RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 ARMC5Q96C12 935 aa7.53□□□□□ -1.2
TRAPPC13-205ENST00000504243 MFSD14AQ96MC6 490 aa7.53□□□□□ -1.2
TRAPPC13-205ENST00000504243 TBC1D32Q96NH3 1257 aa7.53□□□□□ -1.2
TRAPPC13-205ENST00000504243 ZNF408Q9H9D4 720 aa7.53□□□□□ -1.2
TRAPPC13-205ENST00000504243 ATG3Q9NT62 314 aa7.53□□□□□ -1.2
TRAPPC13-205ENST00000504243 RNF112Q9ULX5 631 aa7.53□□□□□ -1.2
TRAPPC13-205ENST00000504243 SHROOM4Q9ULL8 1493 aa7.52□□□□□ -1.21
TRAPPC13-205ENST00000504243 ETFBP38117 255 aa7.52□□□□□ -1.21
TRAPPC13-205ENST00000504243 PDE4BQ07343 736 aa7.52□□□□□ -1.21
TRAPPC13-205ENST00000504243 CPSF6Q16630 551 aaKnown RBP eCLIP7.52□□□□□ -1.21
TRAPPC13-205ENST00000504243 SEZ6L2Q6UXD5 910 aa7.52□□□□□ -1.21
TRAPPC13-205ENST00000504243 ZAR1Q86SH2 424 aa7.52□□□□□ -1.21
TRAPPC13-205ENST00000504243 REXO1Q8N1G1 1221 aaKnown RBP7.52□□□□□ -1.21
TRAPPC13-205ENST00000504243 SHKBP1Q8TBC3 707 aa7.52□□□□□ -1.21
TRAPPC13-205ENST00000504243 METTL22Q9BUU2 404 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC13-205ENST00000504243 POLR3KQ9Y2Y1 108 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC13-205ENST00000504243 TACC3Q9Y6A5 838 aa7.52□□□□□ -1.21
TRAPPC13-205ENST00000504243 WDR64B1ANS9 1081 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 NEFMP07197 916 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 IMPDH2P12268 514 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 PLCG1P19174 1290 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 CYP27A1Q02318 531 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 ZMYM1Q5SVZ6 1142 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 ZBTB37Q5TC79 503 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 SOGA3Q5TF21 947 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 CDC37L1Q7L3B6 337 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 CYFIP1Q7L576 1253 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 ZDHHC13Q8IUH4 622 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 FBXL6Q8N531 539 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 ZNF507Q8TCN5 953 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 ISL2Q96A47 359 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 OSBPL1AQ9BXW6 950 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 TRIM55Q9BYV6 548 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 CORINQ9Y5Q5 1042 aa7.51□□□□□ -1.21
TRAPPC13-205ENST00000504243 GFRA2O00451 464 aa7.5□□□□□ -1.21
TRAPPC13-205ENST00000504243 U2SURPO15042 1029 aaKnown RBP7.5□□□□□ -1.21
TRAPPC13-205ENST00000504243 F13BP05160 661 aa7.5□□□□□ -1.21
TRAPPC13-205ENST00000504243 PGRP06401 933 aa7.5□□□□□ -1.21
TRAPPC13-205ENST00000504243 GRK4P32298 578 aa7.5□□□□□ -1.21
TRAPPC13-205ENST00000504243 PPP2R5EQ16537 467 aa7.5□□□□□ -1.21
TRAPPC13-205ENST00000504243 DUSP27Q5VZP5 1158 aa7.5□□□□□ -1.21
TRAPPC13-205ENST00000504243 ANKS3Q6ZW76 656 aa7.5□□□□□ -1.21
TRAPPC13-205ENST00000504243 DPH6Q7L8W6 267 aa7.5□□□□□ -1.21
TRAPPC13-205ENST00000504243 LGR6Q9HBX8 967 aa7.5□□□□□ -1.21
TRAPPC13-205ENST00000504243 C1GALT1Q9NS00 363 aa7.5□□□□□ -1.21
TRAPPC13-205ENST00000504243 KLHL3Q9UH77 587 aa7.5□□□□□ -1.21
TRAPPC13-205ENST00000504243 LOC105371045A0A1W2PR82 267 aa7.49□□□□□ -1.21
TRAPPC13-205ENST00000504243 HTR3BO95264 441 aa7.49□□□□□ -1.21
TRAPPC13-205ENST00000504243 GRIK1P39086 918 aa7.49□□□□□ -1.21
TRAPPC13-205ENST00000504243 GATA6Q92908 595 aa7.49□□□□□ -1.21
TRAPPC13-205ENST00000504243 SHDQ96IW2 340 aa7.49□□□□□ -1.21
TRAPPC13-205ENST00000504243 LNPKQ9C0E8 428 aa7.49□□□□□ -1.21
TRAPPC13-205ENST00000504243 WNT10AQ9GZT5 417 aa7.49□□□□□ -1.21
TRAPPC13-205ENST00000504243 REV1Q9UBZ9 1251 aa7.49□□□□□ -1.21
TRAPPC13-205ENST00000504243 SMAD7O15105 426 aaKnown RBP7.48□□□□□ -1.21
TRAPPC13-205ENST00000504243 DYNC1LI2O43237 492 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC13-205ENST00000504243 NTF4P34130 210 aa7.48□□□□□ -1.21
TRAPPC13-205ENST00000504243 ADMP35318 185 aa7.48□□□□□ -1.21
TRAPPC13-205ENST00000504243 RBL2Q08999 1139 aa7.48□□□□□ -1.21
TRAPPC13-205ENST00000504243 LRRFIP1Q32MZ4 808 aaKnown RBP7.48□□□□□ -1.21
TRAPPC13-205ENST00000504243 INTS5Q6P9B9 1019 aaKnown RBP7.48□□□□□ -1.21
TRAPPC13-205ENST00000504243 OGFOD3Q6PK18 319 aa7.48□□□□□ -1.21
TRAPPC13-205ENST00000504243 EHMT1Q9H9B1 1298 aa7.48□□□□□ -1.21
TRAPPC13-205ENST00000504243 PRKAG3Q9UGI9 489 aa7.48□□□□□ -1.21
TRAPPC13-205ENST00000504243 ZNRF3Q9ULT6 936 aa7.48□□□□□ -1.21
TRAPPC13-205ENST00000504243 LEMD3Q9Y2U8 911 aa7.48□□□□□ -1.21
TRAPPC13-205ENST00000504243 PRR19A6NJB7 356 aa7.47□□□□□ -1.21
TRAPPC13-205ENST00000504243 COBLO75128 1261 aa7.47□□□□□ -1.21
TRAPPC13-205ENST00000504243 GIPRP48546 466 aa7.47□□□□□ -1.21
TRAPPC13-205ENST00000504243 CCDC144BQ3MJ40 725 aa7.47□□□□□ -1.21
TRAPPC13-205ENST00000504243 CYP27C1Q4G0S4 372 aa7.47□□□□□ -1.21
TRAPPC13-205ENST00000504243 TNNI3KQ59H18 835 aa7.47□□□□□ -1.21
TRAPPC13-205ENST00000504243 OR6P1Q8NGX9 317 aa7.47□□□□□ -1.21
TRAPPC13-205ENST00000504243 HNRNPLLQ8WVV9 542 aaKnown RBP7.47□□□□□ -1.21
TRAPPC13-205ENST00000504243 ANTXR1Q9H6X2 564 aa7.47□□□□□ -1.21
TRAPPC13-205ENST00000504243 ZSWIM4Q9H7M6 989 aa7.47□□□□□ -1.21
TRAPPC13-205ENST00000504243 PIM2Q9P1W9 311 aa7.47□□□□□ -1.21
TRAPPC13-205ENST00000504243 ATE1O95260 518 aa7.46□□□□□ -1.22
TRAPPC13-205ENST00000504243 TGFB1P01137 390 aa7.46□□□□□ -1.22
TRAPPC13-205ENST00000504243 CDK5R2Q13319 367 aa7.46□□□□□ -1.22
TRAPPC13-205ENST00000504243 LARP1BQ659C4 914 aaKnown RBP7.46□□□□□ -1.22
TRAPPC13-205ENST00000504243 LSRQ86X29 649 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC13-205ENST00000504243 HID1Q8IV36 788 aa7.46□□□□□ -1.22
TRAPPC13-205ENST00000504243 PSMG3-AS1Q96PY0 264 aa7.46□□□□□ -1.22
TRAPPC13-205ENST00000504243 FAM86C2PA6NEL3 165 aa7.45□□□□□ -1.22
TRAPPC13-205ENST00000504243 CCDC85CA6NKD9 419 aa7.45□□□□□ -1.22
TRAPPC13-205ENST00000504243 FAM170BA6NMN3 283 aa7.45□□□□□ -1.22
TRAPPC13-205ENST00000504243 LRIG2O94898 1065 aa7.45□□□□□ -1.22
TRAPPC13-205ENST00000504243 CAP2P40123 477 aa7.45□□□□□ -1.22
TRAPPC13-205ENST00000504243 RUFY4Q6ZNE9 571 aa7.45□□□□□ -1.22
TRAPPC13-205ENST00000504243 FAM169BQ8N8A8 192 aa7.45□□□□□ -1.22
TRAPPC13-205ENST00000504243 FAM13CQ8NE31 585 aa7.45□□□□□ -1.22
TRAPPC13-205ENST00000504243 OSBPL2Q9H1P3 480 aa7.45□□□□□ -1.22
TRAPPC13-205ENST00000504243 ACTR10Q9NZ32 417 aa7.45□□□□□ -1.22
TRAPPC13-205ENST00000504243 GMIPQ9P107 970 aa7.45□□□□□ -1.22
TRAPPC13-205ENST00000504243 SCO2A0A1W2PP80 73 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 CYP26A1O43174 497 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 FAM87AP0C7U9 286 aa7.44□□□□□ -1.22
TRAPPC13-205ENST00000504243 YARSP54577 528 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms