RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 APBA2Q99767 749 aa9.14□□□□□ -0.95
VCAN-207ENST00000507162 PAGR1Q9BTK6 254 aa9.14□□□□□ -0.95
VCAN-207ENST00000507162 PUS3Q9BZE2 481 aaKnown RBP9.14□□□□□ -0.95
VCAN-207ENST00000507162 PORCNQ9H237 461 aa9.14□□□□□ -0.95
VCAN-207ENST00000507162 TMEM39AQ9NV64 488 aa9.14□□□□□ -0.95
VCAN-207ENST00000507162 XIRP2A4UGR9 3374 aa9.14□□□□□ -0.95
VCAN-207ENST00000507162 PTPRZ1P23471 2315 aaPredicted RBP9.14□□□□□ -0.95
VCAN-207ENST00000507162 REV3LO60673 3130 aa9.13□□□□□ -0.95
VCAN-207ENST00000507162 CLTBP09497 229 aa9.13□□□□□ -0.95
VCAN-207ENST00000507162 CYP2C19P33261 490 aa9.13□□□□□ -0.95
VCAN-207ENST00000507162 MAP2K5Q13163 448 aa9.13□□□□□ -0.95
VCAN-207ENST00000507162 G2E3Q7L622 706 aa9.13□□□□□ -0.95
VCAN-207ENST00000507162 SH3BP5LQ7L8J4 393 aa9.13□□□□□ -0.95
VCAN-207ENST00000507162 FBXL18Q96ME1 805 aa9.13□□□□□ -0.95
VCAN-207ENST00000507162 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.13□□□□□ -0.95
VCAN-207ENST00000507162 STK31Q9BXU1 1019 aa9.13□□□□□ -0.95
VCAN-207ENST00000507162 CHMP4AQ9BY43 222 aa9.13□□□□□ -0.95
VCAN-207ENST00000507162 NKX2-4Q9H2Z4 354 aa9.13□□□□□ -0.95
VCAN-207ENST00000507162 SLC28A3Q9HAS3 691 aa9.13□□□□□ -0.95
VCAN-207ENST00000507162 RBPJLQ9UBG7 517 aa9.13□□□□□ -0.95
VCAN-207ENST00000507162 SUGT1Q9Y2Z0 365 aa9.13□□□□□ -0.95
VCAN-207ENST00000507162 CHD7Q9P2D1 2997 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 MYBBP1AQ9BQG0 1328 aaKnown RBP9.12□□□□□ -0.95
VCAN-207ENST00000507162 SPTBN4Q9H254 2564 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 DDTLA6NHG4 134 aaPredicted RBP9.12□□□□□ -0.95
VCAN-207ENST00000507162 PRR33A8MZF0 331 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 PI4K2BG5E9Z4 385 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 ERC2O15083 957 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 TLL1O43897 1013 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 PQBP1O60828 265 aaKnown RBP9.12□□□□□ -0.95
VCAN-207ENST00000507162 HERVK_113P62684 666 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 ERVK-9P63128 1117 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 ERVK-24P63145 666 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 CSPP1Q1MSJ5 1256 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 EPHA10Q5JZY3 1008 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 TRPV1Q8NER1 839 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 TMOD4Q9NZQ9 345 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 WDFY4Q6ZS81 3184 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 LTBP2Q14767 1821 aa9.12□□□□□ -0.95
VCAN-207ENST00000507162 UTYO14607 1347 aa9.11□□□□□ -0.95
VCAN-207ENST00000507162 PRRC2BQ5JSZ5 2229 aaKnown RBP9.11□□□□□ -0.95
VCAN-207ENST00000507162 FAM196BA6NMK8 535 aa9.11□□□□□ -0.95
VCAN-207ENST00000507162 KIAA0355O15063 1070 aa9.11□□□□□ -0.95
VCAN-207ENST00000507162 ENTPD3O75355 529 aa9.11□□□□□ -0.95
VCAN-207ENST00000507162 GLRX3O76003 335 aaKnown RBP9.11□□□□□ -0.95
VCAN-207ENST00000507162 MAP3K10Q02779 954 aa9.11□□□□□ -0.95
VCAN-207ENST00000507162 PICALMQ13492 652 aa9.11□□□□□ -0.95
VCAN-207ENST00000507162 SNX17Q15036 470 aa9.11□□□□□ -0.95
VCAN-207ENST00000507162 RAB30Q15771 203 aa9.11□□□□□ -0.95
VCAN-207ENST00000507162 TSPYL6Q8N831 410 aa9.11□□□□□ -0.95
VCAN-207ENST00000507162 SLC44A5Q8NCS7 719 aa9.11□□□□□ -0.95
VCAN-207ENST00000507162 WDR66Q8TBY9 1149 aa9.11□□□□□ -0.95
VCAN-207ENST00000507162 HERVK_113Q902F9 699 aa9.11□□□□□ -0.95
VCAN-207ENST00000507162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.11□□□□□ -0.95
VCAN-207ENST00000507162 PLXNB2O15031 1838 aa9.1□□□□□ -0.95
VCAN-207ENST00000507162 CFAP54Q96N23 3096 aa9.1□□□□□ -0.95
VCAN-207ENST00000507162 ZFHX2Q9C0A1 2572 aaPredicted RBP9.1□□□□□ -0.95
VCAN-207ENST00000507162 USP17L5A8MUK1 530 aa9.1□□□□□ -0.95
VCAN-207ENST00000507162 ACRP10323 421 aa9.1□□□□□ -0.95
VCAN-207ENST00000507162 GNAI1P63096 354 aa9.1□□□□□ -0.95
VCAN-207ENST00000507162 LRRC41Q15345 812 aa9.1□□□□□ -0.95
VCAN-207ENST00000507162 METTL24Q5JXM2 366 aa9.1□□□□□ -0.95
VCAN-207ENST00000507162 TMEM240Q5SV17 173 aa9.1□□□□□ -0.95
VCAN-207ENST00000507162 LINS1Q8NG48 757 aa9.1□□□□□ -0.95
VCAN-207ENST00000507162 NPLOC4Q8TAT6 608 aa9.1□□□□□ -0.95
VCAN-207ENST00000507162 DNAAF4Q8WXU2 420 aa9.1□□□□□ -0.95
VCAN-207ENST00000507162 ATRNL1Q5VV63 1379 aa9.1□□□□□ -0.95
VCAN-207ENST00000507162 MAST2Q6P0Q8 1798 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 APBB1O00213 710 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 LDHBP07195 334 aaKnown RBP9.09□□□□□ -0.95
VCAN-207ENST00000507162 ZNF853P0CG23 659 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 PRDX5P30044 214 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 HOXA7P31268 230 aaPredicted RBP9.09□□□□□ -0.95
VCAN-207ENST00000507162 FKBP5Q13451 457 aaPredicted RBP9.09□□□□□ -0.95
VCAN-207ENST00000507162 MTMR2Q13614 643 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 SH3D19Q5HYK7 790 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 PRAMEF19Q5SWL8 479 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 C1orf53Q5VUE5 145 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 CCDC174Q6PII3 467 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 C16orf59Q7L2K0 433 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 RUNDC1Q96C34 613 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 IDI2Q9BXS1 227 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 OSBPL5Q9H0X9 879 aaPredicted RBP9.09□□□□□ -0.95
VCAN-207ENST00000507162 AS3MTQ9HBK9 375 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 CD320Q9NPF0 282 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 COG5Q9UP83 839 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 IVNS1ABPQ9Y6Y0 642 aa9.09□□□□□ -0.95
VCAN-207ENST00000507162 PLXNA1Q9UIW2 1896 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 MROH5Q6ZUA9 1318 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 SLC15A5A6NIM6 579 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 DCDC2CA8MYV0 355 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 RFXAPO00287 272 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 GTPBP6O43824 516 aaPredicted RBP9.08□□□□□ -0.96
VCAN-207ENST00000507162 TIMP1P01033 207 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 CYBAP13498 195 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 PTPREP23469 700 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 CCNA1P78396 465 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 FOXK2Q01167 660 aa9.08□□□□□ -0.96
VCAN-207ENST00000507162 PPIGQ13427 754 aaKnown RBP eCLIP9.08□□□□□ -0.96
VCAN-207ENST00000507162 ZNF365Q70YC5 407 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms