RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 MCM9Q9NXL9 1143 aa25.97■■□□□ 1.75
PCDH1-204ENST00000503492 MKRN1Q9UHC7 482 aaKnown RBP25.97■■□□□ 1.75
PCDH1-204ENST00000503492 PLEKHA8P1O95397 391 aa25.96■■□□□ 1.75
PCDH1-204ENST00000503492 SLC3A2P08195 630 aaKnown RBP25.96■■□□□ 1.75
PCDH1-204ENST00000503492 DIXDC1Q155Q3 683 aa25.96■■□□□ 1.75
PCDH1-204ENST00000503492 PKN1Q16512 942 aa25.96■■□□□ 1.75
PCDH1-204ENST00000503492 RBM17Q96I25 401 aaKnown RBP25.96■■□□□ 1.75
PCDH1-204ENST00000503492 NAP1L5Q96NT1 182 aaPredicted RBP25.96■■□□□ 1.75
PCDH1-204ENST00000503492 KIAA1468Q9P260 1216 aa25.96■■□□□ 1.75
PCDH1-204ENST00000503492 IGSF3O75054 1194 aa25.96■■□□□ 1.75
PCDH1-204ENST00000503492 NR5A1Q13285 461 aa25.96■■□□□ 1.75
PCDH1-204ENST00000503492 HPSEQ9Y251 543 aa25.96■■□□□ 1.75
PCDH1-204ENST00000503492 UFL1O94874 794 aa25.95■■□□□ 1.74
PCDH1-204ENST00000503492 PLA2G4DQ86XP0 818 aa25.95■■□□□ 1.74
PCDH1-204ENST00000503492 SH3RF3Q8TEJ3 882 aaPredicted RBP25.95■■□□□ 1.74
PCDH1-204ENST00000503492 CLIC6Q96NY7 704 aa25.95■■□□□ 1.74
PCDH1-204ENST00000503492 RBM28Q9NW13 759 aaKnown RBP25.95■■□□□ 1.74
PCDH1-204ENST00000503492 DDAH1O94760 285 aa25.95■■□□□ 1.74
PCDH1-204ENST00000503492 CALM1P0DP23 149 aa25.95■■□□□ 1.74
PCDH1-204ENST00000503492 CALM2P0DP24 149 aa25.95■■□□□ 1.74
PCDH1-204ENST00000503492 CALM3P0DP25 149 aa25.95■■□□□ 1.74
PCDH1-204ENST00000503492 ATP2B4P23634 1241 aa25.95■■□□□ 1.74
PCDH1-204ENST00000503492 ZNF75DP51815 510 aa25.95■■□□□ 1.74
PCDH1-204ENST00000503492 SLC4A8Q2Y0W8 1093 aa25.95■■□□□ 1.74
PCDH1-204ENST00000503492 OXER1Q8TDS5 423 aa25.95■■□□□ 1.74
PCDH1-204ENST00000503492 PRPF3O43395 683 aaKnown RBP25.94■■□□□ 1.74
PCDH1-204ENST00000503492 AKAP17AQ02040 695 aaKnown RBP25.94■■□□□ 1.74
PCDH1-204ENST00000503492 PDE4BQ07343 736 aa25.94■■□□□ 1.74
PCDH1-204ENST00000503492 TRIM5Q9C035 493 aa25.94■■□□□ 1.74
PCDH1-204ENST00000503492 CD209Q9NNX6 404 aa25.94■■□□□ 1.74
PCDH1-204ENST00000503492 FAM237AA0A1B0GTK4 181 aa25.93■■□□□ 1.74
PCDH1-204ENST00000503492 POLRMTO00411 1230 aaKnown RBP25.93■■□□□ 1.74
PCDH1-204ENST00000503492 KIAA2012Q0VF49 1180 aa25.93■■□□□ 1.74
PCDH1-204ENST00000503492 RESP18Q5W5W9 173 aa25.93■■□□□ 1.74
PCDH1-204ENST00000503492 PROM2Q8N271 834 aa25.93■■□□□ 1.74
PCDH1-204ENST00000503492 hCG_1642624A0A1W2PR95 340 aa25.93■■□□□ 1.74
PCDH1-204ENST00000503492 CUTAO60888 179 aa25.93■■□□□ 1.74
PCDH1-204ENST00000503492 USP5P45974 858 aa25.93■■□□□ 1.74
PCDH1-204ENST00000503492 GSTO1P78417 241 aa25.93■■□□□ 1.74
PCDH1-204ENST00000503492 C12orf60Q5U649 245 aa25.93■■□□□ 1.74
PCDH1-204ENST00000503492 DHX40Q8IX18 779 aaKnown RBP25.93■■□□□ 1.74
PCDH1-204ENST00000503492 GGA1Q9UJY5 639 aa25.93■■□□□ 1.74
PCDH1-204ENST00000503492 EP400Q96L91 3159 aa25.93■■□□□ 1.74
PCDH1-204ENST00000503492 GOLGA6L19H0YKK7 550 aa25.92■■□□□ 1.74
PCDH1-204ENST00000503492 SYKP43405 635 aa25.92■■□□□ 1.74
PCDH1-204ENST00000503492 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.92■■□□□ 1.74
PCDH1-204ENST00000503492 FBXW7Q969H0 707 aa25.92■■□□□ 1.74
PCDH1-204ENST00000503492 VPS54Q9P1Q0 977 aa25.92■■□□□ 1.74
PCDH1-204ENST00000503492 V9GY48 417 aaPredicted RBP25.92■■□□□ 1.74
PCDH1-204ENST00000503492 HOXA10P31260 410 aaPredicted RBP25.92■■□□□ 1.74
PCDH1-204ENST00000503492 PPP4CP60510 307 aa25.92■■□□□ 1.74
PCDH1-204ENST00000503492 RILPL1Q5EBL4 403 aa25.92■■□□□ 1.74
PCDH1-204ENST00000503492 TMTC3Q6ZXV5 915 aa25.92■■□□□ 1.74
PCDH1-204ENST00000503492 CEP57L1Q8IYX8 460 aa25.92■■□□□ 1.74
PCDH1-204ENST00000503492 TIGD1Q96MW7 591 aa25.92■■□□□ 1.74
PCDH1-204ENST00000503492 TSPY2A6NKD2 308 aa25.91■■□□□ 1.74
PCDH1-204ENST00000503492 BBOX1O75936 387 aa25.91■■□□□ 1.74
PCDH1-204ENST00000503492 KCNF1Q9H3M0 494 aa25.91■■□□□ 1.74
PCDH1-204ENST00000503492 GOLGA6L6A8MZA4 724 aa25.91■■□□□ 1.74
PCDH1-204ENST00000503492 TXNRD1Q16881 649 aa25.91■■□□□ 1.74
PCDH1-204ENST00000503492 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.91■■□□□ 1.74
PCDH1-204ENST00000503492 BAG3O95817 575 aa25.9■■□□□ 1.74
PCDH1-204ENST00000503492 IL1R1P14778 569 aa25.9■■□□□ 1.74
PCDH1-204ENST00000503492 RCSD1Q6JBY9 416 aa25.9■■□□□ 1.74
PCDH1-204ENST00000503492 PHF20Q9BVI0 1012 aa25.9■■□□□ 1.74
PCDH1-204ENST00000503492 KRI1Q8N9T8 703 aaKnown RBP25.9■■□□□ 1.74
PCDH1-204ENST00000503492 DYNLL2Q96FJ2 89 aa25.9■■□□□ 1.74
PCDH1-204ENST00000503492 PODXL2Q9NZ53 605 aa25.9■■□□□ 1.74
PCDH1-204ENST00000503492 POLLQ9UGP5 575 aa25.9■■□□□ 1.74
PCDH1-204ENST00000503492 PCDHB6Q9Y5E3 794 aa25.9■■□□□ 1.74
PCDH1-204ENST00000503492 BECN2A8MW95 431 aa25.89■■□□□ 1.74
PCDH1-204ENST00000503492 TPM3P06753 285 aa25.89■■□□□ 1.74
PCDH1-204ENST00000503492 XBP1P17861 261 aa25.89■■□□□ 1.74
PCDH1-204ENST00000503492 DPCR1Q3MIW9 517 aa25.89■■□□□ 1.74
PCDH1-204ENST00000503492 SARM1Q6SZW1 724 aa25.89■■□□□ 1.74
PCDH1-204ENST00000503492 SRBD1Q8N5C6 995 aaKnown RBP25.89■■□□□ 1.74
PCDH1-204ENST00000503492 RTFDC1Q9BY42 306 aaPredicted RBP25.89■■□□□ 1.74
PCDH1-204ENST00000503492 CNTNAP5Q8WYK1 1306 aa25.89■■□□□ 1.74
PCDH1-204ENST00000503492 KLRG2A4D1S0 409 aaPredicted RBP25.89■■□□□ 1.73
PCDH1-204ENST00000503492 LDHCP07864 332 aa25.89■■□□□ 1.73
PCDH1-204ENST00000503492 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.89■■□□□ 1.73
PCDH1-204ENST00000503492 CTCFLQ8NI51 663 aaPredicted RBP25.89■■□□□ 1.73
PCDH1-204ENST00000503492 TGFBRAP1Q8WUH2 860 aa25.89■■□□□ 1.73
PCDH1-204ENST00000503492 PIBF1Q8WXW3 757 aa25.89■■□□□ 1.73
PCDH1-204ENST00000503492 CRAMP1Q96RY5 1269 aa25.89■■□□□ 1.73
PCDH1-204ENST00000503492 CABP5Q9NP86 173 aa25.89■■□□□ 1.73
PCDH1-204ENST00000503492 AOPEPQ8N6M6 819 aa25.88■■□□□ 1.73
PCDH1-204ENST00000503492 TBC1D16Q8TBP0 767 aa25.88■■□□□ 1.73
PCDH1-204ENST00000503492 NAT10Q9H0A0 1025 aaKnown RBP25.88■■□□□ 1.73
PCDH1-204ENST00000503492 TFAP4Q01664 338 aa25.88■■□□□ 1.73
PCDH1-204ENST00000503492 NOL10Q9BSC4 688 aaKnown RBP25.88■■□□□ 1.73
PCDH1-204ENST00000503492 FBXO2Q9UK22 296 aaPredicted RBP25.88■■□□□ 1.73
PCDH1-204ENST00000503492 ROBO3Q96MS0 1386 aa25.88■■□□□ 1.73
PCDH1-204ENST00000503492 BIN1O00499 593 aa25.87■■□□□ 1.73
PCDH1-204ENST00000503492 RBM6P78332 1123 aaKnown RBP25.87■■□□□ 1.73
PCDH1-204ENST00000503492 GRIN1Q05586 938 aa25.87■■□□□ 1.73
PCDH1-204ENST00000503492 IL17RBQ9NRM6 502 aa25.87■■□□□ 1.73
PCDH1-204ENST00000503492 FAM205CA6NFA0 338 aa25.87■■□□□ 1.73
PCDH1-204ENST00000503492 PTGS1P23219 599 aa25.87■■□□□ 1.73
PCDH1-204ENST00000503492 PTPREP23469 700 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms