RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 KMT5BQ4FZB7 885 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 CSGALNACT2Q8N6G5 542 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 ZBTB9Q96C00 473 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 MAPK8IP1Q9UQF2 711 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 UTP11Q9Y3A2 253 aaKnown RBP8□□□□□ -1.13
SYNPO2-205ENST00000504178 CFBP00751 764 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 GEN1Q17RS7 908 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 DYMQ7RTS9 669 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 FNBP4Q8N3X1 1017 aaPredicted RBP8□□□□□ -1.13
SYNPO2-205ENST00000504178 BEGAINQ9BUH8 593 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 NACA2Q9H009 215 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 MRPL44Q9H9J2 332 aaKnown RBP8□□□□□ -1.13
SYNPO2-205ENST00000504178 USP40Q9NVE5 1235 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 LRWD1Q9UFC0 647 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 ADGBQ8N7X0 1667 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 CETN3O15182 167 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 CTSWP56202 376 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 SETDB1Q15047 1291 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 DNAJC21Q5F1R6 531 aaKnown RBP8□□□□□ -1.13
SYNPO2-205ENST00000504178 FAM47AQ5JRC9 791 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 GPATCH11Q8N954 259 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 GMNNO75496 209 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 CPLX4Q7Z7G2 160 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 MRRFQ96E11 262 aaKnown RBP8□□□□□ -1.13
SYNPO2-205ENST00000504178 NAPGQ99747 312 aaPredicted RBP8□□□□□ -1.13
SYNPO2-205ENST00000504178 ARPP21Q9UBL0 812 aaPredicted RBP8□□□□□ -1.13
SYNPO2-205ENST00000504178 USTQ9Y2C2 406 aa8□□□□□ -1.13
SYNPO2-205ENST00000504178 CCDC160A6NGH7 325 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 NLRP12P59046 1061 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 ITIH3Q06033 890 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 PPARAQ07869 468 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 NSMFQ6X4W1 530 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 CLSTN2Q9H4D0 955 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 ZKSCAN5Q9Y2L8 839 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 DNAJC10Q8IXB1 793 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 DIS3L2Q8IYB7 885 aaKnown RBP7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 OTUD7AQ8TE49 926 aaPredicted RBP7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 NUP58Q9BVL2 599 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 ARHGEF16Q5VV41 709 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 NELFBQ8WX92 580 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 PHKBQ93100 1093 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 NKIRAS1Q9NYS0 192 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 NDUFB9Q9Y6M9 179 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 CIB2O75838 187 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 DAAM2Q86T65 1068 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 NLRX1Q86UT6 975 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 FAM76AQ8TAV0 307 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 TBC1D22AQ8WUA7 517 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 ZEB2O60315 1214 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 HDXQ7Z353 690 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 NSMCE1Q8WV22 266 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 ZFYVE16Q7Z3T8 1539 aa7.99□□□□□ -1.13
SYNPO2-205ENST00000504178 ARID4AP29374 1257 aaPredicted RBP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 MNAT1P51948 309 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 CLUL1Q15846 466 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 NELFCDQ8IXH7 590 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 KBTBD3Q8NAB2 608 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 TESK2Q96S53 571 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 CARD10Q9BWT7 1032 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 KCNJ14Q9UNX9 436 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 TTF2Q9UNY4 1162 aaKnown RBP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 ABCA5Q8WWZ7 1642 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 H7C1D1 291 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 SORBS3O60504 671 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 XRCC6P12956 609 aaKnown RBP eCLIP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 RNASE9P60153 205 aaKnown RBP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 FAM102BQ5T8I3 360 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 UTP14CQ5TAP6 766 aaKnown RBP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 OTUD6AQ7L8S5 288 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 MIER3Q7Z3K6 550 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 FRMPD2Q68DX3 1309 aaPredicted RBP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 NOL3O60936 208 aaKnown RBP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 CAPN2P17655 700 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 BAG6P46379 1132 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 FYB2Q5VWT5 728 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 OTUD7BQ6GQQ9 843 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 SECISBP2LQ93073 1101 aaKnown RBP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 PFDN4Q9NQP4 134 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 ERVV-2B6SEH9 535 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 EXOC3O60645 756 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 RFX1P22670 979 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 TFAP4Q01664 338 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 RAD51AP2Q09MP3 1159 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 GABPB2Q8TAK5 448 aaPredicted RBP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 SMCR8Q8TEV9 937 aaPredicted RBP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 IPO4Q8TEX9 1081 aaKnown RBP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 PAGR1Q9BTK6 254 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 MED10Q9BTT4 135 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 HAUS2Q9NVX0 235 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 CTTNBP2NLQ9P2B4 639 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 CSADQ9Y600 493 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 GTF2IP78347 998 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 FANCCQ00597 558 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 GADL1Q6ZQY3 521 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 ZNF365Q70YC5 407 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 INTS8Q75QN2 995 aaKnown RBP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 TPH2Q8IWU9 490 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms