A2Q9NTI2 1148 aa12.7□□□□□ -0.38
SH3RF1-203ENST00000508685 KIAA1551Q9HCM1 1747 aa12.7□□□□□ -0.38
SH3RF1-203ENST00000508685 MYH2Q9UKX2 1941 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 CDKL5O76039 1030 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 USP17L8P0C7I0 530 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 PTGER2P43116 358 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 SEC23AQ15436 765 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 SF3A1Q15459 793 aaKnown RBP12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 FMR1NBQ8N0W7 255 aaPredicted RBP12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 ENAHQ8N8S7 591 aaPredicted RBP12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 CCDC112Q8NEF3 446 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 SDF4Q9BRK5 362 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 MCM9Q9NXL9 1143 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 PPP1R1BQ9UD71 204 aaPredicted RBP12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 NRBP1Q9UHY1 535 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 ATP6V0A2Q9Y487 856 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 PARP3Q9Y6F1 533 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 LAMB1P07942 1786 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 KIF28PB7ZC32 967 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 RIMBP2O15034 1052 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 NRDCO43847 1150 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 POLR3DP05423 398 aaPredicted RBP12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 STK38Q15208 465 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 MFSD14BQ5SR56 506 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 SYNE3Q6ZMZ3 975 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 SP8Q8IXZ3 490 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 ZNF654Q8IZM8 581 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 CCDC82Q8N4S0 544 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 NUP133Q8WUM0 1156 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 ZSCAN10Q96SZ4 725 aaPredicted RBP12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 ALG1Q9BT22 464 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 GOLPH3LQ9H4A5 285 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 ARPP21Q9UBL0 812 aaPredicted RBP12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 PCDHA7Q9UN72 937 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 ECM29Q5VYK3 1845 aa12.69□□□□□ -0.38
SH3RF1-203ENST00000508685 NID2Q14112 1375 aa12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 MROH7-TTC4A0A0A0MT08 1334 aa12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 NMT2O60551 498 aa12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 FGRP09769 529 aa12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 NPR1P16066 1061 aa12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 POLD1P28340 1107 aa12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 IARSP41252 1262 aaKnown RBP12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 LRMPQ12912 555 aa12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 TMED8Q6PL24 325 aaPredicted RBP12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 CPLX2Q6PUV4 134 aaKnown RBP12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 C11orf57Q6ZUT1 292 aaPredicted RBP12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 DHX40Q8IX18 779 aaKnown RBP12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 LINC00301Q8NCQ3 95 aa12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 SLC26A6Q9BXS9 759 aa12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 RTFDC1Q9BY42 306 aaPredicted RBP12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 MKRN1Q9UHC7 482 aaKnown RBP12.68□□□□□ -0.38
SH3RF1-203ENST00000508685 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms