RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 DBNDD2Q9BQY9 259 aa7.22□□□□□ -1.25
GYPB-205ENST00000505583 CRISPLD2Q9H0B8 497 aa7.22□□□□□ -1.25
GYPB-205ENST00000505583 ASCC2Q9H1I8 757 aaPredicted RBP7.22□□□□□ -1.25
GYPB-205ENST00000505583 RAI14Q9P0K7 980 aa7.22□□□□□ -1.25
GYPB-205ENST00000505583 GJD2Q9UKL4 321 aa7.22□□□□□ -1.25
GYPB-205ENST00000505583 RANBP2P49792 3224 aaKnown RBP7.22□□□□□ -1.25
GYPB-205ENST00000505583 MYH1P12882 1939 aa7.21□□□□□ -1.25
GYPB-205ENST00000505583 GTPBP6O43824 516 aaPredicted RBP7.21□□□□□ -1.26
GYPB-205ENST00000505583 TFRCP02786 760 aaKnown RBP7.21□□□□□ -1.26
GYPB-205ENST00000505583 GNAI2P04899 355 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 CYP2E1P05181 493 aaPredicted RBP7.21□□□□□ -1.26
GYPB-205ENST00000505583 MTMR2Q13614 643 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 FAM110CQ1W6H9 321 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 SH3D19Q5HYK7 790 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 GORABQ5T7V8 394 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 ATF7IPQ6VMQ6 1270 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 TEX11Q8IYF3 940 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 TMEM57Q8N5G2 664 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 PROCA1Q8NCQ7 364 aaPredicted RBP7.21□□□□□ -1.26
GYPB-205ENST00000505583 TGFBRAP1Q8WUH2 860 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 FRAT1Q92837 279 aaPredicted RBP7.21□□□□□ -1.26
GYPB-205ENST00000505583 HTATIP2Q9BUP3 242 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.21□□□□□ -1.26
GYPB-205ENST00000505583 C1orf115Q9H7X2 142 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 TXNRD2Q9NNW7 524 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 AATFQ9NY61 560 aaKnown RBP eCLIP7.21□□□□□ -1.26
GYPB-205ENST00000505583 LRP2BPQ9P2M1 347 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 PCDHB8Q9UN66 801 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 HDAC5Q9UQL6 1122 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 PCDHB13Q9Y5F0 798 aa7.21□□□□□ -1.26
GYPB-205ENST00000505583 FRMPD3Q5JV73 1810 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 USP17L5A8MUK1 530 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 LDHCP07864 332 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 DYNLL1P63167 89 aaKnown RBP7.2□□□□□ -1.26
GYPB-205ENST00000505583 GSTO1P78417 241 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 G3BP1Q13283 466 aaKnown RBP eCLIP7.2□□□□□ -1.26
GYPB-205ENST00000505583 TNNI3KQ59H18 835 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 METTL16Q86W50 562 aaKnown RBP7.2□□□□□ -1.26
GYPB-205ENST00000505583 MAPKAPK5Q8IW41 473 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 TRIB2Q92519 343 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 COA7Q96BR5 231 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 P2RX7Q99572 595 aaKnown RBP7.2□□□□□ -1.26
GYPB-205ENST00000505583 PIH1D3Q9NQM4 214 aaKnown RBP7.2□□□□□ -1.26
GYPB-205ENST00000505583 TLR7Q9NYK1 1049 aaKnown RBP7.2□□□□□ -1.26
GYPB-205ENST00000505583 PI4KBQ9UBF8 816 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 STAP2Q9UGK3 403 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 SAP30BPQ9UHR5 308 aaKnown RBP7.2□□□□□ -1.26
GYPB-205ENST00000505583 PALD1Q9ULE6 856 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 NDUFB9Q9Y6M9 179 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 FPGT-TNNI3KV9GXZ4 949 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 FLT1P17948 1338 aa7.2□□□□□ -1.26
GYPB-205ENST00000505583 EVI5O60447 810 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 GDF11O95390 407 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 MAP4K4O95819 1239 aaPredicted RBP7.19□□□□□ -1.26
GYPB-205ENST00000505583 UQCRFS1P1P0C7P4 283 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 CYP2B6P20813 491 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 ZAP70P43403 619 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 GCLCP48506 637 aaPredicted RBP7.19□□□□□ -1.26
GYPB-205ENST00000505583 BACE1P56817 501 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 PPP4CP60510 307 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 Q3C1V9 767 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 NAA16Q6N069 864 aaPredicted RBP7.19□□□□□ -1.26
GYPB-205ENST00000505583 ZNF467Q7Z7K2 595 aaPredicted RBP7.19□□□□□ -1.26
GYPB-205ENST00000505583 SSH3Q8TE77 659 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 LRCH3Q96II8 777 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 WDR18Q9BV38 432 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 PORCNQ9H237 461 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 EMILIN3Q9NT22 766 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 RBPJLQ9UBG7 517 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 MORF4L1Q9UBU8 362 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 HERC5Q9UII4 1024 aaKnown RBP7.19□□□□□ -1.26
GYPB-205ENST00000505583 DBNLQ9UJU6 430 aaKnown RBP7.19□□□□□ -1.26
GYPB-205ENST00000505583 PNMA3Q9UL41 463 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 NR2E3Q9Y5X4 410 aa7.19□□□□□ -1.26
GYPB-205ENST00000505583 CCER2I3L3R5 266 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 IPO8O15397 1037 aaKnown RBP7.18□□□□□ -1.26
GYPB-205ENST00000505583 SURF6O75683 361 aaKnown RBP7.18□□□□□ -1.26
GYPB-205ENST00000505583 HMGCRP04035 888 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 ASNSP08243 561 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 RLBP1P12271 317 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 SYN1P17600 705 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 HOXA7P31268 230 aaPredicted RBP7.18□□□□□ -1.26
GYPB-205ENST00000505583 HERVK_113P62684 666 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 ATP8B2P98198 1209 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 CCL14Q16627 93 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 TTC39AQ5SRH9 613 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 MAP3K21Q5TCX8 1036 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 NECAB2Q7Z6G3 386 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 FOXP4Q8IVH2 680 aaPredicted RBP7.18□□□□□ -1.26
GYPB-205ENST00000505583 C7orf61Q8IZ16 206 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 MIGA1Q8NAN2 632 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 EAF2Q96CJ1 260 aaPredicted RBP7.18□□□□□ -1.26
GYPB-205ENST00000505583 CCDC8Q9H0W5 538 aaPredicted RBP7.18□□□□□ -1.26
GYPB-205ENST00000505583 DHX36Q9H2U1 1008 aaKnown RBP7.18□□□□□ -1.26
GYPB-205ENST00000505583 ANTXR1Q9H6X2 564 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 AS3MTQ9HBK9 375 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 GPR108Q9NPR9 543 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 ZBTB21Q9ULJ3 1066 aa7.18□□□□□ -1.26
GYPB-205ENST00000505583 ZMYND8Q9ULU4 1186 aaPredicted RBP7.18□□□□□ -1.26
GYPB-205ENST00000505583 PFASO15067 1338 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms