RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SLC6A19Q695T7 634 aa6.47□□□□□ -1.37
TOPBP1-204ENST00000505804 CCDC81Q6ZN84 652 aa6.47□□□□□ -1.37
TOPBP1-204ENST00000505804 PSMG3-AS1Q96PY0 264 aa6.47□□□□□ -1.37
TOPBP1-204ENST00000505804 DPH2Q9BQC3 489 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-204ENST00000505804 PRKAG2Q9UGJ0 569 aa6.47□□□□□ -1.37
TOPBP1-204ENST00000505804 KLHL3Q9UH77 587 aa6.47□□□□□ -1.37
TOPBP1-204ENST00000505804 ADMP35318 185 aa6.46□□□□□ -1.38
TOPBP1-204ENST00000505804 PRAMEF13Q5VWM6 474 aa6.46□□□□□ -1.38
TOPBP1-204ENST00000505804 RNF43Q68DV7 783 aa6.46□□□□□ -1.38
TOPBP1-204ENST00000505804 MRPL41Q8IXM3 137 aaKnown RBP6.46□□□□□ -1.38
TOPBP1-204ENST00000505804 FBXL6Q8N531 539 aa6.46□□□□□ -1.38
TOPBP1-204ENST00000505804 FAM13CQ8NE31 585 aa6.46□□□□□ -1.38
TOPBP1-204ENST00000505804 XAGE3Q8WTP9 111 aa6.46□□□□□ -1.38
TOPBP1-204ENST00000505804 CPLX3Q8WVH0 158 aa6.46□□□□□ -1.38
TOPBP1-204ENST00000505804 MFSD14AQ96MC6 490 aa6.46□□□□□ -1.38
TOPBP1-204ENST00000505804 TBC1D32Q96NH3 1257 aa6.46□□□□□ -1.38
TOPBP1-204ENST00000505804 FOXQ1Q9C009 403 aa6.46□□□□□ -1.38
TOPBP1-204ENST00000505804 DYRK3O43781 588 aa6.45□□□□□ -1.38
TOPBP1-204ENST00000505804 CST3P01034 146 aaPredicted RBP6.45□□□□□ -1.38
TOPBP1-204ENST00000505804 CAP2P40123 477 aa6.45□□□□□ -1.38
TOPBP1-204ENST00000505804 NFIAQ12857 509 aa6.45□□□□□ -1.38
TOPBP1-204ENST00000505804 MLECQ14165 292 aa6.45□□□□□ -1.38
TOPBP1-204ENST00000505804 ARMCX6Q7L4S7 300 aa6.45□□□□□ -1.38
TOPBP1-204ENST00000505804 GMLQ99445 158 aa6.45□□□□□ -1.38
TOPBP1-204ENST00000505804 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.45□□□□□ -1.387e-12■□□□□ 8.3
TOPBP1-204ENST00000505804 SRRTQ9BXP5 876 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-204ENST00000505804 ZNRF3Q9ULT6 936 aa6.45□□□□□ -1.38
TOPBP1-204ENST00000505804 LEFTY1O75610 366 aa6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 LRIG2O94898 1065 aa6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 FSTP19883 344 aa6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 YARSP54577 528 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 LRRFIP1Q32MZ4 808 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 ARSHQ5FYA8 562 aa6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 ZAR1Q86SH2 424 aa6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 MCF2L2Q86YR7 1114 aa6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 RIN3Q8TB24 985 aa6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 GATA6Q92908 595 aa6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 ATG4CQ96DT6 458 aa6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 CRBNQ96SW2 442 aa6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 GMIPQ9P107 970 aa6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 MRVI1Q9Y6F6 885 aa6.44□□□□□ -1.38
TOPBP1-204ENST00000505804 WDR64B1ANS9 1081 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 SLITRK5O94991 958 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 IGLV1-40P01703 118 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 F13BP05160 661 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 SSBP05455 408 aaKnown RBP eCLIP6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 FGRP09769 529 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 FAM87AP0C7U9 286 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 IMPDH2P12268 514 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 EIF6P56537 245 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 OVOS1Q6IE37 1185 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 OGFOD3Q6PK18 319 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 RUFY4Q6ZNE9 571 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 SLFN12Q8IYM2 578 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 TOP6BLQ8N6T0 577 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 MFSD2AQ8NA29 543 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 GIMAP7Q8NHV1 300 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 DUSP23Q9BVJ7 150 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 TANGO6Q9C0B7 1094 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 SEMA6BQ9H3T3 888 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 PRDM10Q9NQV6 1147 aa6.43□□□□□ -1.38
TOPBP1-204ENST00000505804 FAM170BA6NMN3 283 aa6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 RBAK-RBAKDNI3L0D1 243 aa6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 GIPRP48546 466 aa6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 CDCP2Q5VXM1 449 aa6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 PHACTR4Q8IZ21 702 aa6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 RBBP8NLQ8NC74 664 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 SHKBP1Q8TBC3 707 aa6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 TMEM40Q8WWA1 233 aa6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 ANAPC16Q96DE5 110 aa6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 SHDQ96IW2 340 aa6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 KIF2CQ99661 725 aa6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 MIPEPQ99797 713 aa6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 DBNDD2Q9BQY9 259 aa6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 CNNM2Q9H8M5 875 aa6.42□□□□□ -1.38
TOPBP1-204ENST00000505804 MEIS3P2A8K0S8 358 aa6.41□□□□□ -1.38
TOPBP1-204ENST00000505804 NME1P15531 152 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-204ENST00000505804 RAG1P15918 1043 aa6.41□□□□□ -1.38
TOPBP1-204ENST00000505804 ETFBP38117 255 aa6.41□□□□□ -1.38
TOPBP1-204ENST00000505804 LETMD1Q6P1Q0 360 aa6.41□□□□□ -1.38
TOPBP1-204ENST00000505804 ZNF765Q7L2R6 523 aa6.41□□□□□ -1.38
TOPBP1-204ENST00000505804 NLRC3Q7RTR2 1065 aa6.41□□□□□ -1.38
TOPBP1-204ENST00000505804 CDH24Q86UP0 819 aa6.41□□□□□ -1.38
TOPBP1-204ENST00000505804 LSRQ86X29 649 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-204ENST00000505804 BAHD1Q8TBE0 780 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-204ENST00000505804 CCDC74BQ96LY2 380 aa6.41□□□□□ -1.38
TOPBP1-204ENST00000505804 STRIP2Q9ULQ0 834 aa6.41□□□□□ -1.38
TOPBP1-204ENST00000505804 GSC2O15499 205 aa6.4□□□□□ -1.38
TOPBP1-204ENST00000505804 EOMESO95936 686 aa6.4□□□□□ -1.38
TOPBP1-204ENST00000505804 ATP2B1P20020 1258 aa6.4□□□□□ -1.38
TOPBP1-204ENST00000505804 POLR2BP30876 1174 aaKnown RBP6.4□□□□□ -1.38
TOPBP1-204ENST00000505804 GBP1P32455 592 aa6.4□□□□□ -1.38
TOPBP1-204ENST00000505804 PRSS36Q5K4E3 855 aa6.4□□□□□ -1.38
TOPBP1-204ENST00000505804 DUSP27Q5VZP5 1158 aa6.4□□□□□ -1.38
TOPBP1-204ENST00000505804 FAM169BQ8N8A8 192 aa6.4□□□□□ -1.38
TOPBP1-204ENST00000505804 PPP1R13LQ8WUF5 828 aa6.4□□□□□ -1.38
TOPBP1-204ENST00000505804 CYB5D2Q8WUJ1 264 aa6.4□□□□□ -1.38
TOPBP1-204ENST00000505804 SLC9A7Q96T83 725 aa6.4□□□□□ -1.38
TOPBP1-204ENST00000505804 ATG3Q9NT62 314 aa6.4□□□□□ -1.38
TOPBP1-204ENST00000505804 PPP1R1BQ9UD71 204 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms