RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 TRIM66O15016 1216 aa13.33□□□□□ -0.28
ITGA3-208ENST00000506437 IMMTQ16891 758 aaKnown RBP13.33□□□□□ -0.28
ITGA3-208ENST00000506437 FAM47AQ5JRC9 791 aa13.33□□□□□ -0.28
ITGA3-208ENST00000506437 CTR9Q6PD62 1173 aa13.33□□□□□ -0.28
ITGA3-208ENST00000506437 DDX41Q9UJV9 622 aaKnown RBP13.33□□□□□ -0.28
ITGA3-208ENST00000506437 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
ITGA3-208ENST00000506437 RXRAP19793 462 aa13.33□□□□□ -0.28
ITGA3-208ENST00000506437 FOXD4L5Q5VV16 416 aaPredicted RBP13.33□□□□□ -0.28
ITGA3-208ENST00000506437 ZSCAN29Q8IWY8 852 aaPredicted RBP13.33□□□□□ -0.28
ITGA3-208ENST00000506437 FOXD4L4Q8WXT5 416 aaPredicted RBP13.33□□□□□ -0.28
ITGA3-208ENST00000506437 CRNKL1Q9BZJ0 848 aaKnown RBP13.33□□□□□ -0.28
ITGA3-208ENST00000506437 YY1AP1Q9H869 796 aa13.33□□□□□ -0.28
ITGA3-208ENST00000506437 DHX16O60231 1041 aaKnown RBP13.32□□□□□ -0.28
ITGA3-208ENST00000506437 NMT2O60551 498 aa13.32□□□□□ -0.28
ITGA3-208ENST00000506437 LARGE1O95461 756 aa13.32□□□□□ -0.28
ITGA3-208ENST00000506437 MICALL2Q8IY33 904 aa13.32□□□□□ -0.28
ITGA3-208ENST00000506437 OGFOD1Q8N543 542 aa13.32□□□□□ -0.28
ITGA3-208ENST00000506437 BAG3O95817 575 aa13.32□□□□□ -0.28
ITGA3-208ENST00000506437 VIL1P09327 827 aaKnown RBP13.32□□□□□ -0.28
ITGA3-208ENST00000506437 EPS15P42566 896 aa13.32□□□□□ -0.28
ITGA3-208ENST00000506437 NOP2P46087 812 aaKnown RBP13.32□□□□□ -0.28
ITGA3-208ENST00000506437 AK2P54819 239 aa13.32□□□□□ -0.28
ITGA3-208ENST00000506437 NECAB1Q8N987 351 aa13.32□□□□□ -0.28
ITGA3-208ENST00000506437 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
ITGA3-208ENST00000506437 RFX7Q2KHR2 1363 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 GPR75-ASB3A0A0A6YYF3 556 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 POLR3DP05423 398 aaPredicted RBP13.31□□□□□ -0.28
ITGA3-208ENST00000506437 LMNB1P20700 586 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 KCNA4P22459 653 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 EIF6P56537 245 aaKnown RBP13.31□□□□□ -0.28
ITGA3-208ENST00000506437 TPRNQ4KMQ1 711 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 NEK1Q96PY6 1258 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 WDHD1O75717 1129 aaPredicted RBP13.31□□□□□ -0.28
ITGA3-208ENST00000506437 PPARAQ07869 468 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 RNF20Q5VTR2 975 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 CLEC10AQ8IUN9 316 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 CCDC144CPQ8IYA2 1237 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 CNOT7Q9UIV1 285 aaKnown RBP13.31□□□□□ -0.28
ITGA3-208ENST00000506437 FLT1P17948 1338 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 PDS5AQ29RF7 1337 aaKnown RBP13.31□□□□□ -0.28
ITGA3-208ENST00000506437 RANBP6O60518 1105 aaKnown RBP13.31□□□□□ -0.28
ITGA3-208ENST00000506437 GSTO1P78417 241 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 BLOC1S2Q6QNY1 142 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 CYB5R4Q7L1T6 521 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 C10orf67Q8IYJ2 551 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 MYL10Q9BUA6 226 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 NACAP1Q9BZK3 213 aa13.31□□□□□ -0.28
ITGA3-208ENST00000506437 LDHCP07864 332 aa13.3□□□□□ -0.28
ITGA3-208ENST00000506437 PDRG1Q9NUG6 133 aa13.3□□□□□ -0.28
ITGA3-208ENST00000506437 USP25Q9UHP3 1055 aa13.3□□□□□ -0.28
ITGA3-208ENST00000506437 DLGAP5Q15398 846 aa13.3□□□□□ -0.28
ITGA3-208ENST00000506437 LRSAM1Q6UWE0 723 aa13.3□□□□□ -0.28
ITGA3-208ENST00000506437 Q6ZUG5 572 aa13.3□□□□□ -0.28
ITGA3-208ENST00000506437 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.3□□□□□ -0.28
ITGA3-208ENST00000506437 BAZ2BQ9UIF8 2168 aaKnown RBP13.3□□□□□ -0.28
ITGA3-208ENST00000506437 DDTLA6NHG4 134 aaPredicted RBP13.29□□□□□ -0.28
ITGA3-208ENST00000506437 PTMSP20962 102 aa13.29□□□□□ -0.28
ITGA3-208ENST00000506437 DNAJC21Q5F1R6 531 aaKnown RBP13.29□□□□□ -0.28
ITGA3-208ENST00000506437 MIGA2Q7L4E1 593 aa13.29□□□□□ -0.28
ITGA3-208ENST00000506437 TRPM4Q8TD43 1214 aa13.29□□□□□ -0.28
ITGA3-208ENST00000506437 BRF1Q92994 677 aa13.29□□□□□ -0.28
ITGA3-208ENST00000506437 GMLQ99445 158 aa13.29□□□□□ -0.28
ITGA3-208ENST00000506437 CYP46A1Q9Y6A2 500 aa13.29□□□□□ -0.28
ITGA3-208ENST00000506437 FZD9O00144 591 aa13.29□□□□□ -0.28
ITGA3-208ENST00000506437 WNT10BO00744 389 aa13.29□□□□□ -0.28
ITGA3-208ENST00000506437 PLCB2Q00722 1185 aa13.29□□□□□ -0.28
ITGA3-208ENST00000506437 APOBRQ0VD83 1088 aa13.29□□□□□ -0.28
ITGA3-208ENST00000506437 TMEM39BQ9GZU3 492 aa13.29□□□□□ -0.28
ITGA3-208ENST00000506437 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.29□□□□□ -0.28
ITGA3-208ENST00000506437 V9GYY5 206 aaPredicted RBP13.29□□□□□ -0.28
ITGA3-208ENST00000506437 GAKO14976 1311 aa13.29□□□□□ -0.28
ITGA3-208ENST00000506437 RABEP1Q15276 862 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 RUFY3Q7L099 469 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 KIF18AQ8NI77 898 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 CNKSR2Q8WXI2 1034 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 EFCC1Q9HA90 598 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 MYOZ2Q9NPC6 264 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 ZSWIM5Q9P217 1185 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 CCT2P78371 535 aaKnown RBP13.28□□□□□ -0.28
ITGA3-208ENST00000506437 PRKG1Q13976 671 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 SART3Q15020 963 aaKnown RBP13.28□□□□□ -0.28
ITGA3-208ENST00000506437 MFSD6Q6ZSS7 791 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 RASGRP2Q7LDG7 609 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 RALYLQ86SE5 291 aaKnown RBP13.28□□□□□ -0.28
ITGA3-208ENST00000506437 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 PYCARDQ9ULZ3 195 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 FOSBP53539 338 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 ANTXR2P58335 489 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 LCMT1Q9UIC8 334 aa13.28□□□□□ -0.28
ITGA3-208ENST00000506437 SBF1O95248 1867 aa13.27□□□□□ -0.28
ITGA3-208ENST00000506437 SPDYE2BA6NHP3 402 aa13.27□□□□□ -0.28
ITGA3-208ENST00000506437 CTIFO43310 598 aaKnown RBP13.27□□□□□ -0.28
ITGA3-208ENST00000506437 SPDYE6P0CI01 402 aa13.27□□□□□ -0.28
ITGA3-208ENST00000506437 ZDHHC15Q96MV8 337 aa13.27□□□□□ -0.28
ITGA3-208ENST00000506437 NCOA5Q9HCD5 579 aaKnown RBP13.27□□□□□ -0.28
ITGA3-208ENST00000506437 ZSWIM6Q9HCJ5 1215 aa13.27□□□□□ -0.28
ITGA3-208ENST00000506437 TPCN1Q9ULQ1 816 aa13.27□□□□□ -0.28
ITGA3-208ENST00000506437 PRC1O43663 620 aa13.27□□□□□ -0.29
ITGA3-208ENST00000506437 RPS6KB1P23443 525 aa13.27□□□□□ -0.29
ITGA3-208ENST00000506437 SH3BP5LQ7L8J4 393 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms