RNA–Protein interactions for RNA: ENST00000504309.5

SDHA-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-204ENST00000504309 CERKQ8TCT0 537 aa20.75■□□□□ 0.91
SDHA-204ENST00000504309 FOXP1Q9H334 677 aaPredicted RBP20.75■□□□□ 0.91
SDHA-204ENST00000504309 HPSEQ9Y251 543 aa20.75■□□□□ 0.91
SDHA-204ENST00000504309 GOLGA6L19H0YKK7 550 aa20.74■□□□□ 0.91
SDHA-204ENST00000504309 PLEKHA8P1O95397 391 aa20.74■□□□□ 0.91
SDHA-204ENST00000504309 FBXW7Q969H0 707 aa20.74■□□□□ 0.91
SDHA-204ENST00000504309 CLIC6Q96NY7 704 aa20.74■□□□□ 0.91
SDHA-204ENST00000504309 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.74■□□□□ 0.91
SDHA-204ENST00000504309 LDHBP07195 334 aaKnown RBP20.74■□□□□ 0.91
SDHA-204ENST00000504309 GPSM2P81274 684 aa20.74■□□□□ 0.91
SDHA-204ENST00000504309 GRIK5Q16478 980 aa20.74■□□□□ 0.91
SDHA-204ENST00000504309 SLC4A8Q2Y0W8 1093 aa20.74■□□□□ 0.91
SDHA-204ENST00000504309 SBK1Q52WX2 424 aa20.74■□□□□ 0.91
SDHA-204ENST00000504309 FAM47AQ5JRC9 791 aa20.74■□□□□ 0.91
SDHA-204ENST00000504309 CEP57L1Q8IYX8 460 aa20.74■□□□□ 0.91
SDHA-204ENST00000504309 WDR66Q8TBY9 1149 aa20.74■□□□□ 0.91
SDHA-204ENST00000504309 PIBF1Q8WXW3 757 aa20.74■□□□□ 0.91
SDHA-204ENST00000504309 GOLGA6L6A8MZA4 724 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 SERPINB2P05120 415 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 PKN1Q16512 942 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 ZNF804AQ7Z570 1209 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 OXER1Q8TDS5 423 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 FOCADQ5VW36 1801 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 MYH1P12882 1939 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 SLC3A2P08195 630 aaKnown RBP20.73■□□□□ 0.91
SDHA-204ENST00000504309 USP17L8P0C7I0 530 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 SYKP43405 635 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 ST5P78524 1137 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 DIXDC1Q155Q3 683 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 DPCR1Q3MIW9 517 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 RESP18Q5W5W9 173 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 MCM9Q9NXL9 1143 aa20.73■□□□□ 0.91
SDHA-204ENST00000504309 hCG_1642624A0A1W2PR95 340 aa20.72■□□□□ 0.91
SDHA-204ENST00000504309 DDAH1O94760 285 aa20.72■□□□□ 0.91
SDHA-204ENST00000504309 C15orf52Q6ZUT6 534 aaKnown RBP20.72■□□□□ 0.91
SDHA-204ENST00000504309 C17orf53Q8N3J3 647 aaPredicted RBP20.72■□□□□ 0.91
SDHA-204ENST00000504309 RBM28Q9NW13 759 aaKnown RBP20.72■□□□□ 0.91
SDHA-204ENST00000504309 VPS54Q9P1Q0 977 aa20.72■□□□□ 0.91
SDHA-204ENST00000504309 MKRN1Q9UHC7 482 aaKnown RBP20.72■□□□□ 0.91
SDHA-204ENST00000504309 FAM237AA0A1B0GTK4 181 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 CUTAO60888 179 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 PTGS1P23219 599 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 SLC27A3Q5K4L6 730 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 SARM1Q6SZW1 724 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.71■□□□□ 0.91
SDHA-204ENST00000504309 AOPEPQ8N6M6 819 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 SH3RF3Q8TEJ3 882 aaPredicted RBP20.71■□□□□ 0.91
SDHA-204ENST00000504309 QTRT2Q9H974 415 aaKnown RBP20.71■□□□□ 0.91
SDHA-204ENST00000504309 BECN2A8MW95 431 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 UFL1O94874 794 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 TPM3P06753 285 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 CALM1P0DP23 149 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 CALM2P0DP24 149 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 CALM3P0DP25 149 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 AKAP17AQ02040 695 aaKnown RBP20.71■□□□□ 0.91
SDHA-204ENST00000504309 DDR1Q08345 913 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 RILPL1Q5EBL4 403 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 TIGD1Q96MW7 591 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 CNTNAP5Q8WYK1 1306 aa20.71■□□□□ 0.91
SDHA-204ENST00000504309 PRPF3O43395 683 aaKnown RBP20.7■□□□□ 0.9
SDHA-204ENST00000504309 TRIM37O94972 964 aa20.7■□□□□ 0.9
SDHA-204ENST00000504309 PDE4BQ07343 736 aa20.7■□□□□ 0.9
SDHA-204ENST00000504309 TMTC3Q6ZXV5 915 aa20.7■□□□□ 0.9
SDHA-204ENST00000504309 BIN1O00499 593 aa20.69■□□□□ 0.9
SDHA-204ENST00000504309 KRI1Q8N9T8 703 aaKnown RBP20.69■□□□□ 0.9
SDHA-204ENST00000504309 NAT10Q9H0A0 1025 aaKnown RBP20.69■□□□□ 0.9
SDHA-204ENST00000504309 ANO8Q9HCE9 1232 aaPredicted RBP20.69■□□□□ 0.9
SDHA-204ENST00000504309 NRBP1Q9UHY1 535 aa20.69■□□□□ 0.9
SDHA-204ENST00000504309 PYCARDQ9ULZ3 195 aa20.69■□□□□ 0.9
SDHA-204ENST00000504309 PCDHB6Q9Y5E3 794 aa20.69■□□□□ 0.9
SDHA-204ENST00000504309 TSPY2A6NKD2 308 aa20.69■□□□□ 0.9
SDHA-204ENST00000504309 USP5P45974 858 aa20.69■□□□□ 0.9
SDHA-204ENST00000504309 DRC7Q8IY82 874 aa20.69■□□□□ 0.9
SDHA-204ENST00000504309 PHF20Q9BVI0 1012 aa20.69■□□□□ 0.9
SDHA-204ENST00000504309 V9GY48 417 aaPredicted RBP20.69■□□□□ 0.9
SDHA-204ENST00000504309 ROBO3Q96MS0 1386 aa20.69■□□□□ 0.9
SDHA-204ENST00000504309 FAM205CA6NFA0 338 aa20.68■□□□□ 0.9
SDHA-204ENST00000504309 GRIN1Q05586 938 aa20.68■□□□□ 0.9
SDHA-204ENST00000504309 ZRSR1Q15695 479 aaKnown RBP20.68■□□□□ 0.9
SDHA-204ENST00000504309 C12orf60Q5U649 245 aa20.68■□□□□ 0.9
SDHA-204ENST00000504309 RCSD1Q6JBY9 416 aa20.68■□□□□ 0.9
SDHA-204ENST00000504309 CCDC186Q7Z3E2 898 aa20.68■□□□□ 0.9
SDHA-204ENST00000504309 RBM17Q96I25 401 aaKnown RBP20.68■□□□□ 0.9
SDHA-204ENST00000504309 CD209Q9NNX6 404 aa20.68■□□□□ 0.9
SDHA-204ENST00000504309 CLIP2Q9UDT6 1046 aa20.68■□□□□ 0.9
SDHA-204ENST00000504309 FBXO2Q9UK22 296 aaPredicted RBP20.68■□□□□ 0.9
SDHA-204ENST00000504309 CDC25BP30305 580 aa20.68■□□□□ 0.9
SDHA-204ENST00000504309 GSTO1P78417 241 aa20.68■□□□□ 0.9
SDHA-204ENST00000504309 NOLC1Q14978 699 aaKnown RBP eCLIP20.68■□□□□ 0.92e-8■■■■■ 26.9
SDHA-204ENST00000504309 SPECC1Q5M775 1068 aa20.68■□□□□ 0.9
SDHA-204ENST00000504309 R3HCC1Q9Y3T6 440 aaKnown RBP20.68■□□□□ 0.9
SDHA-204ENST00000504309 POLRMTO00411 1230 aaKnown RBP20.67■□□□□ 0.9
SDHA-204ENST00000504309 IGSF3O75054 1194 aa20.67■□□□□ 0.9
SDHA-204ENST00000504309 XBP1P17861 261 aa20.67■□□□□ 0.9
SDHA-204ENST00000504309 NLRP12P59046 1061 aa20.67■□□□□ 0.9
SDHA-204ENST00000504309 KRT27Q7Z3Y8 459 aa20.67■□□□□ 0.9
SDHA-204ENST00000504309 SRBD1Q8N5C6 995 aaKnown RBP20.67■□□□□ 0.9
SDHA-204ENST00000504309 CTCFLQ8NI51 663 aaPredicted RBP20.67■□□□□ 0.9
SDHA-204ENST00000504309 DYNLL2Q96FJ2 89 aa20.67■□□□□ 0.9
SDHA-204ENST00000504309 BPIFA3Q9BQP9 254 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms