RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 SIL1Q9H173 461 aa7.11□□□□□ -1.27
SCLT1-207ENST00000506233 MAST3O60307 1309 aa7.1□□□□□ -1.27
SCLT1-207ENST00000506233 FZD6O60353 706 aa7.1□□□□□ -1.27
SCLT1-207ENST00000506233 IL6STP40189 918 aaPredicted RBP7.1□□□□□ -1.27
SCLT1-207ENST00000506233 TBX4P57082 545 aa7.1□□□□□ -1.27
SCLT1-207ENST00000506233 LYPD8Q6UX82 237 aa7.1□□□□□ -1.27
SCLT1-207ENST00000506233 HPS5Q9UPZ3 1129 aa7.1□□□□□ -1.27
SCLT1-207ENST00000506233 PCDHGA11Q9Y5H2 935 aa7.1□□□□□ -1.27
SCLT1-207ENST00000506233 NID2Q14112 1375 aa7.1□□□□□ -1.27
SCLT1-207ENST00000506233 PSMD2Q13200 908 aa7.1□□□□□ -1.27
SCLT1-207ENST00000506233 SERINC3Q13530 473 aa7.1□□□□□ -1.27
SCLT1-207ENST00000506233 FAM182BQ5T319 152 aa7.1□□□□□ -1.27
SCLT1-207ENST00000506233 POTEDQ86YR6 584 aa7.1□□□□□ -1.27
SCLT1-207ENST00000506233 PARP14Q460N5 1801 aa7.1□□□□□ -1.27
SCLT1-207ENST00000506233 PUS10Q3MIT2 529 aaKnown RBP7.09□□□□□ -1.27
SCLT1-207ENST00000506233 ZMYM1Q5SVZ6 1142 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 FMNL3Q8IVF7 1028 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 PUS7LQ9H0K6 701 aaKnown RBP7.09□□□□□ -1.27
SCLT1-207ENST00000506233 SENP2Q9HC62 589 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 SEC31BQ9NQW1 1179 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 SLX4Q8IY92 1834 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 CNTNAP4Q9C0A0 1308 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 MYH6P13533 1939 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 NPR3P17342 541 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 OXLD1Q5BKU9 147 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 SWT1Q5T5J6 900 aaKnown RBP7.09□□□□□ -1.27
SCLT1-207ENST00000506233 CCDC181Q5TID7 509 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 CHMP4BQ9H444 224 aaKnown RBP7.09□□□□□ -1.27
SCLT1-207ENST00000506233 PIH1D3Q9NQM4 214 aaKnown RBP7.09□□□□□ -1.27
SCLT1-207ENST00000506233 LOC102724428A0A0B4J2F2 783 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 AP5Z1O43299 807 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 FDPSP14324 419 aaKnown RBP7.09□□□□□ -1.27
SCLT1-207ENST00000506233 SIK1P57059 783 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 AACSQ86V21 672 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 SPOCK3Q9BQ16 436 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 EPB41L4AQ9HCS5 686 aaPredicted RBP7.09□□□□□ -1.27
SCLT1-207ENST00000506233 PCDHB9Q9Y5E1 797 aa7.09□□□□□ -1.27
SCLT1-207ENST00000506233 EYA2O00167 538 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 ADAMTS3O15072 1205 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 BAG4O95429 457 aaKnown RBP7.08□□□□□ -1.28
SCLT1-207ENST00000506233 PAX3P23760 479 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 CTSWP56202 376 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 CREB3L3Q68CJ9 461 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 CWC27Q6UX04 472 aaKnown RBP7.08□□□□□ -1.28
SCLT1-207ENST00000506233 MORC4Q8TE76 937 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 TM6SF1Q9BZW5 370 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 PRDM10Q9NQV6 1147 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 CWC25Q9NXE8 425 aaPredicted RBP7.08□□□□□ -1.28
SCLT1-207ENST00000506233 TTF2Q9UNY4 1162 aaKnown RBP7.08□□□□□ -1.28
SCLT1-207ENST00000506233 LOC285556D6RIA3 1793 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 POTEFA5A3E0 1075 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 ATMINO43313 823 aaPredicted RBP7.08□□□□□ -1.28
SCLT1-207ENST00000506233 STAU1O95793 577 aaKnown RBP7.08□□□□□ -1.28
SCLT1-207ENST00000506233 RABEP1Q15276 862 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 RNF19BQ6ZMZ0 732 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 PANK2Q9BZ23 570 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 UPF3BQ9BZI7 483 aaKnown RBP7.08□□□□□ -1.28
SCLT1-207ENST00000506233 PRKD2Q9BZL6 878 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 GADD45BO75293 160 aaPredicted RBP7.08□□□□□ -1.28
SCLT1-207ENST00000506233 XRCC6P12956 609 aaKnown RBP eCLIP7.08□□□□□ -1.28
SCLT1-207ENST00000506233 TBC1D9BQ66K14 1250 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 CHRDL2Q6WN34 429 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 ATCAYQ86WG3 371 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 ACSBG1Q96GR2 724 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 BOLA2Q9H3K6 86 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 TMOD3Q9NYL9 352 aa7.08□□□□□ -1.28
SCLT1-207ENST00000506233 A0A1B0GUL7 405 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 UBE2Q2LH0YL09 131 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 MZF1P28698 734 aaPredicted RBP7.07□□□□□ -1.28
SCLT1-207ENST00000506233 TRIM6-TRIM34B2RNG4 842 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 HMMRO75330 724 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 GLRX3O76003 335 aaKnown RBP7.07□□□□□ -1.28
SCLT1-207ENST00000506233 HSPA1LP34931 641 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 GRIK5Q16478 980 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 SLC10A5Q5PT55 438 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 TEX2Q8IWB9 1127 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 FAM126AQ9BYI3 521 aaPredicted RBP7.07□□□□□ -1.28
SCLT1-207ENST00000506233 INCENPQ9NQS7 918 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 ZBTB39O15060 712 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 ATF4P18848 351 aaPredicted RBP7.07□□□□□ -1.28
SCLT1-207ENST00000506233 IBSPP21815 317 aaPredicted RBP7.07□□□□□ -1.28
SCLT1-207ENST00000506233 TTLL5Q6EMB2 1281 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 USP48Q86UV5 1035 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 TXNRD3Q86VQ6 643 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 RETREG3Q86VR2 466 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 TMEM63CQ9P1W3 806 aa7.07□□□□□ -1.28
SCLT1-207ENST00000506233 RBM8AQ9Y5S9 174 aaKnown RBP7.07□□□□□ -1.28
SCLT1-207ENST00000506233 MYH1P12882 1939 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 KLRG2A4D1S0 409 aaPredicted RBP7.06□□□□□ -1.28
SCLT1-207ENST00000506233 ADAMTS2O95450 1211 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 XRCC5P13010 732 aaKnown RBP7.06□□□□□ -1.28
SCLT1-207ENST00000506233 PLCG2P16885 1265 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 KBTBD3Q8NAB2 608 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 SMARCC2Q8TAQ2 1214 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 JDP2Q8WYK2 163 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 INTS4Q96HW7 963 aaKnown RBP7.06□□□□□ -1.28
SCLT1-207ENST00000506233 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.06□□□□□ -1.28
SCLT1-207ENST00000506233 IER2Q9BTL4 223 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 ENPP3O14638 875 aa7.06□□□□□ -1.28
SCLT1-207ENST00000506233 TNFRSF10BO14763 440 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms