RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 GPAT2Q6NUI2 795 aa23.9■■□□□ 1.42
SFXN1-209ENST00000508290 GIMAP6Q6P9H5 292 aa23.9■■□□□ 1.42
SFXN1-209ENST00000508290 GADL1Q6ZQY3 521 aa23.9■■□□□ 1.42
SFXN1-209ENST00000508290 MYH1P12882 1939 aa23.89■■□□□ 1.42
SFXN1-209ENST00000508290 GABPAQ06546 454 aa23.89■■□□□ 1.41
SFXN1-209ENST00000508290 CERKLQ49MI3 558 aaPredicted RBP23.89■■□□□ 1.41
SFXN1-209ENST00000508290 OTUD7AQ8TE49 926 aaPredicted RBP23.89■■□□□ 1.41
SFXN1-209ENST00000508290 PUS7LQ9H0K6 701 aaKnown RBP23.89■■□□□ 1.41
SFXN1-209ENST00000508290 CABP5Q9NP86 173 aa23.89■■□□□ 1.41
SFXN1-209ENST00000508290 SLC4A4Q9Y6R1 1079 aa23.89■■□□□ 1.41
SFXN1-209ENST00000508290 NAV1Q8NEY1 1877 aa23.89■■□□□ 1.41
SFXN1-209ENST00000508290 MYH7P12883 1935 aa23.88■■□□□ 1.41
SFXN1-209ENST00000508290 PLCD1P51178 756 aa23.88■■□□□ 1.41
SFXN1-209ENST00000508290 PDE1AP54750 535 aa23.88■■□□□ 1.41
SFXN1-209ENST00000508290 BACE1P56817 501 aa23.88■■□□□ 1.41
SFXN1-209ENST00000508290 C17orf99Q6UX52 265 aa23.88■■□□□ 1.41
SFXN1-209ENST00000508290 FSD1Q9BTV5 496 aa23.88■■□□□ 1.41
SFXN1-209ENST00000508290 EFCC1Q9HA90 598 aa23.88■■□□□ 1.41
SFXN1-209ENST00000508290 ARPP21Q9UBL0 812 aaPredicted RBP23.88■■□□□ 1.41
SFXN1-209ENST00000508290 TRIM17Q9Y577 477 aa23.88■■□□□ 1.41
SFXN1-209ENST00000508290 ABCB5Q2M3G0 1257 aa23.87■■□□□ 1.41
SFXN1-209ENST00000508290 SLC4A8Q2Y0W8 1093 aa23.87■■□□□ 1.41
SFXN1-209ENST00000508290 OTOP1Q7RTM1 612 aa23.87■■□□□ 1.41
SFXN1-209ENST00000508290 CD99L2Q8TCZ2 262 aa23.87■■□□□ 1.41
SFXN1-209ENST00000508290 EVI5LQ96CN4 794 aa23.87■■□□□ 1.41
SFXN1-209ENST00000508290 STRBPQ96SI9 672 aaKnown RBP23.87■■□□□ 1.41
SFXN1-209ENST00000508290 TMOD4Q9NZQ9 345 aa23.87■■□□□ 1.41
SFXN1-209ENST00000508290 PHIPQ8WWQ0 1821 aa23.87■■□□□ 1.41
SFXN1-209ENST00000508290 ADGRA2Q96PE1 1338 aa23.86■■□□□ 1.41
SFXN1-209ENST00000508290 USP17L10C9JJH3 530 aa23.86■■□□□ 1.41
SFXN1-209ENST00000508290 CAPN15O75808 1086 aa23.86■■□□□ 1.41
SFXN1-209ENST00000508290 GDF11O95390 407 aa23.86■■□□□ 1.41
SFXN1-209ENST00000508290 GH2P01242 217 aa23.86■■□□□ 1.41
SFXN1-209ENST00000508290 LACTBP83111 547 aaPredicted RBP23.86■■□□□ 1.41
SFXN1-209ENST00000508290 NUCB1Q02818 461 aa23.86■■□□□ 1.41
SFXN1-209ENST00000508290 CHD1LQ86WJ1 897 aa23.86■■□□□ 1.41
SFXN1-209ENST00000508290 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.86■■□□□ 1.41
SFXN1-209ENST00000508290 ATAD5Q96QE3 1844 aa23.86■■□□□ 1.41
SFXN1-209ENST00000508290 PRKAB2O43741 272 aa23.85■■□□□ 1.41
SFXN1-209ENST00000508290 SHMT1P34896 483 aa23.85■■□□□ 1.41
SFXN1-209ENST00000508290 HMGCS2P54868 508 aa23.85■■□□□ 1.41
SFXN1-209ENST00000508290 PRMT2P55345 433 aa23.85■■□□□ 1.41
SFXN1-209ENST00000508290 SLFNL1Q499Z3 407 aa23.85■■□□□ 1.41
SFXN1-209ENST00000508290 C12orf60Q5U649 245 aa23.85■■□□□ 1.41
SFXN1-209ENST00000508290 CCDC84Q86UT8 332 aaPredicted RBP23.85■■□□□ 1.41
SFXN1-209ENST00000508290 SMCR8Q8TEV9 937 aaPredicted RBP23.85■■□□□ 1.41
SFXN1-209ENST00000508290 CCDC85CA6NKD9 419 aa23.84■■□□□ 1.41
SFXN1-209ENST00000508290 GPAA1O43292 621 aa23.84■■□□□ 1.41
SFXN1-209ENST00000508290 OSBPP22059 807 aa23.84■■□□□ 1.41
SFXN1-209ENST00000508290 USP14P54578 494 aa23.84■■□□□ 1.41
SFXN1-209ENST00000508290 MTMR2Q13614 643 aa23.84■■□□□ 1.41
SFXN1-209ENST00000508290 OSBP2Q969R2 916 aa23.84■■□□□ 1.41
SFXN1-209ENST00000508290 CCDC17Q96LX7 622 aa23.84■■□□□ 1.41
SFXN1-209ENST00000508290 LNPKQ9C0E8 428 aa23.84■■□□□ 1.41
SFXN1-209ENST00000508290 HPS5Q9UPZ3 1129 aa23.84■■□□□ 1.41
SFXN1-209ENST00000508290 USP17L12C9JPN9 530 aa23.83■■□□□ 1.41
SFXN1-209ENST00000508290 USP17L21D6R901 530 aa23.83■■□□□ 1.41
SFXN1-209ENST00000508290 IGHDP01880 384 aa23.83■■□□□ 1.41
SFXN1-209ENST00000508290 GCLCP48506 637 aaPredicted RBP23.83■■□□□ 1.41
SFXN1-209ENST00000508290 SBK1Q52WX2 424 aa23.83■■□□□ 1.41
SFXN1-209ENST00000508290 NACAP1Q9BZK3 213 aa23.83■■□□□ 1.41
SFXN1-209ENST00000508290 LOC285556D6RIA3 1793 aa23.83■■□□□ 1.4
SFXN1-209ENST00000508290 PTPRFP10586 1907 aa23.82■■□□□ 1.4
SFXN1-209ENST00000508290 CHGBP05060 677 aa23.82■■□□□ 1.4
SFXN1-209ENST00000508290 CYP2C8P10632 490 aa23.82■■□□□ 1.4
SFXN1-209ENST00000508290 BCRP11274 1271 aa23.82■■□□□ 1.4
SFXN1-209ENST00000508290 HOXD10P28358 340 aa23.82■■□□□ 1.4
SFXN1-209ENST00000508290 HOXA7P31268 230 aaPredicted RBP23.82■■□□□ 1.4
SFXN1-209ENST00000508290 JAG1P78504 1218 aa23.82■■□□□ 1.4
SFXN1-209ENST00000508290 USP17L2Q6R6M4 530 aa23.82■■□□□ 1.4
SFXN1-209ENST00000508290 TMEM179Q6ZVK1 233 aa23.82■■□□□ 1.4
SFXN1-209ENST00000508290 OSBPL3Q9H4L5 887 aa23.82■■□□□ 1.4
SFXN1-209ENST00000508290 CPA4Q9UI42 421 aa23.82■■□□□ 1.4
SFXN1-209ENST00000508290 PTPN22Q9Y2R2 807 aa23.82■■□□□ 1.4
SFXN1-209ENST00000508290 RAB3GAP1Q15042 981 aa23.81■■□□□ 1.4
SFXN1-209ENST00000508290 ZMYM1Q5SVZ6 1142 aa23.81■■□□□ 1.4
SFXN1-209ENST00000508290 TREML2Q5T2D2 321 aa23.81■■□□□ 1.4
SFXN1-209ENST00000508290 C16orf86Q6ZW13 317 aa23.81■■□□□ 1.4
SFXN1-209ENST00000508290 C12orf42Q96LP6 360 aa23.81■■□□□ 1.4
SFXN1-209ENST00000508290 FEZ1Q99689 392 aa23.81■■□□□ 1.4
SFXN1-209ENST00000508290 KIAA1683Q9H0B3 1180 aa23.81■■□□□ 1.4
SFXN1-209ENST00000508290 ZNF287Q9HBT7 754 aa23.81■■□□□ 1.4
SFXN1-209ENST00000508290 GSG1L2A8MUP6 293 aa23.8■■□□□ 1.4
SFXN1-209ENST00000508290 B4GALNT3Q6L9W6 998 aa23.8■■□□□ 1.4
SFXN1-209ENST00000508290 CTR9Q6PD62 1173 aa23.8■■□□□ 1.4
SFXN1-209ENST00000508290 GTF3C2Q8WUA4 911 aaPredicted RBP23.8■■□□□ 1.4
SFXN1-209ENST00000508290 PATL2C9JE40 543 aaKnown RBP23.79■■□□□ 1.4
SFXN1-209ENST00000508290 CYP2D6P10635 497 aa23.79■■□□□ 1.4
SFXN1-209ENST00000508290 IRX3P78415 501 aaPredicted RBP23.79■■□□□ 1.4
SFXN1-209ENST00000508290 SH2D4AQ9H788 454 aa23.79■■□□□ 1.4
SFXN1-209ENST00000508290 ROBO3Q96MS0 1386 aa23.78■■□□□ 1.4
SFXN1-209ENST00000508290 MPHOSPH10O00566 681 aaKnown RBP23.78■■□□□ 1.4
SFXN1-209ENST00000508290 TDO2P48775 406 aa23.78■■□□□ 1.4
SFXN1-209ENST00000508290 FCGRTP55899 365 aa23.78■■□□□ 1.4
SFXN1-209ENST00000508290 FAM110CQ1W6H9 321 aa23.78■■□□□ 1.4
SFXN1-209ENST00000508290 M0R2C6 588 aa23.77■■□□□ 1.4
SFXN1-209ENST00000508290 APPP05067 770 aa23.77■■□□□ 1.4
SFXN1-209ENST00000508290 PSMC4P43686 418 aa23.77■■□□□ 1.4
SFXN1-209ENST00000508290 CDK8P49336 464 aa23.77■■□□□ 1.4
SFXN1-209ENST00000508290 SHROOM1Q2M3G4 852 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms