RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 CHGBP05060 677 aa15.81■□□□□ 0.12
TCOF1-209ENST00000506630 GRK4P32298 578 aa15.81■□□□□ 0.12
TCOF1-209ENST00000506630 UBE3CQ15386 1083 aa15.81■□□□□ 0.12
TCOF1-209ENST00000506630 ANKRD23Q86SG2 305 aa15.81■□□□□ 0.12
TCOF1-209ENST00000506630 CHD1LQ86WJ1 897 aa15.81■□□□□ 0.12
TCOF1-209ENST00000506630 LCORLQ8N3X6 602 aa15.81■□□□□ 0.12
TCOF1-209ENST00000506630 TRIM47Q96LD4 638 aa15.81■□□□□ 0.12
TCOF1-209ENST00000506630 TRIM34Q9BYJ4 488 aa15.81■□□□□ 0.12
TCOF1-209ENST00000506630 CRNKL1Q9BZJ0 848 aaKnown RBP15.81■□□□□ 0.12
TCOF1-209ENST00000506630 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.81■□□□□ 0.12
TCOF1-209ENST00000506630 BIN2Q9UBW5 565 aaPredicted RBP15.81■□□□□ 0.12
TCOF1-209ENST00000506630 ZNF112Q9UJU3 913 aa15.81■□□□□ 0.12
TCOF1-209ENST00000506630 PALD1Q9ULE6 856 aa15.81■□□□□ 0.12
TCOF1-209ENST00000506630 PDHXO00330 501 aa15.8■□□□□ 0.12
TCOF1-209ENST00000506630 MBD4O95243 580 aa15.8■□□□□ 0.12
TCOF1-209ENST00000506630 HLA-DOAP06340 250 aa15.8■□□□□ 0.12
TCOF1-209ENST00000506630 GJB1P08034 283 aa15.8■□□□□ 0.12
TCOF1-209ENST00000506630 PDE1AP54750 535 aa15.8■□□□□ 0.12
TCOF1-209ENST00000506630 NUCB1Q02818 461 aa15.8■□□□□ 0.12
TCOF1-209ENST00000506630 SHISA4Q96DD7 197 aa15.8■□□□□ 0.12
TCOF1-209ENST00000506630 FSD1Q9BTV5 496 aa15.8■□□□□ 0.12
TCOF1-209ENST00000506630 DHX36Q9H2U1 1008 aaKnown RBP15.8■□□□□ 0.12
TCOF1-209ENST00000506630 ARMT1Q9H993 441 aa15.8■□□□□ 0.12
TCOF1-209ENST00000506630 RBM27Q9P2N5 1060 aaKnown RBP15.8■□□□□ 0.12
TCOF1-209ENST00000506630 PI4KBQ9UBF8 816 aa15.8■□□□□ 0.12
TCOF1-209ENST00000506630 NR2E3Q9Y5X4 410 aa15.8■□□□□ 0.12
TCOF1-209ENST00000506630 PHF20L1A8MW92 1017 aa15.79■□□□□ 0.12
TCOF1-209ENST00000506630 OSBPP22059 807 aa15.79■□□□□ 0.12
TCOF1-209ENST00000506630 HOXD11P31277 338 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-209ENST00000506630 GJA8P48165 433 aa15.79■□□□□ 0.12
TCOF1-209ENST00000506630 UBXN2AP68543 259 aa15.79■□□□□ 0.12
TCOF1-209ENST00000506630 MOGSQ13724 837 aa15.79■□□□□ 0.12
TCOF1-209ENST00000506630 NOL9Q5SY16 702 aaKnown RBP15.79■□□□□ 0.12
TCOF1-209ENST00000506630 CCDC84Q86UT8 332 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-209ENST00000506630 SDR42E1Q8WUS8 393 aa15.79■□□□□ 0.12
TCOF1-209ENST00000506630 RNF208Q9H0X6 261 aa15.79■□□□□ 0.12
TCOF1-209ENST00000506630 STAP2Q9UGK3 403 aa15.79■□□□□ 0.12
TCOF1-209ENST00000506630 TRIOBPQ9H2D6 2365 aa15.78■□□□□ 0.12
TCOF1-209ENST00000506630 MYPNQ86TC9 1320 aa15.78■□□□□ 0.12
TCOF1-209ENST00000506630 RNF113AO15541 343 aaKnown RBP15.78■□□□□ 0.12
TCOF1-209ENST00000506630 TBC1D12O60347 775 aa15.78■□□□□ 0.12
TCOF1-209ENST00000506630 ZFYP08048 801 aaPredicted RBP15.78■□□□□ 0.12
TCOF1-209ENST00000506630 CCL5P13501 91 aa15.78■□□□□ 0.12
TCOF1-209ENST00000506630 MAP3K10Q02779 954 aa15.78■□□□□ 0.12
TCOF1-209ENST00000506630 LRRFIP1Q32MZ4 808 aaKnown RBP15.78■□□□□ 0.12
TCOF1-209ENST00000506630 SCYL3Q8IZE3 742 aa15.78■□□□□ 0.12
TCOF1-209ENST00000506630 CRACR2BQ8N4Y2 399 aaPredicted RBP15.78■□□□□ 0.12
TCOF1-209ENST00000506630 PICK1Q9NRD5 415 aa15.78■□□□□ 0.12
TCOF1-209ENST00000506630 HERC5Q9UII4 1024 aaKnown RBP15.78■□□□□ 0.12
TCOF1-209ENST00000506630 CEP290O15078 2479 aa15.77■□□□□ 0.12
TCOF1-209ENST00000506630 CTGFP29279 349 aa15.77■□□□□ 0.12
TCOF1-209ENST00000506630 RRP1BQ14684 758 aaKnown RBP15.77■□□□□ 0.12
TCOF1-209ENST00000506630 APPBP2Q92624 585 aa15.77■□□□□ 0.12
TCOF1-209ENST00000506630 PARK7Q99497 189 aaKnown RBP15.77■□□□□ 0.12
TCOF1-209ENST00000506630 PUS7LQ9H0K6 701 aaKnown RBP15.77■□□□□ 0.12
TCOF1-209ENST00000506630 MCM9Q9NXL9 1143 aa15.77■□□□□ 0.12
TCOF1-209ENST00000506630 KCNH4Q9UQ05 1017 aa15.77■□□□□ 0.12
TCOF1-209ENST00000506630 PRKAB2O43741 272 aa15.76■□□□□ 0.11
TCOF1-209ENST00000506630 CTNND1O60716 968 aaKnown RBP15.76■□□□□ 0.11
TCOF1-209ENST00000506630 POLR3DP05423 398 aaPredicted RBP15.76■□□□□ 0.11
TCOF1-209ENST00000506630 FCGRTP55899 365 aa15.76■□□□□ 0.11
TCOF1-209ENST00000506630 DNAJC18Q9H819 358 aa15.76■□□□□ 0.11
TCOF1-209ENST00000506630 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
TCOF1-209ENST00000506630 LOC285556D6RIA3 1793 aa15.75■□□□□ 0.11
TCOF1-209ENST00000506630 UBE2Q1Q7Z7E8 422 aa15.75■□□□□ 0.11
TCOF1-209ENST00000506630 TTC6Q86TZ1 520 aa15.75■□□□□ 0.11
TCOF1-209ENST00000506630 FOXP4Q8IVH2 680 aaPredicted RBP15.75■□□□□ 0.11
TCOF1-209ENST00000506630 PLEKHM2Q8IWE5 1019 aa15.75■□□□□ 0.11
TCOF1-209ENST00000506630 SLAIN1Q8ND83 568 aa15.75■□□□□ 0.11
TCOF1-209ENST00000506630 U2AF1L4Q8WU68 220 aaKnown RBP15.75■□□□□ 0.11
TCOF1-209ENST00000506630 OSBP2Q969R2 916 aa15.75■□□□□ 0.11
TCOF1-209ENST00000506630 EVI5LQ96CN4 794 aa15.75■□□□□ 0.11
TCOF1-209ENST00000506630 DCP1AQ9NPI6 582 aaPredicted RBP15.75■□□□□ 0.11
TCOF1-209ENST00000506630 SLC4A4Q9Y6R1 1079 aa15.75■□□□□ 0.11
TCOF1-209ENST00000506630 ADGRA2Q96PE1 1338 aa15.74■□□□□ 0.11
TCOF1-209ENST00000506630 TRIM6-TRIM34B2RNG4 842 aa15.74■□□□□ 0.11
TCOF1-209ENST00000506630 M0R2C6 588 aa15.74■□□□□ 0.11
TCOF1-209ENST00000506630 FARP2O94887 1054 aaPredicted RBP15.74■□□□□ 0.11
TCOF1-209ENST00000506630 PTPRAP18433 802 aa15.74■□□□□ 0.11
TCOF1-209ENST00000506630 PRKCZQ05513 592 aa15.74■□□□□ 0.11
TCOF1-209ENST00000506630 GPAT2Q6NUI2 795 aa15.74■□□□□ 0.11
TCOF1-209ENST00000506630 SLC17A8Q8NDX2 589 aa15.74■□□□□ 0.11
TCOF1-209ENST00000506630 DDRGK1Q96HY6 314 aa15.74■□□□□ 0.11
TCOF1-209ENST00000506630 EHD4Q9H223 541 aa15.74■□□□□ 0.11
TCOF1-209ENST00000506630 ATP8A2Q9NTI2 1148 aa15.74■□□□□ 0.11
TCOF1-209ENST00000506630 SERPINB13Q9UIV8 391 aa15.74■□□□□ 0.11
TCOF1-209ENST00000506630 A0A1W2PPC1 479 aa15.73■□□□□ 0.11
TCOF1-209ENST00000506630 CXCL11O14625 94 aa15.73■□□□□ 0.11
TCOF1-209ENST00000506630 GPAA1O43292 621 aa15.73■□□□□ 0.11
TCOF1-209ENST00000506630 GDF11O95390 407 aa15.73■□□□□ 0.11
TCOF1-209ENST00000506630 SGPL1O95470 568 aa15.73■□□□□ 0.11
TCOF1-209ENST00000506630 CAPN2P17655 700 aa15.73■□□□□ 0.11
TCOF1-209ENST00000506630 CAP2P40123 477 aa15.73■□□□□ 0.11
TCOF1-209ENST00000506630 PLCD1P51178 756 aa15.73■□□□□ 0.11
TCOF1-209ENST00000506630 SHROOM1Q2M3G4 852 aaPredicted RBP15.73■□□□□ 0.11
TCOF1-209ENST00000506630 METTL16Q86W50 562 aaKnown RBP15.73■□□□□ 0.11
TCOF1-209ENST00000506630 AMOTL1Q8IY63 956 aa15.73■□□□□ 0.11
TCOF1-209ENST00000506630 RILPL2Q969X0 211 aa15.73■□□□□ 0.11
TCOF1-209ENST00000506630 ZHX2Q9Y6X8 837 aa15.73■□□□□ 0.11
TCOF1-209ENST00000506630 DLL1O00548 723 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms