RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SHROOM1Q2M3G4 852 aaPredicted RBP16.77■□□□□ 0.28
RNF4-208ENST00000507247 FAM47AQ5JRC9 791 aa16.77■□□□□ 0.28
RNF4-208ENST00000507247 RALYLQ86SE5 291 aaKnown RBP16.77■□□□□ 0.28
RNF4-208ENST00000507247 TSHZ2Q9NRE2 1034 aa16.77■□□□□ 0.28
RNF4-208ENST00000507247 TAOK2Q9UL54 1235 aa16.77■□□□□ 0.28
RNF4-208ENST00000507247 RANBP6O60518 1105 aaKnown RBP16.76■□□□□ 0.27
RNF4-208ENST00000507247 AKR1B1P15121 316 aa16.76■□□□□ 0.27
RNF4-208ENST00000507247 RPS6KB1P23443 525 aa16.76■□□□□ 0.27
RNF4-208ENST00000507247 APLP1P51693 650 aa16.76■□□□□ 0.27
RNF4-208ENST00000507247 SUPT20HL1Q3ZLR7 823 aa16.76■□□□□ 0.27
RNF4-208ENST00000507247 CHADLQ6NUI6 762 aa16.76■□□□□ 0.27
RNF4-208ENST00000507247 BLOC1S2Q6QNY1 142 aa16.76■□□□□ 0.27
RNF4-208ENST00000507247 CHST3Q7LGC8 479 aa16.76■□□□□ 0.27
RNF4-208ENST00000507247 DNAJC5GQ8N7S2 189 aa16.76■□□□□ 0.27
RNF4-208ENST00000507247 ESR2Q92731 530 aa16.76■□□□□ 0.27
RNF4-208ENST00000507247 TCEANC2Q96MN5 208 aa16.76■□□□□ 0.27
RNF4-208ENST00000507247 ZNF287Q9HBT7 754 aa16.76■□□□□ 0.27
RNF4-208ENST00000507247 ZSWIM5Q9P217 1185 aa16.76■□□□□ 0.27
RNF4-208ENST00000507247 PHF20L1A8MW92 1017 aa16.75■□□□□ 0.27
RNF4-208ENST00000507247 GDF11O95390 407 aa16.75■□□□□ 0.27
RNF4-208ENST00000507247 JAG1P78504 1218 aa16.75■□□□□ 0.27
RNF4-208ENST00000507247 EXOSC10Q01780 885 aaKnown RBP16.75■□□□□ 0.27
RNF4-208ENST00000507247 CERKLQ49MI3 558 aaPredicted RBP16.75■□□□□ 0.27
RNF4-208ENST00000507247 DCAF15Q66K64 600 aa16.75■□□□□ 0.27
RNF4-208ENST00000507247 RUFY3Q7L099 469 aa16.75■□□□□ 0.27
RNF4-208ENST00000507247 ZNF444Q8N0Y2 327 aaPredicted RBP16.75■□□□□ 0.27
RNF4-208ENST00000507247 HOOK2Q96ED9 719 aa16.75■□□□□ 0.27
RNF4-208ENST00000507247 PLIN4Q96Q06 1357 aa16.75■□□□□ 0.27
RNF4-208ENST00000507247 TSPY2A6NKD2 308 aa16.74■□□□□ 0.27
RNF4-208ENST00000507247 ITGBL1O95965 494 aaPredicted RBP16.74■□□□□ 0.27
RNF4-208ENST00000507247 HMGB1P09429 215 aaKnown RBP16.74■□□□□ 0.27
RNF4-208ENST00000507247 MCM5P33992 734 aa16.74■□□□□ 0.27
RNF4-208ENST00000507247 TFAP4Q01664 338 aa16.74■□□□□ 0.27
RNF4-208ENST00000507247 FSTL1Q12841 308 aa16.74■□□□□ 0.27
RNF4-208ENST00000507247 PRKG1Q13976 671 aa16.74■□□□□ 0.27
RNF4-208ENST00000507247 RABEP1Q15276 862 aa16.74■□□□□ 0.27
RNF4-208ENST00000507247 DHX32Q7L7V1 743 aaKnown RBP16.74■□□□□ 0.27
RNF4-208ENST00000507247 TTC14Q96N46 770 aa16.74■□□□□ 0.27
RNF4-208ENST00000507247 ZKSCAN3Q9BRR0 538 aa16.74■□□□□ 0.27
RNF4-208ENST00000507247 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.74■□□□□ 0.27
RNF4-208ENST00000507247 ZNF341Q9BYN7 854 aa16.74■□□□□ 0.27
RNF4-208ENST00000507247 LRRC2Q9BYS8 371 aa16.74■□□□□ 0.27
RNF4-208ENST00000507247 ZNF112Q9UJU3 913 aa16.74■□□□□ 0.27
RNF4-208ENST00000507247 CYP46A1Q9Y6A2 500 aa16.74■□□□□ 0.27
RNF4-208ENST00000507247 MYH4Q9Y623 1939 aa16.74■□□□□ 0.27
RNF4-208ENST00000507247 PRC1O43663 620 aa16.73■□□□□ 0.27
RNF4-208ENST00000507247 NMT2O60551 498 aa16.73■□□□□ 0.27
RNF4-208ENST00000507247 USP2O75604 605 aaPredicted RBP16.73■□□□□ 0.27
RNF4-208ENST00000507247 TSPY3P0CV98 308 aa16.73■□□□□ 0.27
RNF4-208ENST00000507247 TSPY8P0CW00 308 aa16.73■□□□□ 0.27
RNF4-208ENST00000507247 INPP5BP32019 993 aa16.73■□□□□ 0.27
RNF4-208ENST00000507247 NEDD1Q8NHV4 660 aa16.73■□□□□ 0.27
RNF4-208ENST00000507247 KLRG1Q96E93 195 aa16.73■□□□□ 0.27
RNF4-208ENST00000507247 CCDC17Q96LX7 622 aa16.73■□□□□ 0.27
RNF4-208ENST00000507247 IL17RBQ9NRM6 502 aa16.73■□□□□ 0.27
RNF4-208ENST00000507247 PHIPQ8WWQ0 1821 aa16.73■□□□□ 0.27
RNF4-208ENST00000507247 WDR19Q8NEZ3 1342 aa16.72■□□□□ 0.27
RNF4-208ENST00000507247 IGKV6D-41A0A0C4DH26 115 aa16.72■□□□□ 0.27
RNF4-208ENST00000507247 GUCY1A2P33402 732 aa16.72■□□□□ 0.27
RNF4-208ENST00000507247 NF2P35240 595 aa16.72■□□□□ 0.27
RNF4-208ENST00000507247 CAP2P40123 477 aa16.72■□□□□ 0.27
RNF4-208ENST00000507247 NEK4P51957 841 aa16.72■□□□□ 0.27
RNF4-208ENST00000507247 ABCB5Q2M3G0 1257 aa16.72■□□□□ 0.27
RNF4-208ENST00000507247 CLEC10AQ8IUN9 316 aa16.72■□□□□ 0.27
RNF4-208ENST00000507247 GPHNQ9NQX3 736 aaPredicted RBP16.72■□□□□ 0.27
RNF4-208ENST00000507247 PDRG1Q9NUG6 133 aa16.72■□□□□ 0.27
RNF4-208ENST00000507247 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.72■□□□□ 0.27
RNF4-208ENST00000507247 MPHOSPH10O00566 681 aaKnown RBP16.71■□□□□ 0.27
RNF4-208ENST00000507247 CD2BP2O95400 341 aaKnown RBP16.71■□□□□ 0.27
RNF4-208ENST00000507247 GH2P01242 217 aa16.71■□□□□ 0.27
RNF4-208ENST00000507247 NT5C2P49902 561 aa16.71■□□□□ 0.27
RNF4-208ENST00000507247 SEC23AQ15436 765 aa16.71■□□□□ 0.27
RNF4-208ENST00000507247 Q6ZUG5 572 aa16.71■□□□□ 0.27
RNF4-208ENST00000507247 MOB2Q70IA6 237 aa16.71■□□□□ 0.27
RNF4-208ENST00000507247 SMC1BQ8NDV3 1235 aa16.71■□□□□ 0.27
RNF4-208ENST00000507247 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.71■□□□□ 0.27
RNF4-208ENST00000507247 IGDCC4Q8TDY8 1250 aa16.71■□□□□ 0.27
RNF4-208ENST00000507247 WRNIP1Q96S55 665 aa16.71■□□□□ 0.27
RNF4-208ENST00000507247 ZNF408Q9H9D4 720 aa16.71■□□□□ 0.27
RNF4-208ENST00000507247 SENP2Q9HC62 589 aa16.71■□□□□ 0.27
RNF4-208ENST00000507247 TCP11L1Q9NUJ3 509 aa16.71■□□□□ 0.27
RNF4-208ENST00000507247 ZBTB21Q9ULJ3 1066 aa16.71■□□□□ 0.27
RNF4-208ENST00000507247 TNKSO95271 1327 aa16.7■□□□□ 0.26
RNF4-208ENST00000507247 SH2B2O14492 632 aaPredicted RBP16.7■□□□□ 0.26
RNF4-208ENST00000507247 CTNND1O60716 968 aaKnown RBP16.7■□□□□ 0.26
RNF4-208ENST00000507247 TOB2Q14106 344 aaPredicted RBP16.7■□□□□ 0.26
RNF4-208ENST00000507247 SEPT2Q15019 361 aa16.7■□□□□ 0.26
RNF4-208ENST00000507247 MAP3K11Q16584 847 aa16.7■□□□□ 0.26
RNF4-208ENST00000507247 RCSD1Q6JBY9 416 aa16.7■□□□□ 0.26
RNF4-208ENST00000507247 TMEM179Q6ZVK1 233 aa16.7■□□□□ 0.26
RNF4-208ENST00000507247 IQCA1Q86XH1 822 aa16.7■□□□□ 0.26
RNF4-208ENST00000507247 ENAHQ8N8S7 591 aaPredicted RBP16.7■□□□□ 0.26
RNF4-208ENST00000507247 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
RNF4-208ENST00000507247 CEP95Q96GE4 821 aa16.7■□□□□ 0.26
RNF4-208ENST00000507247 TMEM87BQ96K49 555 aa16.7■□□□□ 0.26
RNF4-208ENST00000507247 ZSCAN10Q96SZ4 725 aaPredicted RBP16.7■□□□□ 0.26
RNF4-208ENST00000507247 AGXT2Q9BYV1 514 aa16.7■□□□□ 0.26
RNF4-208ENST00000507247 ANGEL1Q9UNK9 670 aaKnown RBP16.7■□□□□ 0.26
RNF4-208ENST00000507247 PASKQ96RG2 1323 aa16.7■□□□□ 0.26
RNF4-208ENST00000507247 IFIT3O14879 490 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms