RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.66■□□□□ 0.9
TRIM60-203ENST00000508504 CERKLQ49MI3 558 aaPredicted RBP20.65■□□□□ 0.9
TRIM60-203ENST00000508504 CLEC10AQ8IUN9 316 aa20.65■□□□□ 0.9
TRIM60-203ENST00000508504 ZKSCAN3Q9BRR0 538 aa20.65■□□□□ 0.9
TRIM60-203ENST00000508504 LRRC2Q9BYS8 371 aa20.65■□□□□ 0.9
TRIM60-203ENST00000508504 PCNTO95613 3336 aa20.65■□□□□ 0.9
TRIM60-203ENST00000508504 TFAP4Q01664 338 aa20.64■□□□□ 0.9
TRIM60-203ENST00000508504 TRDNQ13061 729 aa20.64■□□□□ 0.9
TRIM60-203ENST00000508504 KRT32Q14532 448 aa20.64■□□□□ 0.9
TRIM60-203ENST00000508504 RALYLQ86SE5 291 aaKnown RBP20.64■□□□□ 0.9
TRIM60-203ENST00000508504 ZKSCAN4Q969J2 545 aaPredicted RBP20.64■□□□□ 0.9
TRIM60-203ENST00000508504 KLRG1Q96E93 195 aa20.64■□□□□ 0.9
TRIM60-203ENST00000508504 WRNIP1Q96S55 665 aa20.64■□□□□ 0.9
TRIM60-203ENST00000508504 CNNM2Q9H8M5 875 aa20.64■□□□□ 0.9
TRIM60-203ENST00000508504 GPHNQ9NQX3 736 aaPredicted RBP20.64■□□□□ 0.9
TRIM60-203ENST00000508504 TOMM70O94826 608 aa20.64■□□□□ 0.89
TRIM60-203ENST00000508504 PCP11498 1178 aaKnown RBP20.64■□□□□ 0.89
TRIM60-203ENST00000508504 CST9Q5W186 159 aa20.64■□□□□ 0.89
TRIM60-203ENST00000508504 DCAF15Q66K64 600 aa20.64■□□□□ 0.89
TRIM60-203ENST00000508504 ZNF444Q8N0Y2 327 aaPredicted RBP20.64■□□□□ 0.89
TRIM60-203ENST00000508504 KRT23Q9C075 422 aa20.64■□□□□ 0.89
TRIM60-203ENST00000508504 ZSWIM6Q9HCJ5 1215 aa20.64■□□□□ 0.89
TRIM60-203ENST00000508504 IL17RBQ9NRM6 502 aa20.64■□□□□ 0.89
TRIM60-203ENST00000508504 TSPY2A6NKD2 308 aa20.63■□□□□ 0.89
TRIM60-203ENST00000508504 CELF2O95319 508 aaKnown RBP20.63■□□□□ 0.89
TRIM60-203ENST00000508504 ESR2Q92731 530 aa20.63■□□□□ 0.89
TRIM60-203ENST00000508504 ZNF341Q9BYN7 854 aa20.63■□□□□ 0.89
TRIM60-203ENST00000508504 ZNF112Q9UJU3 913 aa20.63■□□□□ 0.89
TRIM60-203ENST00000508504 ANGEL1Q9UNK9 670 aaKnown RBP20.63■□□□□ 0.89
TRIM60-203ENST00000508504 MPHOSPH10O00566 681 aaKnown RBP20.62■□□□□ 0.89
TRIM60-203ENST00000508504 GH2P01242 217 aa20.62■□□□□ 0.89
TRIM60-203ENST00000508504 TSPY3P0CV98 308 aa20.62■□□□□ 0.89
TRIM60-203ENST00000508504 TSPY8P0CW00 308 aa20.62■□□□□ 0.89
TRIM60-203ENST00000508504 GUCY1A2P33402 732 aa20.62■□□□□ 0.89
TRIM60-203ENST00000508504 CAP2P40123 477 aa20.62■□□□□ 0.89
TRIM60-203ENST00000508504 CCDC84Q86UT8 332 aaPredicted RBP20.62■□□□□ 0.89
TRIM60-203ENST00000508504 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.62■□□□□ 0.89
TRIM60-203ENST00000508504 TM6SF1Q9BZW5 370 aa20.62■□□□□ 0.89
TRIM60-203ENST00000508504 ZNF287Q9HBT7 754 aa20.62■□□□□ 0.89
TRIM60-203ENST00000508504 OTOFQ9HC10 1997 aa20.62■□□□□ 0.89
TRIM60-203ENST00000508504 PAPPA2Q9BXP8 1791 aa20.61■□□□□ 0.89
TRIM60-203ENST00000508504 RPS6KB1P23443 525 aa20.61■□□□□ 0.89
TRIM60-203ENST00000508504 NF2P35240 595 aa20.61■□□□□ 0.89
TRIM60-203ENST00000508504 EXOSC10Q01780 885 aaKnown RBP20.61■□□□□ 0.89
TRIM60-203ENST00000508504 ABCB5Q2M3G0 1257 aa20.61■□□□□ 0.89
TRIM60-203ENST00000508504 BLOC1S2Q6QNY1 142 aa20.61■□□□□ 0.89
TRIM60-203ENST00000508504 RUFY3Q7L099 469 aa20.61■□□□□ 0.89
TRIM60-203ENST00000508504 SMC1BQ8NDV3 1235 aa20.61■□□□□ 0.89
TRIM60-203ENST00000508504 HOOK2Q96ED9 719 aa20.61■□□□□ 0.89
TRIM60-203ENST00000508504 SENP2Q9HC62 589 aa20.61■□□□□ 0.89
TRIM60-203ENST00000508504 PASKQ96RG2 1323 aa20.61■□□□□ 0.89
TRIM60-203ENST00000508504 GREB1LQ9C091 1923 aaPredicted RBP20.61■□□□□ 0.89
TRIM60-203ENST00000508504 PRC1O43663 620 aa20.61■□□□□ 0.89
TRIM60-203ENST00000508504 PPP1R12BO60237 982 aaPredicted RBP20.61■□□□□ 0.89
TRIM60-203ENST00000508504 TTLL12Q14166 644 aaPredicted RBP20.61■□□□□ 0.89
TRIM60-203ENST00000508504 SEPT2Q15019 361 aa20.61■□□□□ 0.89
TRIM60-203ENST00000508504 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.61■□□□□ 0.89
TRIM60-203ENST00000508504 DHX32Q7L7V1 743 aaKnown RBP20.61■□□□□ 0.89
TRIM60-203ENST00000508504 RBM46Q8TBY0 533 aaKnown RBP20.61■□□□□ 0.89
TRIM60-203ENST00000508504 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.61■□□□□ 0.89
TRIM60-203ENST00000508504 ATAD5Q96QE3 1844 aa20.6■□□□□ 0.89
TRIM60-203ENST00000508504 UBE2Q2LH0YL09 131 aa20.6■□□□□ 0.89
TRIM60-203ENST00000508504 PSMA5P28066 241 aa20.6■□□□□ 0.89
TRIM60-203ENST00000508504 MCM5P33992 734 aa20.6■□□□□ 0.89
TRIM60-203ENST00000508504 NEK4P51957 841 aa20.6■□□□□ 0.89
TRIM60-203ENST00000508504 NEDD1Q8NHV4 660 aa20.6■□□□□ 0.89
TRIM60-203ENST00000508504 CEP95Q96GE4 821 aa20.6■□□□□ 0.89
TRIM60-203ENST00000508504 CLMNQ96JQ2 1002 aa20.6■□□□□ 0.89
TRIM60-203ENST00000508504 ZBTB21Q9ULJ3 1066 aa20.6■□□□□ 0.89
TRIM60-203ENST00000508504 CYP46A1Q9Y6A2 500 aa20.6■□□□□ 0.89
TRIM60-203ENST00000508504 TRPM7Q96QT4 1865 aa20.59■□□□□ 0.89
TRIM60-203ENST00000508504 IGKV6D-41A0A0C4DH26 115 aa20.59■□□□□ 0.89
TRIM60-203ENST00000508504 CTNND1O60716 968 aaKnown RBP20.59■□□□□ 0.89
TRIM60-203ENST00000508504 VGLL4Q14135 290 aa20.59■□□□□ 0.89
TRIM60-203ENST00000508504 RAB3GAP1Q15042 981 aa20.59■□□□□ 0.89
TRIM60-203ENST00000508504 CCDC17Q96LX7 622 aa20.59■□□□□ 0.89
TRIM60-203ENST00000508504 LARP6Q9BRS8 491 aaKnown RBP20.59■□□□□ 0.89
TRIM60-203ENST00000508504 TAOK2Q9UL54 1235 aa20.59■□□□□ 0.89
TRIM60-203ENST00000508504 RCSD1Q6JBY9 416 aa20.58■□□□□ 0.89
TRIM60-203ENST00000508504 SIAH1Q8IUQ4 282 aa20.58■□□□□ 0.89
TRIM60-203ENST00000508504 ENAHQ8N8S7 591 aaPredicted RBP20.58■□□□□ 0.89
TRIM60-203ENST00000508504 IGDCC4Q8TDY8 1250 aa20.58■□□□□ 0.89
TRIM60-203ENST00000508504 ZSCAN10Q96SZ4 725 aaPredicted RBP20.58■□□□□ 0.89
TRIM60-203ENST00000508504 PLIN4Q96Q06 1357 aa20.58■□□□□ 0.89
TRIM60-203ENST00000508504 TNKSO95271 1327 aa20.58■□□□□ 0.88
TRIM60-203ENST00000508504 CD2BP2O95400 341 aaKnown RBP20.58■□□□□ 0.88
TRIM60-203ENST00000508504 HMGB1P09429 215 aaKnown RBP20.58■□□□□ 0.88
TRIM60-203ENST00000508504 MAP3K11Q16584 847 aa20.58■□□□□ 0.88
TRIM60-203ENST00000508504 CNKSR2Q8WXI2 1034 aa20.58■□□□□ 0.88
TRIM60-203ENST00000508504 TTC14Q96N46 770 aa20.58■□□□□ 0.88
TRIM60-203ENST00000508504 GBA2Q9HCG7 927 aaPredicted RBP20.58■□□□□ 0.88
TRIM60-203ENST00000508504 TSHZ2Q9NRE2 1034 aa20.58■□□□□ 0.88
TRIM60-203ENST00000508504 DOCK1Q14185 1865 aa20.57■□□□□ 0.88
TRIM60-203ENST00000508504 IREB2P48200 963 aaKnown RBP20.57■□□□□ 0.88
TRIM60-203ENST00000508504 MAP3K9P80192 1104 aa20.57■□□□□ 0.88
TRIM60-203ENST00000508504 SEC23AQ15436 765 aa20.57■□□□□ 0.88
TRIM60-203ENST00000508504 Q6ZUG5 572 aa20.57■□□□□ 0.88
TRIM60-203ENST00000508504 TMEM179Q6ZVK1 233 aa20.57■□□□□ 0.88
TRIM60-203ENST00000508504 SNCAIPQ9Y6H5 919 aa20.57■□□□□ 0.88
TRIM60-203ENST00000508504 IFIT3O14879 490 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms