RNA–Protein interactions for RNA: ENST00000508639.5

SIL1-210, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-210ENST00000508639 BIN2Q9UBW5 565 aaPredicted RBP12.9□□□□□ -0.34
SIL1-210ENST00000508639 SAP30BPQ9UHR5 308 aaKnown RBP12.9□□□□□ -0.34
SIL1-210ENST00000508639 CNMDO75829 334 aa12.89□□□□□ -0.35
SIL1-210ENST00000508639 GDF11O95390 407 aa12.89□□□□□ -0.35
SIL1-210ENST00000508639 UBXN2AP68543 259 aa12.89□□□□□ -0.35
SIL1-210ENST00000508639 MTMR2Q13614 643 aa12.89□□□□□ -0.35
SIL1-210ENST00000508639 SIRT2Q8IXJ6 389 aa12.89□□□□□ -0.35
SIL1-210ENST00000508639 NKX2-3Q8TAU0 364 aa12.89□□□□□ -0.35
SIL1-210ENST00000508639 PANK1Q8TE04 598 aa12.89□□□□□ -0.35
SIL1-210ENST00000508639 SMCR8Q8TEV9 937 aaPredicted RBP12.89□□□□□ -0.35
SIL1-210ENST00000508639 USP6NLQ92738 828 aa12.89□□□□□ -0.35
SIL1-210ENST00000508639 DPF3Q92784 378 aa12.89□□□□□ -0.35
SIL1-210ENST00000508639 DHX36Q9H2U1 1008 aaKnown RBP12.89□□□□□ -0.35
SIL1-210ENST00000508639 FARP2O94887 1054 aaPredicted RBP12.88□□□□□ -0.35
SIL1-210ENST00000508639 CYP7A1P22680 504 aa12.88□□□□□ -0.35
SIL1-210ENST00000508639 GUCY1A2P33402 732 aa12.88□□□□□ -0.35
SIL1-210ENST00000508639 CCDC158Q5M9N0 1113 aa12.88□□□□□ -0.35
SIL1-210ENST00000508639 TATDN1Q6P1N9 297 aa12.88□□□□□ -0.35
SIL1-210ENST00000508639 MIGA1Q8NAN2 632 aa12.88□□□□□ -0.35
SIL1-210ENST00000508639 TRIB2Q92519 343 aa12.88□□□□□ -0.35
SIL1-210ENST00000508639 PAWRQ96IZ0 340 aaKnown RBP12.88□□□□□ -0.35
SIL1-210ENST00000508639 RIOK1Q9BRS2 568 aaKnown RBP12.88□□□□□ -0.35
SIL1-210ENST00000508639 PORCNQ9H237 461 aa12.88□□□□□ -0.35
SIL1-210ENST00000508639 COL6A3P12111 3177 aa12.87□□□□□ -0.35
SIL1-210ENST00000508639 SMIM22K7EJ46 135 aa12.87□□□□□ -0.35
SIL1-210ENST00000508639 SOX1O00570 391 aaPredicted RBP12.87□□□□□ -0.35
SIL1-210ENST00000508639 GCLCP48506 637 aaPredicted RBP12.87□□□□□ -0.35
SIL1-210ENST00000508639 SLFNL1Q499Z3 407 aa12.87□□□□□ -0.35
SIL1-210ENST00000508639 MAP3K21Q5TCX8 1036 aa12.87□□□□□ -0.35
SIL1-210ENST00000508639 ZBTB21Q9ULJ3 1066 aa12.87□□□□□ -0.35
SIL1-210ENST00000508639 EXOC6BQ9Y2D4 811 aa12.87□□□□□ -0.35
SIL1-210ENST00000508639 RLFQ13129 1914 aa12.87□□□□□ -0.35
SIL1-210ENST00000508639 DDX60LQ5H9U9 1706 aaKnown RBP12.87□□□□□ -0.35
SIL1-210ENST00000508639 DNAH12Q6ZR08 3092 aa12.87□□□□□ -0.35
SIL1-210ENST00000508639 BAG3O95817 575 aa12.86□□□□□ -0.35
SIL1-210ENST00000508639 TFRCP02786 760 aaKnown RBP12.86□□□□□ -0.35
SIL1-210ENST00000508639 CHGBP05060 677 aa12.86□□□□□ -0.35
SIL1-210ENST00000508639 ASNSP08243 561 aa12.86□□□□□ -0.35
SIL1-210ENST00000508639 PLCD1P51178 756 aa12.86□□□□□ -0.35
SIL1-210ENST00000508639 HERVK_113P62684 666 aa12.86□□□□□ -0.35
SIL1-210ENST00000508639 HNRNPUQ00839 825 aaKnown RBP eCLIP12.86□□□□□ -0.35
SIL1-210ENST00000508639 ITPRIPQ8IWB1 547 aa12.86□□□□□ -0.35
SIL1-210ENST00000508639 MAGEB6Q8N7X4 407 aa12.86□□□□□ -0.35
SIL1-210ENST00000508639 ACER1Q8TDN7 264 aa12.86□□□□□ -0.35
SIL1-210ENST00000508639 COA7Q96BR5 231 aa12.86□□□□□ -0.35
SIL1-210ENST00000508639 TBC1D2Q9BYX2 928 aa12.86□□□□□ -0.35
SIL1-210ENST00000508639 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.86□□□□□ -0.35
SIL1-210ENST00000508639 C19orf81C9J6K1 198 aa12.85□□□□□ -0.35
SIL1-210ENST00000508639 USP17L10C9JJH3 530 aa12.85□□□□□ -0.35
SIL1-210ENST00000508639 GH2P01242 217 aa12.85□□□□□ -0.35
SIL1-210ENST00000508639 IGHA2P01877 340 aa12.85□□□□□ -0.35
SIL1-210ENST00000508639 SHMT1P34896 483 aa12.85□□□□□ -0.35
SIL1-210ENST00000508639 GABPAQ06546 454 aa12.85□□□□□ -0.35
SIL1-210ENST00000508639 OS9Q13438 667 aaPredicted RBP12.85□□□□□ -0.35
SIL1-210ENST00000508639 CCL14Q16627 93 aa12.85□□□□□ -0.35
SIL1-210ENST00000508639 KIAA1755Q5JYT7 1200 aa12.85□□□□□ -0.35
SIL1-210ENST00000508639 MORN1Q5T089 497 aa12.85□□□□□ -0.35
SIL1-210ENST00000508639 EDC3Q96F86 508 aaKnown RBP12.85□□□□□ -0.35
SIL1-210ENST00000508639 IL1RAPL2Q9NP60 686 aa12.85□□□□□ -0.35
SIL1-210ENST00000508639 PNMA3Q9UL41 463 aa12.85□□□□□ -0.35
SIL1-210ENST00000508639 TAOK2Q9UL54 1235 aa12.85□□□□□ -0.35
SIL1-210ENST00000508639 TCRBV5S4A2TA0A5A2 114 aa12.84□□□□□ -0.35
SIL1-210ENST00000508639 IDH1O75874 414 aaKnown RBP12.84□□□□□ -0.35
SIL1-210ENST00000508639 HMGCRP04035 888 aa12.84□□□□□ -0.35
SIL1-210ENST00000508639 PLCG2P16885 1265 aa12.84□□□□□ -0.35
SIL1-210ENST00000508639 CYP2B6P20813 491 aa12.84□□□□□ -0.35
SIL1-210ENST00000508639 SIAH1Q8IUQ4 282 aa12.84□□□□□ -0.35
SIL1-210ENST00000508639 AS3MTQ9HBK9 375 aa12.84□□□□□ -0.35
SIL1-210ENST00000508639 FLRT1Q9NZU1 646 aa12.84□□□□□ -0.35
SIL1-210ENST00000508639 STAP2Q9UGK3 403 aa12.84□□□□□ -0.35
SIL1-210ENST00000508639 PFASO15067 1338 aa12.84□□□□□ -0.35
SIL1-210ENST00000508639 RPTORQ8N122 1335 aa12.84□□□□□ -0.35
SIL1-210ENST00000508639 A0A1W2PRG0 241 aa12.83□□□□□ -0.36
SIL1-210ENST00000508639 IGSF3O75054 1194 aa12.83□□□□□ -0.36
SIL1-210ENST00000508639 ERVK-9P63128 1117 aa12.83□□□□□ -0.36
SIL1-210ENST00000508639 ERVK-24P63145 666 aa12.83□□□□□ -0.36
SIL1-210ENST00000508639 CACNB2Q08289 660 aaPredicted RBP12.83□□□□□ -0.36
SIL1-210ENST00000508639 LHX8Q68G74 356 aa12.83□□□□□ -0.36
SIL1-210ENST00000508639 AACSQ86V21 672 aa12.83□□□□□ -0.36
SIL1-210ENST00000508639 RHPN1Q8TCX5 695 aa12.83□□□□□ -0.36
SIL1-210ENST00000508639 C12orf42Q96LP6 360 aa12.83□□□□□ -0.36
SIL1-210ENST00000508639 GDF15Q99988 308 aa12.83□□□□□ -0.36
SIL1-210ENST00000508639 HTATIP2Q9BUP3 242 aa12.83□□□□□ -0.36
SIL1-210ENST00000508639 BTBD7Q9P203 1132 aa12.83□□□□□ -0.36
SIL1-210ENST00000508639 OGDHLQ9ULD0 1010 aa12.83□□□□□ -0.36
SIL1-210ENST00000508639 CYP2D6P10635 497 aa12.82□□□□□ -0.36
SIL1-210ENST00000508639 CCND3P30281 292 aaPredicted RBP12.82□□□□□ -0.36
SIL1-210ENST00000508639 PABPC4Q13310 644 aaKnown RBP eCLIP12.82□□□□□ -0.36
SIL1-210ENST00000508639 CATSPERGQ6ZRH7 1159 aa12.82□□□□□ -0.36
SIL1-210ENST00000508639 GPR142Q7Z601 462 aa12.82□□□□□ -0.36
SIL1-210ENST00000508639 CRACR2BQ8N4Y2 399 aaPredicted RBP12.82□□□□□ -0.36
SIL1-210ENST00000508639 GPRC5AQ8NFJ5 357 aa12.82□□□□□ -0.36
SIL1-210ENST00000508639 EHD4Q9H223 541 aa12.82□□□□□ -0.36
SIL1-210ENST00000508639 GINM1Q9NU53 330 aa12.82□□□□□ -0.36
SIL1-210ENST00000508639 A0A0C4DFX4 3053 aa12.81□□□□□ -0.36
SIL1-210ENST00000508639 LAMA2P24043 3122 aaKnown RBP12.81□□□□□ -0.36
SIL1-210ENST00000508639 COL6A1P12109 1028 aa12.81□□□□□ -0.36
SIL1-210ENST00000508639 XRCC5P13010 732 aaKnown RBP12.81□□□□□ -0.36
SIL1-210ENST00000508639 PDE6AP16499 860 aa12.81□□□□□ -0.36
SIL1-210ENST00000508639 IRX3P78415 501 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms