RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 AMOTL1Q8IY63 956 aa25.48■■□□□ 1.67
TRAPPC11-203ENST00000504526 PUS7LQ9H0K6 701 aaKnown RBP25.48■■□□□ 1.67
TRAPPC11-203ENST00000504526 STAP2Q9UGK3 403 aa25.48■■□□□ 1.67
TRAPPC11-203ENST00000504526 ZBTB21Q9ULJ3 1066 aa25.48■■□□□ 1.67
TRAPPC11-203ENST00000504526 ATAD5Q96QE3 1844 aa25.48■■□□□ 1.67
TRAPPC11-203ENST00000504526 CHGBP05060 677 aa25.47■■□□□ 1.67
TRAPPC11-203ENST00000504526 SH3D19Q5HYK7 790 aa25.47■■□□□ 1.67
TRAPPC11-203ENST00000504526 FBXO46Q6PJ61 603 aaPredicted RBP25.47■■□□□ 1.67
TRAPPC11-203ENST00000504526 CD99L2Q8TCZ2 262 aa25.47■■□□□ 1.67
TRAPPC11-203ENST00000504526 AGTPBP1Q9UPW5 1226 aa25.47■■□□□ 1.67
TRAPPC11-203ENST00000504526 TRIM17Q9Y577 477 aa25.47■■□□□ 1.67
TRAPPC11-203ENST00000504526 SLC4A4Q9Y6R1 1079 aa25.47■■□□□ 1.67
TRAPPC11-203ENST00000504526 PRKAB2O43741 272 aa25.46■■□□□ 1.67
TRAPPC11-203ENST00000504526 GABPAQ06546 454 aa25.46■■□□□ 1.67
TRAPPC11-203ENST00000504526 CERKLQ49MI3 558 aaPredicted RBP25.46■■□□□ 1.67
TRAPPC11-203ENST00000504526 C17orf99Q6UX52 265 aa25.46■■□□□ 1.67
TRAPPC11-203ENST00000504526 PDE1AP54750 535 aa25.45■■□□□ 1.66
TRAPPC11-203ENST00000504526 KIF22Q14807 665 aa25.45■■□□□ 1.66
TRAPPC11-203ENST00000504526 OTOP1Q7RTM1 612 aa25.45■■□□□ 1.66
TRAPPC11-203ENST00000504526 STRBPQ96SI9 672 aaKnown RBP25.45■■□□□ 1.66
TRAPPC11-203ENST00000504526 FSD1Q9BTV5 496 aa25.45■■□□□ 1.66
TRAPPC11-203ENST00000504526 EFCC1Q9HA90 598 aa25.45■■□□□ 1.66
TRAPPC11-203ENST00000504526 CABP5Q9NP86 173 aa25.45■■□□□ 1.66
TRAPPC11-203ENST00000504526 SWAP70Q9UH65 585 aa25.45■■□□□ 1.66
TRAPPC11-203ENST00000504526 PNMA3Q9UL41 463 aa25.45■■□□□ 1.66
TRAPPC11-203ENST00000504526 ADGRA2Q96PE1 1338 aa25.44■■□□□ 1.66
TRAPPC11-203ENST00000504526 PTPRFP10586 1907 aa25.44■■□□□ 1.66
TRAPPC11-203ENST00000504526 CCDC85CA6NKD9 419 aa25.44■■□□□ 1.66
TRAPPC11-203ENST00000504526 C19orf81C9J6K1 198 aa25.44■■□□□ 1.66
TRAPPC11-203ENST00000504526 GH2P01242 217 aa25.44■■□□□ 1.66
TRAPPC11-203ENST00000504526 IGHDP01880 384 aa25.44■■□□□ 1.66
TRAPPC11-203ENST00000504526 SHMT1P34896 483 aa25.44■■□□□ 1.66
TRAPPC11-203ENST00000504526 JAG1P78504 1218 aa25.44■■□□□ 1.66
TRAPPC11-203ENST00000504526 PABPC4Q13310 644 aaKnown RBP eCLIP25.44■■□□□ 1.66
TRAPPC11-203ENST00000504526 OSBP2Q969R2 916 aa25.44■■□□□ 1.66
TRAPPC11-203ENST00000504526 LNPKQ9C0E8 428 aa25.44■■□□□ 1.66
TRAPPC11-203ENST00000504526 GNAT2P19087 354 aa25.43■■□□□ 1.66
TRAPPC11-203ENST00000504526 HMGCS2P54868 508 aa25.43■■□□□ 1.66
TRAPPC11-203ENST00000504526 BACE1P56817 501 aa25.43■■□□□ 1.66
TRAPPC11-203ENST00000504526 ABCB5Q2M3G0 1257 aa25.43■■□□□ 1.66
TRAPPC11-203ENST00000504526 GIMAP6Q6P9H5 292 aa25.43■■□□□ 1.66
TRAPPC11-203ENST00000504526 USP17L10C9JJH3 530 aa25.42■■□□□ 1.66
TRAPPC11-203ENST00000504526 CYP2C8P10632 490 aa25.42■■□□□ 1.66
TRAPPC11-203ENST00000504526 LACTBP83111 547 aaPredicted RBP25.42■■□□□ 1.66
TRAPPC11-203ENST00000504526 C12orf60Q5U649 245 aa25.42■■□□□ 1.66
TRAPPC11-203ENST00000504526 B4GALNT3Q6L9W6 998 aa25.42■■□□□ 1.66
TRAPPC11-203ENST00000504526 CHD1LQ86WJ1 897 aa25.42■■□□□ 1.66
TRAPPC11-203ENST00000504526 TMOD4Q9NZQ9 345 aa25.42■■□□□ 1.66
TRAPPC11-203ENST00000504526 CPA4Q9UI42 421 aa25.42■■□□□ 1.66
TRAPPC11-203ENST00000504526 HPS5Q9UPZ3 1129 aa25.42■■□□□ 1.66
TRAPPC11-203ENST00000504526 USP17L12C9JPN9 530 aa25.41■■□□□ 1.66
TRAPPC11-203ENST00000504526 USP17L21D6R901 530 aa25.41■■□□□ 1.66
TRAPPC11-203ENST00000504526 GPAA1O43292 621 aa25.41■■□□□ 1.66
TRAPPC11-203ENST00000504526 GNRH1P01148 92 aa25.41■■□□□ 1.66
TRAPPC11-203ENST00000504526 NUCB1Q02818 461 aa25.41■■□□□ 1.66
TRAPPC11-203ENST00000504526 MTMR2Q13614 643 aa25.41■■□□□ 1.66
TRAPPC11-203ENST00000504526 EVI5LQ96CN4 794 aa25.41■■□□□ 1.66
TRAPPC11-203ENST00000504526 ARPP21Q9UBL0 812 aaPredicted RBP25.41■■□□□ 1.66
TRAPPC11-203ENST00000504526 CYP2D6P10635 497 aa25.4■■□□□ 1.66
TRAPPC11-203ENST00000504526 SHROOM1Q2M3G4 852 aaPredicted RBP25.4■■□□□ 1.66
TRAPPC11-203ENST00000504526 TREML2Q5T2D2 321 aa25.4■■□□□ 1.66
TRAPPC11-203ENST00000504526 TICAM2Q86XR7 235 aa25.4■■□□□ 1.66
TRAPPC11-203ENST00000504526 SMCR8Q8TEV9 937 aaPredicted RBP25.4■■□□□ 1.66
TRAPPC11-203ENST00000504526 LOC285556D6RIA3 1793 aa25.4■■□□□ 1.66
TRAPPC11-203ENST00000504526 BCRP11274 1271 aa25.39■■□□□ 1.66
TRAPPC11-203ENST00000504526 OSBPP22059 807 aa25.39■■□□□ 1.66
TRAPPC11-203ENST00000504526 RAB3GAP1Q15042 981 aa25.39■■□□□ 1.66
TRAPPC11-203ENST00000504526 CTR9Q6PD62 1173 aa25.39■■□□□ 1.66
TRAPPC11-203ENST00000504526 PTPN22Q9Y2R2 807 aa25.39■■□□□ 1.66
TRAPPC11-203ENST00000504526 SBK1Q52WX2 424 aa25.38■■□□□ 1.65
TRAPPC11-203ENST00000504526 ZMYM1Q5SVZ6 1142 aa25.38■■□□□ 1.65
TRAPPC11-203ENST00000504526 USP17L2Q6R6M4 530 aa25.38■■□□□ 1.65
TRAPPC11-203ENST00000504526 CCDC17Q96LX7 622 aa25.38■■□□□ 1.65
TRAPPC11-203ENST00000504526 GSG1L2A8MUP6 293 aa25.37■■□□□ 1.65
TRAPPC11-203ENST00000504526 EVX2Q03828 476 aa25.37■■□□□ 1.65
TRAPPC11-203ENST00000504526 DYNLL2Q96FJ2 89 aa25.37■■□□□ 1.65
TRAPPC11-203ENST00000504526 FEZ1Q99689 392 aa25.37■■□□□ 1.65
TRAPPC11-203ENST00000504526 M0R2C6 588 aa25.36■■□□□ 1.65
TRAPPC11-203ENST00000504526 HOXA7P31268 230 aaPredicted RBP25.36■■□□□ 1.65
TRAPPC11-203ENST00000504526 GCLCP48506 637 aaPredicted RBP25.36■■□□□ 1.65
TRAPPC11-203ENST00000504526 USP14P54578 494 aa25.36■■□□□ 1.65
TRAPPC11-203ENST00000504526 PRMT2P55345 433 aa25.36■■□□□ 1.65
TRAPPC11-203ENST00000504526 IRX6P78412 446 aaPredicted RBP25.36■■□□□ 1.65
TRAPPC11-203ENST00000504526 TMEM179Q6ZVK1 233 aa25.36■■□□□ 1.65
TRAPPC11-203ENST00000504526 C16orf86Q6ZW13 317 aa25.36■■□□□ 1.65
TRAPPC11-203ENST00000504526 SLC44A5Q8NCS7 719 aa25.36■■□□□ 1.65
TRAPPC11-203ENST00000504526 NACAP1Q9BZK3 213 aa25.36■■□□□ 1.65
TRAPPC11-203ENST00000504526 KIAA1683Q9H0B3 1180 aa25.36■■□□□ 1.65
TRAPPC11-203ENST00000504526 OSBPL3Q9H4L5 887 aa25.36■■□□□ 1.65
TRAPPC11-203ENST00000504526 CYP2D7A0A087X1C5 515 aa25.35■■□□□ 1.65
TRAPPC11-203ENST00000504526 PATL2C9JE40 543 aaKnown RBP25.35■■□□□ 1.65
TRAPPC11-203ENST00000504526 MPHOSPH10O00566 681 aaKnown RBP25.35■■□□□ 1.65
TRAPPC11-203ENST00000504526 HOXD10P28358 340 aa25.35■■□□□ 1.65
TRAPPC11-203ENST00000504526 CDK8P49336 464 aa25.35■■□□□ 1.65
TRAPPC11-203ENST00000504526 CAP1Q01518 475 aa25.35■■□□□ 1.65
TRAPPC11-203ENST00000504526 C12orf42Q96LP6 360 aa25.35■■□□□ 1.65
TRAPPC11-203ENST00000504526 ASCC2Q9H1I8 757 aaPredicted RBP25.35■■□□□ 1.65
TRAPPC11-203ENST00000504526 BAZ2AQ9UIF9 1905 aaKnown RBP25.35■■□□□ 1.65
TRAPPC11-203ENST00000504526 APPP05067 770 aa25.34■■□□□ 1.65
TRAPPC11-203ENST00000504526 GUCY1A2P33402 732 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms