RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ASNSP08243 561 aa19.75■□□□□ 0.75
SCLT1-204ENST00000503215 PLCD1P51178 756 aa19.75■□□□□ 0.75
SCLT1-204ENST00000503215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.75■□□□□ 0.752e-6■■□□□ 12.4
SCLT1-204ENST00000503215 TRIM34Q9BYJ4 488 aa19.75■□□□□ 0.75
SCLT1-204ENST00000503215 ASCC2Q9H1I8 757 aaPredicted RBP19.75■□□□□ 0.75
SCLT1-204ENST00000503215 ZNF532Q9HCE3 1301 aa19.75■□□□□ 0.75
SCLT1-204ENST00000503215 MAGEB6P1A0A0J9YX57 407 aa19.74■□□□□ 0.75
SCLT1-204ENST00000503215 HLA-DOAP06340 250 aa19.74■□□□□ 0.75
SCLT1-204ENST00000503215 GRK4P32298 578 aa19.74■□□□□ 0.75
SCLT1-204ENST00000503215 BACE1P56817 501 aa19.74■□□□□ 0.75
SCLT1-204ENST00000503215 TTF1Q15361 905 aaPredicted RBP19.74■□□□□ 0.75
SCLT1-204ENST00000503215 TBC1D2Q9BYX2 928 aa19.74■□□□□ 0.75
SCLT1-204ENST00000503215 AS3MTQ9HBK9 375 aa19.74■□□□□ 0.75
SCLT1-204ENST00000503215 GH2P01242 217 aa19.73■□□□□ 0.75
SCLT1-204ENST00000503215 FLT3LGP49771 235 aa19.73■□□□□ 0.75
SCLT1-204ENST00000503215 PRPF38BQ5VTL8 546 aaKnown RBP19.73■□□□□ 0.75
SCLT1-204ENST00000503215 CHMP4BQ9H444 224 aaKnown RBP19.73■□□□□ 0.75
SCLT1-204ENST00000503215 RBBP6Q7Z6E9 1792 aaKnown RBP19.73■□□□□ 0.75
SCLT1-204ENST00000503215 DOCK3Q8IZD9 2030 aa19.73■□□□□ 0.75
SCLT1-204ENST00000503215 ATP5JP18859 108 aa19.72■□□□□ 0.75
SCLT1-204ENST00000503215 TATDN1Q6P1N9 297 aa19.72■□□□□ 0.75
SCLT1-204ENST00000503215 LCORLQ8N3X6 602 aa19.72■□□□□ 0.75
SCLT1-204ENST00000503215 SERPINB13Q9UIV8 391 aa19.72■□□□□ 0.75
SCLT1-204ENST00000503215 LOC285556D6RIA3 1793 aa19.72■□□□□ 0.75
SCLT1-204ENST00000503215 MYH1P12882 1939 aa19.72■□□□□ 0.75
SCLT1-204ENST00000503215 MGAMO43451 1857 aa19.72■□□□□ 0.75
SCLT1-204ENST00000503215 TNPO2O14787 897 aaKnown RBP19.71■□□□□ 0.75
SCLT1-204ENST00000503215 CYP2D6P10635 497 aa19.71■□□□□ 0.75
SCLT1-204ENST00000503215 ELNP15502 786 aa19.71■□□□□ 0.75
SCLT1-204ENST00000503215 SDR42E1Q8WUS8 393 aa19.71■□□□□ 0.75
SCLT1-204ENST00000503215 P2RX7Q99572 595 aaKnown RBP19.71■□□□□ 0.75
SCLT1-204ENST00000503215 EMILIN3Q9NT22 766 aa19.71■□□□□ 0.75
SCLT1-204ENST00000503215 PAG1Q9NWQ8 432 aa19.71■□□□□ 0.75
SCLT1-204ENST00000503215 PNMA3Q9UL41 463 aa19.71■□□□□ 0.75
SCLT1-204ENST00000503215 USP17L10C9JJH3 530 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 PRKAB2O43741 272 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 SHMT1P34896 483 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 FAM110CQ1W6H9 321 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 POTEEQ6S8J3 1075 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 CERS3Q8IU89 383 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 SHISA4Q96DD7 197 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 HAUS7Q99871 368 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 EHD4Q9H223 541 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 ARMT1Q9H993 441 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 TMOD4Q9NZQ9 345 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 BIN2Q9UBW5 565 aaPredicted RBP19.7■□□□□ 0.74
SCLT1-204ENST00000503215 SMIM22K7EJ46 135 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 ADCY3O60266 1144 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 CCL5P13501 91 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 TMED8Q6PL24 325 aaPredicted RBP19.7■□□□□ 0.74
SCLT1-204ENST00000503215 TTC6Q86TZ1 520 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 ACER1Q8TDN7 264 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 LRRCC1Q9C099 1032 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 TXNRD2Q9NNW7 524 aa19.7■□□□□ 0.74
SCLT1-204ENST00000503215 C19orf81C9J6K1 198 aa19.69■□□□□ 0.74
SCLT1-204ENST00000503215 POLR3DP05423 398 aaPredicted RBP19.69■□□□□ 0.74
SCLT1-204ENST00000503215 HOXA7P31268 230 aaPredicted RBP19.69■□□□□ 0.74
SCLT1-204ENST00000503215 GUCY1A2P33402 732 aa19.69■□□□□ 0.74
SCLT1-204ENST00000503215 ADD2P35612 726 aa19.69■□□□□ 0.74
SCLT1-204ENST00000503215 GCLCP48506 637 aaPredicted RBP19.69■□□□□ 0.74
SCLT1-204ENST00000503215 GABPAQ06546 454 aa19.69■□□□□ 0.74
SCLT1-204ENST00000503215 PABPC4Q13310 644 aaKnown RBP eCLIP19.69■□□□□ 0.74
SCLT1-204ENST00000503215 ZYXQ15942 572 aaKnown RBP19.69■□□□□ 0.74
SCLT1-204ENST00000503215 CERKLQ49MI3 558 aaPredicted RBP19.69■□□□□ 0.74
SCLT1-204ENST00000503215 CRNKL1Q9BZJ0 848 aaKnown RBP19.69■□□□□ 0.74
SCLT1-204ENST00000503215 UNC93B1Q9H1C4 597 aa19.69■□□□□ 0.74
SCLT1-204ENST00000503215 DCP1AQ9NPI6 582 aaPredicted RBP19.69■□□□□ 0.74
SCLT1-204ENST00000503215 GINM1Q9NU53 330 aa19.69■□□□□ 0.74
SCLT1-204ENST00000503215 MCM9Q9NXL9 1143 aa19.69■□□□□ 0.74
SCLT1-204ENST00000503215 TAOK2Q9UL54 1235 aa19.69■□□□□ 0.74
SCLT1-204ENST00000503215 MBD4O95243 580 aa19.68■□□□□ 0.74
SCLT1-204ENST00000503215 IRX3P78415 501 aaPredicted RBP19.68■□□□□ 0.74
SCLT1-204ENST00000503215 RAB3GAP1Q15042 981 aa19.68■□□□□ 0.74
SCLT1-204ENST00000503215 ABCB5Q2M3G0 1257 aa19.68■□□□□ 0.74
SCLT1-204ENST00000503215 SLC44A5Q8NCS7 719 aa19.68■□□□□ 0.74
SCLT1-204ENST00000503215 RNF208Q9H0X6 261 aa19.68■□□□□ 0.74
SCLT1-204ENST00000503215 TSHZ3Q63HK5 1081 aa19.67■□□□□ 0.74
SCLT1-204ENST00000503215 USP17L2Q6R6M4 530 aa19.67■□□□□ 0.74
SCLT1-204ENST00000503215 SLAIN1Q8ND83 568 aa19.67■□□□□ 0.74
SCLT1-204ENST00000503215 DCTPP1Q9H773 170 aa19.67■□□□□ 0.74
SCLT1-204ENST00000503215 RBPJLQ9UBG7 517 aa19.67■□□□□ 0.74
SCLT1-204ENST00000503215 MORF4L1Q9UBU8 362 aa19.67■□□□□ 0.74
SCLT1-204ENST00000503215 GJD2Q9UKL4 321 aa19.67■□□□□ 0.74
SCLT1-204ENST00000503215 PCDHB15Q9Y5E8 787 aa19.67■□□□□ 0.74
SCLT1-204ENST00000503215 INHAP05111 366 aa19.66■□□□□ 0.74
SCLT1-204ENST00000503215 HERVK_113P62684 666 aa19.66■□□□□ 0.74
SCLT1-204ENST00000503215 IRF5Q13568 498 aa19.66■□□□□ 0.74
SCLT1-204ENST00000503215 Q3C1V9 767 aa19.66■□□□□ 0.74
SCLT1-204ENST00000503215 COA7Q96BR5 231 aa19.66■□□□□ 0.74
SCLT1-204ENST00000503215 DYNLL2Q96FJ2 89 aa19.66■□□□□ 0.74
SCLT1-204ENST00000503215 DDX60LQ5H9U9 1706 aaKnown RBP19.66■□□□□ 0.74
SCLT1-204ENST00000503215 CYP2D7A0A087X1C5 515 aa19.65■□□□□ 0.74
SCLT1-204ENST00000503215 GJB1P08034 283 aa19.65■□□□□ 0.74
SCLT1-204ENST00000503215 SEPT2Q15019 361 aa19.65■□□□□ 0.74
SCLT1-204ENST00000503215 SLC34A2O95436 690 aa19.64■□□□□ 0.73
SCLT1-204ENST00000503215 GJA8P48165 433 aa19.64■□□□□ 0.73
SCLT1-204ENST00000503215 UBXN2AP68543 259 aa19.64■□□□□ 0.73
SCLT1-204ENST00000503215 PXYLP1Q8TE99 480 aa19.64■□□□□ 0.73
SCLT1-204ENST00000503215 FEZ1Q99689 392 aa19.64■□□□□ 0.73
SCLT1-204ENST00000503215 A0A1W2PRG0 241 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms