RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 CRNKL1Q9BZJ0 848 aaKnown RBP4.46□□□□□ -1.7
ALYREF-201ENST00000504015 XPO4Q9C0E2 1151 aaKnown RBP4.46□□□□□ -1.7
ALYREF-201ENST00000504015 TMX1Q9H3N1 280 aa4.46□□□□□ -1.7
ALYREF-201ENST00000504015 SEC31BQ9NQW1 1179 aa4.46□□□□□ -1.7
ALYREF-201ENST00000504015 AATFQ9NY61 560 aaKnown RBP eCLIP4.46□□□□□ -1.7
ALYREF-201ENST00000504015 IFNKQ9P0W0 207 aa4.46□□□□□ -1.7
ALYREF-201ENST00000504015 CGNQ9P2M7 1197 aaKnown RBP4.46□□□□□ -1.7
ALYREF-201ENST00000504015 FBXO2Q9UK22 296 aaPredicted RBP4.46□□□□□ -1.7
ALYREF-201ENST00000504015 COL24A1Q17RW2 1714 aa4.46□□□□□ -1.7
ALYREF-201ENST00000504015 TNKSO95271 1327 aa4.46□□□□□ -1.7
ALYREF-201ENST00000504015 CACNA1SQ13698 1873 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 CCDC88AQ3V6T2 1871 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 LAMB1P07942 1786 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 MYH13Q9UKX3 1938 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 BTBD18B2RXH4 712 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 ZSCAN12O43309 604 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 PRKAB2O43741 272 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 STX10O60499 249 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 RPS6KA4O75676 772 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 SERPINC1P01008 464 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 CALML3P27482 149 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 HOXA7P31268 230 aaPredicted RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 HIBADHP31937 336 aaKnown RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 KRT2P35908 639 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 GNAQP50148 359 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 TOB1P50616 345 aaPredicted RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 UBASH3AP57075 661 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 RPS8P62241 208 aaKnown RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 TUBB4BP68371 445 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 FAM193AP78312 1265 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 GSTO1P78417 241 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 PDE4BQ07343 736 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 FUT2Q10981 343 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 ITPK1Q13572 414 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 MORC3Q14149 939 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 LONRF3Q496Y0 759 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 IFIT1BQ5T764 474 aaKnown RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 ARL6IP4Q66PJ3 421 aaKnown RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 GALNT17Q6IS24 598 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 TPTE2Q6XPS3 522 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 C15orf52Q6ZUT6 534 aaKnown RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 TMC6Q7Z403 805 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 FILIP1Q7Z7B0 1213 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 METTL16Q86W50 562 aaKnown RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 DGKHQ86XP1 1220 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 SMAP1Q8IYB5 467 aaPredicted RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 C17orf53Q8N3J3 647 aaPredicted RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 MARCH10Q8NA82 808 aaPredicted RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 CTCFLQ8NI51 663 aaPredicted RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 ANKS1AQ92625 1134 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 ERO1AQ96HE7 468 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 C16orf45Q96MC5 204 aaPredicted RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 AIFM3Q96NN9 605 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 CTAGE1Q96RT6 745 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 PHF20Q9BVI0 1012 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 SRRTQ9BXP5 876 aaKnown RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 GTPBP4Q9BZE4 634 aaKnown RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 BCL2L12Q9HB09 334 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 ZNF287Q9HBT7 754 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 SH3GLB2Q9NR46 395 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 TOMM22Q9NS69 142 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 GJB4Q9NTQ9 266 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 RAI14Q9P0K7 980 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 ARPP21Q9UBL0 812 aaPredicted RBP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 NARFQ9UHQ1 456 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 MINPP1Q9UNW1 487 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.45□□□□□ -1.7
ALYREF-201ENST00000504015 LEMD3Q9Y2U8 911 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 PCDHA5Q9Y5H7 936 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 MROH7-TTC4A0A0A0MT08 1334 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 PHLPP2Q6ZVD8 1323 aa4.45□□□□□ -1.7
ALYREF-201ENST00000504015 MYH6P13533 1939 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 MYH14Q7Z406 1995 aaKnown RBP4.44□□□□□ -1.7
ALYREF-201ENST00000504015 MINDY4BA8MYZ0 360 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 POLR2DO15514 142 aaKnown RBP4.44□□□□□ -1.7
ALYREF-201ENST00000504015 ARHGAP6O43182 974 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 SLU7O95391 586 aaKnown RBP4.44□□□□□ -1.7
ALYREF-201ENST00000504015 ADAMTS2O95450 1211 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 MYL1P05976 194 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 LDHCP07864 332 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 TPM1P09493 284 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 SLFN14P0C7P3 912 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 TOP1P11387 765 aaKnown RBP4.44□□□□□ -1.7
ALYREF-201ENST00000504015 ZNF18P17022 549 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 RXRAP19793 462 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 SMARCA1P28370 1054 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 LMOD1P29536 600 aaPredicted RBP4.44□□□□□ -1.7
ALYREF-201ENST00000504015 PLCD1P51178 756 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 PPP4CP60510 307 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 ETF1P62495 437 aaKnown RBP4.44□□□□□ -1.7
ALYREF-201ENST00000504015 TROAPQ12815 778 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 TBX2Q13207 712 aaPredicted RBP4.44□□□□□ -1.7
ALYREF-201ENST00000504015 PNOCQ13519 176 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 TUBB2AQ13885 445 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 CFAP100Q494V2 611 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 ERFEQ4G0M1 354 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 RRP12Q5JTH9 1297 aaKnown RBP4.44□□□□□ -1.7
ALYREF-201ENST00000504015 SPATA1Q5VX52 437 aa4.44□□□□□ -1.7
ALYREF-201ENST00000504015 E4F1Q66K89 784 aaPredicted RBP4.44□□□□□ -1.7
ALYREF-201ENST00000504015 SPECC1LQ69YQ0 1117 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms