RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 APPP05067 770 aa15.36■□□□□ 0.05
HSPG2-213ENST00000498495 CYP2D6P10635 497 aa15.36■□□□□ 0.05
HSPG2-213ENST00000498495 GNAT2P19087 354 aa15.36■□□□□ 0.05
HSPG2-213ENST00000498495 JAG1P78504 1218 aa15.36■□□□□ 0.05
HSPG2-213ENST00000498495 RILPL2Q969X0 211 aa15.36■□□□□ 0.05
HSPG2-213ENST00000498495 SEC62Q99442 399 aaKnown RBP15.36■□□□□ 0.05
HSPG2-213ENST00000498495 OSBPL3Q9H4L5 887 aa15.36■□□□□ 0.05
HSPG2-213ENST00000498495 MYH7P12883 1935 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 PATL2C9JE40 543 aaKnown RBP15.35■□□□□ 0.05
HSPG2-213ENST00000498495 M0R2C6 588 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 TLR2O60603 784 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 GH2P01242 217 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 SHMT1P34896 483 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 SP3Q02447 781 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 GABPAQ06546 454 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 MOGSQ13724 837 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 ABCB5Q2M3G0 1257 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 ZMYM1Q5SVZ6 1142 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 C12orf60Q5U649 245 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 GPAT2Q6NUI2 795 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 CTU1Q7Z7A3 348 aaKnown RBP15.35■□□□□ 0.05
HSPG2-213ENST00000498495 WDR18Q9BV38 432 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 SWAP70Q9UH65 585 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 TAOK2Q9UL54 1235 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 ZBTB21Q9ULJ3 1066 aa15.35■□□□□ 0.05
HSPG2-213ENST00000498495 LAMB1P07942 1786 aa15.34■□□□□ 0.05
HSPG2-213ENST00000498495 DOCK1Q14185 1865 aa15.34■□□□□ 0.05
HSPG2-213ENST00000498495 GSG1L2A8MUP6 293 aa15.34■□□□□ 0.05
HSPG2-213ENST00000498495 EVX2Q03828 476 aa15.34■□□□□ 0.05
HSPG2-213ENST00000498495 RAB3GAP1Q15042 981 aa15.34■□□□□ 0.05
HSPG2-213ENST00000498495 GIMAP6Q6P9H5 292 aa15.34■□□□□ 0.05
HSPG2-213ENST00000498495 CTR9Q6PD62 1173 aa15.34■□□□□ 0.05
HSPG2-213ENST00000498495 DYNLL2Q96FJ2 89 aa15.34■□□□□ 0.05
HSPG2-213ENST00000498495 MCOLN1Q9GZU1 580 aa15.34■□□□□ 0.05
HSPG2-213ENST00000498495 SIPA1L1O43166 1804 aa15.33■□□□□ 0.05
HSPG2-213ENST00000498495 CYP2D7A0A087X1C5 515 aa15.33■□□□□ 0.04
HSPG2-213ENST00000498495 MINDY4BA8MYZ0 360 aa15.33■□□□□ 0.04
HSPG2-213ENST00000498495 C19orf81C9J6K1 198 aa15.33■□□□□ 0.04
HSPG2-213ENST00000498495 USP17L10C9JJH3 530 aa15.33■□□□□ 0.04
HSPG2-213ENST00000498495 MPHOSPH10O00566 681 aaKnown RBP15.33■□□□□ 0.04
HSPG2-213ENST00000498495 HMGCS2P54868 508 aa15.33■□□□□ 0.04
HSPG2-213ENST00000498495 BACE1P56817 501 aa15.33■□□□□ 0.04
HSPG2-213ENST00000498495 SHROOM1Q2M3G4 852 aaPredicted RBP15.33■□□□□ 0.04
HSPG2-213ENST00000498495 IFFO2Q5TF58 517 aa15.33■□□□□ 0.04
HSPG2-213ENST00000498495 TICAM2Q86XR7 235 aa15.33■□□□□ 0.04
HSPG2-213ENST00000498495 PROCA1Q8NCQ7 364 aaPredicted RBP15.33■□□□□ 0.04
HSPG2-213ENST00000498495 ERO1AQ96HE7 468 aa15.33■□□□□ 0.04
HSPG2-213ENST00000498495 PARK7Q99497 189 aaKnown RBP15.33■□□□□ 0.04
HSPG2-213ENST00000498495 NACAP1Q9BZK3 213 aa15.33■□□□□ 0.04
HSPG2-213ENST00000498495 TMOD4Q9NZQ9 345 aa15.33■□□□□ 0.04
HSPG2-213ENST00000498495 ARPP21Q9UBL0 812 aaPredicted RBP15.33■□□□□ 0.04
HSPG2-213ENST00000498495 TDO2P48775 406 aa15.32■□□□□ 0.04
HSPG2-213ENST00000498495 CDK8P49336 464 aa15.32■□□□□ 0.04
HSPG2-213ENST00000498495 ARHGEF6Q15052 776 aa15.32■□□□□ 0.04
HSPG2-213ENST00000498495 SBK1Q52WX2 424 aa15.32■□□□□ 0.04
HSPG2-213ENST00000498495 SH3D19Q5HYK7 790 aa15.32■□□□□ 0.04
HSPG2-213ENST00000498495 IFNL3Q8IZI9 196 aa15.32■□□□□ 0.04
HSPG2-213ENST00000498495 SLC44A5Q8NCS7 719 aa15.32■□□□□ 0.04
HSPG2-213ENST00000498495 HELLSQ9NRZ9 838 aa15.32■□□□□ 0.04
HSPG2-213ENST00000498495 AGTPBP1Q9UPW5 1226 aa15.32■□□□□ 0.04
HSPG2-213ENST00000498495 SLC45A1Q9Y2W3 748 aa15.32■□□□□ 0.04
HSPG2-213ENST00000498495 CYP2C8P10632 490 aa15.31■□□□□ 0.04
HSPG2-213ENST00000498495 PABPC4Q13310 644 aaKnown RBP eCLIP15.31■□□□□ 0.04
HSPG2-213ENST00000498495 MTMR2Q13614 643 aa15.31■□□□□ 0.04
HSPG2-213ENST00000498495 PKN2Q16513 984 aaKnown RBP15.31■□□□□ 0.04
HSPG2-213ENST00000498495 C17orf99Q6UX52 265 aa15.31■□□□□ 0.04
HSPG2-213ENST00000498495 CD99L2Q8TCZ2 262 aa15.31■□□□□ 0.04
HSPG2-213ENST00000498495 ABHD8Q96I13 439 aa15.31■□□□□ 0.04
HSPG2-213ENST00000498495 CCDC17Q96LX7 622 aa15.31■□□□□ 0.04
HSPG2-213ENST00000498495 CPA4Q9UI42 421 aa15.31■□□□□ 0.04
HSPG2-213ENST00000498495 NAV1Q8NEY1 1877 aa15.31■□□□□ 0.04
HSPG2-213ENST00000498495 SMIM22K7EJ46 135 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 OSBPP22059 807 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 PDE4AP27815 886 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 KIF22Q14807 665 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 SEPT2Q15019 361 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 MCMDC2Q4G0Z9 681 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 TREML2Q5T2D2 321 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 USP17L2Q6R6M4 530 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 CCDC129Q6ZRS4 1044 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 C16orf86Q6ZW13 317 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 STK11IPQ8N1F8 1099 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 SMCR8Q8TEV9 937 aaPredicted RBP15.3■□□□□ 0.04
HSPG2-213ENST00000498495 ATAD5Q96QE3 1844 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 FEZ1Q99689 392 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 NAPBQ9H115 298 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 MKNK2Q9HBH9 465 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 PNMA3Q9UL41 463 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 TRIM17Q9Y577 477 aa15.3■□□□□ 0.04
HSPG2-213ENST00000498495 PHIPQ8WWQ0 1821 aa15.29■□□□□ 0.04
HSPG2-213ENST00000498495 CAPN15O75808 1086 aa15.29■□□□□ 0.04
HSPG2-213ENST00000498495 SDSP20132 328 aa15.29■□□□□ 0.04
HSPG2-213ENST00000498495 TMEM179Q6ZVK1 233 aa15.29■□□□□ 0.04
HSPG2-213ENST00000498495 FAM227BQ96M60 508 aa15.29■□□□□ 0.04
HSPG2-213ENST00000498495 EFCC1Q9HA90 598 aa15.29■□□□□ 0.04
HSPG2-213ENST00000498495 EPB41L4AQ9HCS5 686 aaPredicted RBP15.29■□□□□ 0.04
HSPG2-213ENST00000498495 BAZ2AQ9UIF9 1905 aaKnown RBP15.29■□□□□ 0.04
HSPG2-213ENST00000498495 AKR1B1P15121 316 aa15.28■□□□□ 0.04
HSPG2-213ENST00000498495 GUCY1A2P33402 732 aa15.28■□□□□ 0.04
HSPG2-213ENST00000498495 USP14P54578 494 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms