RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 TFRCP02786 760 aaKnown RBP7.21□□□□□ -1.26
SPTA1-209ENST00000498708 NEUROD2Q15784 382 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 CCL15Q16663 113 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 PROSER3Q2NL68 480 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 DACT2Q5SW24 774 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 NBPF12Q5TAG4 269 aaPredicted RBP7.21□□□□□ -1.26
SPTA1-209ENST00000498708 PPP2R2DQ66LE6 453 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 FAM109BQ6ICB4 259 aaPredicted RBP7.21□□□□□ -1.26
SPTA1-209ENST00000498708 LRP10Q7Z4F1 713 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 LINC00528Q8N1L1 170 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 PNMA1Q8ND90 353 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 DIS3LQ8TF46 1054 aaKnown RBP7.21□□□□□ -1.26
SPTA1-209ENST00000498708 ZBED3Q96IU2 234 aaPredicted RBP7.21□□□□□ -1.26
SPTA1-209ENST00000498708 PLEKHF1Q96S99 279 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 CDX2Q99626 313 aaPredicted RBP7.21□□□□□ -1.26
SPTA1-209ENST00000498708 ARHGAP9Q9BRR9 750 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 UBE2OQ9C0C9 1292 aaKnown RBP7.21□□□□□ -1.26
SPTA1-209ENST00000498708 ELP3Q9H9T3 547 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 PODXL2Q9NZ53 605 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 BIN2Q9UBW5 565 aaPredicted RBP7.21□□□□□ -1.26
SPTA1-209ENST00000498708 SRRDQ9UH36 339 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 LAS1LQ9Y4W2 734 aaKnown RBP7.21□□□□□ -1.26
SPTA1-209ENST00000498708 SH3TC1Q8TE82 1336 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 TLR2O60603 784 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 GNRH1P01148 92 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 PSMC4P43686 418 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 PRMT2P55345 433 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 RIPK4P57078 832 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 RPS8P62241 208 aaKnown RBP7.2□□□□□ -1.26
SPTA1-209ENST00000498708 KIF22Q14807 665 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 SF3B3Q15393 1217 aaKnown RBP7.2□□□□□ -1.26
SPTA1-209ENST00000498708 KRT24Q2M2I5 525 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 CCDC146Q8IYE0 955 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 OGFOD1Q8N543 542 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 RAET1EQ8TD07 263 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 SNX27Q96L92 541 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.2□□□□□ -1.26
SPTA1-209ENST00000498708 PGPEP1Q9NXJ5 209 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 ANKIB1Q9P2G1 1089 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 GGA1Q9UJY5 639 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 PCDHAC2Q9Y5I4 1007 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 BDP1A6H8Y1 2624 aa7.2□□□□□ -1.26
SPTA1-209ENST00000498708 DLG5Q8TDM6 1919 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 UNCXA6NJT0 531 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 VSIG8P0DPA2 414 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 UBXN2AP68543 259 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 DHX9Q08211 1270 aaKnown RBP7.19□□□□□ -1.26
SPTA1-209ENST00000498708 COPS6Q7L5N1 327 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 PODNQ7Z5L7 613 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 ZBTB33Q86T24 672 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 ANKRD13AQ8IZ07 590 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 ZSCAN1Q8NBB4 408 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 XAGE3Q8WTP9 111 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 LRRN4Q8WUT4 740 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 DEFB118Q96PH6 123 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 FAM117AQ9C073 453 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 SEC31BQ9NQW1 1179 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 GPSM3Q9Y4H4 160 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 DNAH12Q6ZR08 3092 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 SYNGAP1Q96PV0 1343 aa7.19□□□□□ -1.26
SPTA1-209ENST00000498708 SOBPA7XYQ1 873 aa7.18□□□□□ -1.26
SPTA1-209ENST00000498708 IREB2P48200 963 aaKnown RBP7.18□□□□□ -1.26
SPTA1-209ENST00000498708 PTK2Q05397 1052 aa7.18□□□□□ -1.26
SPTA1-209ENST00000498708 C17orf99Q6UX52 265 aa7.18□□□□□ -1.26
SPTA1-209ENST00000498708 NECAB2Q7Z6G3 386 aa7.18□□□□□ -1.26
SPTA1-209ENST00000498708 KIAA0825Q8IV33 1275 aa7.18□□□□□ -1.26
SPTA1-209ENST00000498708 PROCA1Q8NCQ7 364 aaPredicted RBP7.18□□□□□ -1.26
SPTA1-209ENST00000498708 MYLIPQ8WY64 445 aa7.18□□□□□ -1.26
SPTA1-209ENST00000498708 FAM89AQ96GI7 184 aa7.18□□□□□ -1.26
SPTA1-209ENST00000498708 PNNQ9H307 717 aaKnown RBP7.18□□□□□ -1.26
SPTA1-209ENST00000498708 CPA4Q9UI42 421 aa7.18□□□□□ -1.26
SPTA1-209ENST00000498708 GABRQQ9UN88 632 aa7.18□□□□□ -1.26
SPTA1-209ENST00000498708 AOX1Q06278 1338 aa7.18□□□□□ -1.26
SPTA1-209ENST00000498708 MYPNQ86TC9 1320 aa7.18□□□□□ -1.26
SPTA1-209ENST00000498708 COL1A1P02452 1464 aaPredicted RBP7.17□□□□□ -1.26
SPTA1-209ENST00000498708 MGAMO43451 1857 aa7.17□□□□□ -1.26
SPTA1-209ENST00000498708 CLRN2A0PK11 232 aa7.17□□□□□ -1.26
SPTA1-209ENST00000498708 BTBD19C9JJ37 291 aa7.17□□□□□ -1.26
SPTA1-209ENST00000498708 ATP5J2-PTCD1G3V325 749 aa7.17□□□□□ -1.26
SPTA1-209ENST00000498708 AP1G2O75843 785 aa7.17□□□□□ -1.26
SPTA1-209ENST00000498708 GTF2A2P52657 109 aa7.17□□□□□ -1.26
SPTA1-209ENST00000498708 PRKCZQ05513 592 aa7.17□□□□□ -1.26
SPTA1-209ENST00000498708 SUPT20HL1Q3ZLR7 823 aa7.17□□□□□ -1.26
SPTA1-209ENST00000498708 PPP1R26Q5T8A7 1209 aaPredicted RBP7.17□□□□□ -1.26
SPTA1-209ENST00000498708 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.17□□□□□ -1.26
SPTA1-209ENST00000498708 KCTD15Q96SI1 283 aaPredicted RBP7.17□□□□□ -1.26
SPTA1-209ENST00000498708 SEMA6BQ9H3T3 888 aa7.17□□□□□ -1.26
SPTA1-209ENST00000498708 ECM29Q5VYK3 1845 aa7.17□□□□□ -1.26
SPTA1-209ENST00000498708 NCOR1O75376 2440 aa7.17□□□□□ -1.26
SPTA1-209ENST00000498708 COL2A1P02458 1487 aaPredicted RBP7.17□□□□□ -1.26
SPTA1-209ENST00000498708 PIEZO1Q92508 2521 aa7.16□□□□□ -1.26
SPTA1-209ENST00000498708 ELNP15502 786 aa7.16□□□□□ -1.26
SPTA1-209ENST00000498708 HOXD10P28358 340 aa7.16□□□□□ -1.26
SPTA1-209ENST00000498708 TMPOP42166 694 aaKnown RBP7.16□□□□□ -1.26
SPTA1-209ENST00000498708 NR6A1Q15406 480 aa7.16□□□□□ -1.26
SPTA1-209ENST00000498708 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.16□□□□□ -1.26
SPTA1-209ENST00000498708 HSP90AB3PQ58FF7 597 aa7.16□□□□□ -1.26
SPTA1-209ENST00000498708 STRIP1Q5VSL9 837 aa7.16□□□□□ -1.26
SPTA1-209ENST00000498708 USP38Q8NB14 1042 aa7.16□□□□□ -1.26
SPTA1-209ENST00000498708 PAK6Q9NQU5 681 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms